Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe02g01467 | AGCGCTATCGTTTTGCTTTCGTTGGCTCTGTTGATCCCTACCCTTCATGCTGACATTGCTGAGTTCGATGAGTATTGGCTCCATCGAGCTCAGGAAGCCGAGAAGGCTGCTCTCGAGGCCTACCAACCCGACCCCTTCAACGTCACTGATAACTTCAATATTCATGTCCACAAGGCTGTGGCGGCTGTAGAGGGGGCAAACAGCACAAGGGGGAACCTGAGAAGATCAAACAAACACAAAGGCCCCTGCAAGGCCACCAATCCAATTGACCGGTGCTGGCGGTGCGACAAGAATTGGGCTAAGAATCGAAAACGGCTGGCCAAGTGTGTGCTTGGATTCGGCCGGAAAACGACCGGAGGACTCAAAGGCAAAATTTATGTCGTCACCGACCCATCTGACTCGAATACCCAAAACCCGAAAAAGGGAACTCTCCGCTATGGAGTGATTCAAAAAAAGCCGCTTTGGATCATTTTCAAGCGTAATATGGTCATCAAGCTGTCTAAGGAGCTTATGATAAACAGCCACAAGACAATCGATGCAAGAGGGGTGAAGGTTCATATCGCTCATGGAGCCGGACTGACGATCCAATTTGTGAAGAATGTTATAATTCACGGCCTTCGGATACATGATGTGGTAAAAAAACCAGGTGGAATGATACGAGACTCCATCGAGCATTACGGGCTAAGAACAGCAAGCGATGGAGATGGCATCTCCATTTTTGGAGCGACCAATGTTTGGCTTGATCATCTTTCTATGTGGAACTGCCAAGATGGATTAATCGATGCTGTTCAAGGATCTACAGCCATCACAATCTCAAACTCTCACTTCACCGTTCACAACGATGTGATGCTGTTTGGAGCGAGCGACTCATTCAAAGGGGACAAGATAATGCAGGTGACGGTTGCATTCAACCATTTCGGAAAAGGATTAGTGCAGAGAATGCCACGATGCAGATGGGGATTCTTCCACGTCGTGAACAACGATTACACACACTGGCTAATGTACGCCATCGGGGGAAGCTCCCAACCCACCATCATCAGCCAAGGGAATCGCTTCATCGCACCCCATAATCAGGCAGCAAAGGAGGTAACCAAGAGAGCCTATGCCCCAAAAAGCGTGTGGAAAAACTGGACATGGAGGTCTCAGGGTGACCTTCTAAAGAACGGAGCTTTCTTTGTTCAATCTGGAAAGGCATTTAAGAAAAAGCCATTTGGTAGGCGCGAGATGATCAAGGCTAAGCCCGGGAAGTTTGCGGAGAGGCTTACTCGATTCTCTGGGTCTCTCAGCTGTCAGGTGGGTCGGCCATGC | 1308 | 49.08 | SAIVLLSLALLIPTLHADIAEFDEYWLHRAQEAEKAALEAYQPDPFNVTDNFNIHVHKAVAAVEGANSTRGNLRRSNKHKGPCKATNPIDRCWRCDKNWAKNRKRLAKCVLGFGRKTTGGLKGKIYVVTDPSDSNTQNPKKGTLRYGVIQKKPLWIIFKRNMVIKLSKELMINSHKTIDARGVKVHIAHGAGLTIQFVKNVIIHGLRIHDVVKKPGGMIRDSIEHYGLRTASDGDGISIFGATNVWLDHLSMWNCQDGLIDAVQGSTAITISNSHFTVHNDVMLFGASDSFKGDKIMQVTVAFNHFGKGLVQRMPRCRWGFFHVVNNDYTHWLMYAIGGSSQPTIISQGNRFIAPHNQAAKEVTKRAYAPKSVWKNWTWRSQGDLLKNGAFFVQSGKAFKKKPFGRREMIKAKPGKFAERLTRFSGSLSCQVGRPC | 436 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 17989441 | 17990902 | - | Bpe025143 | Bpe02g01467 | 99616 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe02g01467 | 436 | Pfam | Pectate lyase | 192 | 352 | IPR002022 | - | |
Bpe02g01467 | 436 | PRINTS | Pollen allergen Amb family signature | 377 | 401 | IPR018082 | - | |
Bpe02g01467 | 436 | PRINTS | Pollen allergen Amb family signature | 169 | 185 | IPR018082 | - | |
Bpe02g01467 | 436 | PRINTS | Pollen allergen Amb family signature | 133 | 158 | IPR018082 | - | |
Bpe02g01467 | 436 | PRINTS | Pollen allergen Amb family signature | 313 | 332 | IPR018082 | - | |
Bpe02g01467 | 436 | PRINTS | Pollen allergen Amb family signature | 109 | 126 | IPR018082 | - | |
Bpe02g01467 | 436 | PRINTS | Pollen allergen Amb family signature | 233 | 254 | IPR018082 | - | |
Bpe02g01467 | 436 | PRINTS | Pollen allergen Amb family signature | 335 | 354 | IPR018082 | - | |
Bpe02g01467 | 436 | PRINTS | Pollen allergen Amb family signature | 407 | 430 | IPR018082 | - | |
Bpe02g01467 | 436 | Pfam | Pectate lyase, N terminus | 19 | 73 | IPR007524 | GO:0030570 | |
Bpe02g01467 | 436 | Gene3D | - | 86 | 429 | IPR012334 | - | |
Bpe02g01467 | 436 | PANTHER | PECTATE LYASE 18-RELATED | 3 | 436 | IPR045032 | GO:0030570 | |
Bpe02g01467 | 436 | SUPERFAMILY | Pectin lyase-like | 87 | 426 | IPR011050 | - | |
Bpe02g01467 | 436 | PANTHER | PECTATE LYASE | 3 | 436 | - | - | |
Bpe02g01467 | 436 | SMART | amb_all | 161 | 358 | IPR002022 | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bpe02g01467 | Bpe14g00191 | BCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe02g01467 | Bpe-Chr2:17989441 | Bpe13g00464 | Bpe-Chr13:12165144 | 0 | dispersed | |
Bpe13g01430 | Bpe-Chr13:19581657 | Bpe02g01467 | Bpe-Chr2:17989441 | 0 | wgd | |
Bpe14g00191 | Bpe-Chr14:2222322 | Bpe02g01467 | Bpe-Chr2:17989441 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe02g01467 | K01728 | - | csv:101202789 | 695.656 |