Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe02g01427 ATGGGTTCAGTTTGCTGCTGCATGAATGCTGAAGAAATTGAAAATTTTGTGAACTCAAATGGATCTGTTCATAGGAATTGTGCATGTCTTGGTTGCTTCGTCCAAAACTTTTTAAATGTGTATACATCATTATTTCGAAGAGGAGAAATGCATGCTATTTCTTCATCAGTTCAAGGGGCAGCATCTATGGCTTCTACAGCATCATATGACAACTCTATGCCCGATATGTATCATTCTCCTCCAAGGCCATTGCCGTATGATGCTGACCCTAGATATATCCGCTTACAGAGAGATGGACTAGTTTCGAGGCGTGATAAGGGCTCAAGTCACCTTCATGAAGAATCAGAACCTCTGAGAAGTGATGTTGATAGGGCCGAAGAATCATTAAGTGGAGTGGACAAATTGGATTCTGAAGATGAATCTAAAGAGCACATTTATAAATCCTCTCTGAAGATCTCTTCAGTAAAAGCTACAATTGGAGCTGAAAATGTTTACATGCCATCTGAAGATGAGGATGTTTGTCCAACATGCCTGGAAGATTATACACGAGAGAATCCAAAGATAACAACCAAATGTGCTCATCATTTCCACCTTGGGTGCATCTACGAGTGGATGGAGAGAAGTGACAGTTGTCCTGTCTGTGGCAAGGTATCCTCAACTATTCCTCGGCTAAATATTGACTTTATAATTTTATTAATTCAGTTCATTAGTCTACTCAGTTGCTTTTGCATGGGAAACTCATTACCTATATTGGACCATTTTATAGGCTATGGTGTTCGATGA 783 39.72 MGSVCCCMNAEEIENFVNSNGSVHRNCACLGCFVQNFLNVYTSLFRRGEMHAISSSVQGAASMASTASYDNSMPDMYHSPPRPLPYDADPRYIRLQRDGLVSRRDKGSSHLHEESEPLRSDVDRAEESLSGVDKLDSEDESKEHIYKSSLKISSVKATIGAENVYMPSEDEDVCPTCLEDYTRENPKITTKCAHHFHLGCIYEWMERSDSCPVCGKVSSTIPRLNIDFIILLIQFISLLSCFCMGNSLPILDHFIGYGVR 260
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 17702522 17704967 + Bpe009282.1 Bpe02g01427 99576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe02g01427 260 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 1 218 - -
Bpe02g01427 260 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 152 220 IPR013083 -
Bpe02g01427 260 SUPERFAMILY RING/U-box 168 221 - -
Bpe02g01427 260 Pfam Ring finger domain 173 214 IPR001841 -
Bpe02g01427 260 MobiDBLite consensus disorder prediction 103 137 - -
Bpe02g01427 260 ProSiteProfiles Zinc finger RING-type profile. 174 214 IPR001841 -
Bpe02g01427 260 SMART ring_2 174 214 IPR001841 -
Bpe02g01427 260 PANTHER ZINC FINGER, RING/FYVE/PHD-TYPE 1 218 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g01427 Bpe-Chr2:17702522 Bpe11g00042 Bpe-Chr11:302999 2.61E-108 dispersed
Bpe07g00103 Bpe-Chr7:741421 Bpe02g01427 Bpe-Chr2:17702522 6.46E-27 transposed
Bpe11g00660 Bpe-Chr11:5072254 Bpe02g01427 Bpe-Chr2:17702522 2.87E-25 transposed
Bpe11g01184 Bpe-Chr11:8787907 Bpe02g01427 Bpe-Chr2:17702522 6.14E-103 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe02g01427 - - zju:107416681 343.969