Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe02g01427 | ATGGGTTCAGTTTGCTGCTGCATGAATGCTGAAGAAATTGAAAATTTTGTGAACTCAAATGGATCTGTTCATAGGAATTGTGCATGTCTTGGTTGCTTCGTCCAAAACTTTTTAAATGTGTATACATCATTATTTCGAAGAGGAGAAATGCATGCTATTTCTTCATCAGTTCAAGGGGCAGCATCTATGGCTTCTACAGCATCATATGACAACTCTATGCCCGATATGTATCATTCTCCTCCAAGGCCATTGCCGTATGATGCTGACCCTAGATATATCCGCTTACAGAGAGATGGACTAGTTTCGAGGCGTGATAAGGGCTCAAGTCACCTTCATGAAGAATCAGAACCTCTGAGAAGTGATGTTGATAGGGCCGAAGAATCATTAAGTGGAGTGGACAAATTGGATTCTGAAGATGAATCTAAAGAGCACATTTATAAATCCTCTCTGAAGATCTCTTCAGTAAAAGCTACAATTGGAGCTGAAAATGTTTACATGCCATCTGAAGATGAGGATGTTTGTCCAACATGCCTGGAAGATTATACACGAGAGAATCCAAAGATAACAACCAAATGTGCTCATCATTTCCACCTTGGGTGCATCTACGAGTGGATGGAGAGAAGTGACAGTTGTCCTGTCTGTGGCAAGGTATCCTCAACTATTCCTCGGCTAAATATTGACTTTATAATTTTATTAATTCAGTTCATTAGTCTACTCAGTTGCTTTTGCATGGGAAACTCATTACCTATATTGGACCATTTTATAGGCTATGGTGTTCGATGA | 783 | 39.72 | MGSVCCCMNAEEIENFVNSNGSVHRNCACLGCFVQNFLNVYTSLFRRGEMHAISSSVQGAASMASTASYDNSMPDMYHSPPRPLPYDADPRYIRLQRDGLVSRRDKGSSHLHEESEPLRSDVDRAEESLSGVDKLDSEDESKEHIYKSSLKISSVKATIGAENVYMPSEDEDVCPTCLEDYTRENPKITTKCAHHFHLGCIYEWMERSDSCPVCGKVSSTIPRLNIDFIILLIQFISLLSCFCMGNSLPILDHFIGYGVR | 260 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 17702522 | 17704967 | + | Bpe009282.1 | Bpe02g01427 | 99576 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe02g01427 | 260 | PANTHER | TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED | 1 | 218 | - | - | |
Bpe02g01427 | 260 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 152 | 220 | IPR013083 | - | |
Bpe02g01427 | 260 | SUPERFAMILY | RING/U-box | 168 | 221 | - | - | |
Bpe02g01427 | 260 | Pfam | Ring finger domain | 173 | 214 | IPR001841 | - | |
Bpe02g01427 | 260 | MobiDBLite | consensus disorder prediction | 103 | 137 | - | - | |
Bpe02g01427 | 260 | ProSiteProfiles | Zinc finger RING-type profile. | 174 | 214 | IPR001841 | - | |
Bpe02g01427 | 260 | SMART | ring_2 | 174 | 214 | IPR001841 | - | |
Bpe02g01427 | 260 | PANTHER | ZINC FINGER, RING/FYVE/PHD-TYPE | 1 | 218 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe02g01427 | Bpe-Chr2:17702522 | Bpe11g00042 | Bpe-Chr11:302999 | 2.61E-108 | dispersed | |
Bpe07g00103 | Bpe-Chr7:741421 | Bpe02g01427 | Bpe-Chr2:17702522 | 6.46E-27 | transposed | |
Bpe11g00660 | Bpe-Chr11:5072254 | Bpe02g01427 | Bpe-Chr2:17702522 | 2.87E-25 | transposed | |
Bpe11g01184 | Bpe-Chr11:8787907 | Bpe02g01427 | Bpe-Chr2:17702522 | 6.14E-103 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe02g01427 | - | - | zju:107416681 | 343.969 |