Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe02g01467 AGCGCTATCGTTTTGCTTTCGTTGGCTCTGTTGATCCCTACCCTTCATGCTGACATTGCTGAGTTCGATGAGTATTGGCTCCATCGAGCTCAGGAAGCCGAGAAGGCTGCTCTCGAGGCCTACCAACCCGACCCCTTCAACGTCACTGATAACTTCAATATTCATGTCCACAAGGCTGTGGCGGCTGTAGAGGGGGCAAACAGCACAAGGGGGAACCTGAGAAGATCAAACAAACACAAAGGCCCCTGCAAGGCCACCAATCCAATTGACCGGTGCTGGCGGTGCGACAAGAATTGGGCTAAGAATCGAAAACGGCTGGCCAAGTGTGTGCTTGGATTCGGCCGGAAAACGACCGGAGGACTCAAAGGCAAAATTTATGTCGTCACCGACCCATCTGACTCGAATACCCAAAACCCGAAAAAGGGAACTCTCCGCTATGGAGTGATTCAAAAAAAGCCGCTTTGGATCATTTTCAAGCGTAATATGGTCATCAAGCTGTCTAAGGAGCTTATGATAAACAGCCACAAGACAATCGATGCAAGAGGGGTGAAGGTTCATATCGCTCATGGAGCCGGACTGACGATCCAATTTGTGAAGAATGTTATAATTCACGGCCTTCGGATACATGATGTGGTAAAAAAACCAGGTGGAATGATACGAGACTCCATCGAGCATTACGGGCTAAGAACAGCAAGCGATGGAGATGGCATCTCCATTTTTGGAGCGACCAATGTTTGGCTTGATCATCTTTCTATGTGGAACTGCCAAGATGGATTAATCGATGCTGTTCAAGGATCTACAGCCATCACAATCTCAAACTCTCACTTCACCGTTCACAACGATGTGATGCTGTTTGGAGCGAGCGACTCATTCAAAGGGGACAAGATAATGCAGGTGACGGTTGCATTCAACCATTTCGGAAAAGGATTAGTGCAGAGAATGCCACGATGCAGATGGGGATTCTTCCACGTCGTGAACAACGATTACACACACTGGCTAATGTACGCCATCGGGGGAAGCTCCCAACCCACCATCATCAGCCAAGGGAATCGCTTCATCGCACCCCATAATCAGGCAGCAAAGGAGGTAACCAAGAGAGCCTATGCCCCAAAAAGCGTGTGGAAAAACTGGACATGGAGGTCTCAGGGTGACCTTCTAAAGAACGGAGCTTTCTTTGTTCAATCTGGAAAGGCATTTAAGAAAAAGCCATTTGGTAGGCGCGAGATGATCAAGGCTAAGCCCGGGAAGTTTGCGGAGAGGCTTACTCGATTCTCTGGGTCTCTCAGCTGTCAGGTGGGTCGGCCATGC 1308 49.08 SAIVLLSLALLIPTLHADIAEFDEYWLHRAQEAEKAALEAYQPDPFNVTDNFNIHVHKAVAAVEGANSTRGNLRRSNKHKGPCKATNPIDRCWRCDKNWAKNRKRLAKCVLGFGRKTTGGLKGKIYVVTDPSDSNTQNPKKGTLRYGVIQKKPLWIIFKRNMVIKLSKELMINSHKTIDARGVKVHIAHGAGLTIQFVKNVIIHGLRIHDVVKKPGGMIRDSIEHYGLRTASDGDGISIFGATNVWLDHLSMWNCQDGLIDAVQGSTAITISNSHFTVHNDVMLFGASDSFKGDKIMQVTVAFNHFGKGLVQRMPRCRWGFFHVVNNDYTHWLMYAIGGSSQPTIISQGNRFIAPHNQAAKEVTKRAYAPKSVWKNWTWRSQGDLLKNGAFFVQSGKAFKKKPFGRREMIKAKPGKFAERLTRFSGSLSCQVGRPC 436
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 17989441 17990902 - Bpe025143 Bpe02g01467 99616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe02g01467 436 Pfam Pectate lyase 192 352 IPR002022 -
Bpe02g01467 436 PRINTS Pollen allergen Amb family signature 377 401 IPR018082 -
Bpe02g01467 436 PRINTS Pollen allergen Amb family signature 169 185 IPR018082 -
Bpe02g01467 436 PRINTS Pollen allergen Amb family signature 133 158 IPR018082 -
Bpe02g01467 436 PRINTS Pollen allergen Amb family signature 313 332 IPR018082 -
Bpe02g01467 436 PRINTS Pollen allergen Amb family signature 109 126 IPR018082 -
Bpe02g01467 436 PRINTS Pollen allergen Amb family signature 233 254 IPR018082 -
Bpe02g01467 436 PRINTS Pollen allergen Amb family signature 335 354 IPR018082 -
Bpe02g01467 436 PRINTS Pollen allergen Amb family signature 407 430 IPR018082 -
Bpe02g01467 436 Pfam Pectate lyase, N terminus 19 73 IPR007524 GO:0030570
Bpe02g01467 436 Gene3D - 86 429 IPR012334 -
Bpe02g01467 436 PANTHER PECTATE LYASE 18-RELATED 3 436 IPR045032 GO:0030570
Bpe02g01467 436 SUPERFAMILY Pectin lyase-like 87 426 IPR011050 -
Bpe02g01467 436 PANTHER PECTATE LYASE 3 436 - -
Bpe02g01467 436 SMART amb_all 161 358 IPR002022 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe02g01467 Bpe14g00191 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g01467 Bpe-Chr2:17989441 Bpe13g00464 Bpe-Chr13:12165144 0 dispersed
Bpe13g01430 Bpe-Chr13:19581657 Bpe02g01467 Bpe-Chr2:17989441 0 wgd
Bpe14g00191 Bpe-Chr14:2222322 Bpe02g01467 Bpe-Chr2:17989441 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe02g01467 K01728 - csv:101202789 695.656