Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe02g01492 ATGGCTGCGCTGCCACTTCTCCGTTATGGATCTGTTGATCGCTCCTCCTTATTCTACTCCAATGATTTATCTTCCTCGTTCTGGGGACGAGATTTGTGTCTCGGCTCCAGGTGTAGTTCCAGAGTTAATGTTCAGTATAATGGGAGTTTCCCCAGGGTTTTCGCCATGTCAAATGGCGCACCGTCTCCTTTCAAGATGAACCTCAATGAGTACATGGTTACTCTTGAAAAACCTCTCGGTATTCGCTTCGCTCTTTCCATCGACGGAAAAATATTCGTTCACGCTCTTAAAAGAGGGGGTAATGCTGAGAAGTCAAGGATAATCATGGTGGGAGACACATTGAAGAATGCTAGCGAATCGTCTGGTGGCAAGATCATACAGATCAATGACTTAAGTGATACCCAGAAGATGCTGAAGGAGAAATCAGGATCTTTTAGTCTGATTCTTGAAAGACCCTTTTCTACTTTTCCAATTCAACAGCTTCTATTTAGTGATTTTGACATATTATTCAATAGAGGTCGAGTCCCTATTGCTTCATGGAACAAGAATGTTATAGCACGGGCAACTACCGACAGTGATGGCAATTCTGGGTTTGCTGTGTTTTCCTCAAAGTTTTCAACATTGCAAGGGTGGAATATTTTGAACCAAAACGAGGCTATAAAACCACAAAAGCAGAAGAATTCTCTCTTACCTCCCATAAAACAACTGATCAGTATCTTTTCAGAAGAGGAATCTGGGGATGGAGAGTGGGGTCATGGGAGTTTCCCATTAGAGGAGTATACTAAAGCACTGGATCGGTCGAAAGGCGAACAATACTACAATCACTTTCTTGGTATGCGCTATAGTAAGATTACAGAGCAAATATATGTGGGGTCATGCATACAAACTGAAGCTGATGTGCAGACTTTGGCAAAGATGGGGGTTACTGCTGTTTTGAATTTCCAAAGTGGAATTGATGCAGAAAATTGGGGTATCAATTCTAAGTTAATTAATGAGTCATGTCAAAGATTGGATATCCTAATGGTCAATTATCCAATAAGGGAAGGTAATTCTTATGACTTAAGGAAGAAGCTACCGTTTTGTGTGGGGTTACTATTACGCTTGTTAAAGAAGAGCCACCGTGTTTTTATTACGTGTACTACTGGTTTTGATCGATCTCCATCCTGTGTGATTGCATACCTGCATTGGATGACTGATACTTCCCTTCAGGCAGCATATAATTTTGTTACCAGTTTGCATATATGCAAGCCAGACAGGCCAGCTATTGCTTGGGCTACATGGGATCTCATAGCTCTGGTGGAAAATGGTGGGCACGATGGACCAGCGACACATGCCGTGACCTTTGTGTGGAATGGACAAGAGGGAGAGGAAGTTATTTTGGTTGGAGATTTTACTGGAAATTGGAAGGAACCAGTGAGGGCAACCCACAAGGGAGGGCCAAGATATGAGGTGGAATTGAGGCTTTCACAAGGAAAGTACAACTACAAGTATATAGTAAACGGTCAATGGCGGCATTCAACATCATCACCGGCAGAGAGGGACGAGTGGGGGAACGTCAATAACGTGATTGAAATAGGCGATACTGCCAGTGTTCGACCTGCCAATCAACAGCACAAGAAAAACAACGGTCACTTAGCCAATAAAATTCTCTTTTTTCTGATAAAATCTGCCATTTTTATCAATAACCATAATGCCATAAACTCAGAATATGCCTTCATTTCGCTGTTCTTGCAGTTTATGGTGTTCGCTTGTTCAGACTCGAGGGTCTGCCCTTCTCATGTTTTGAATTTCCAACCCGGGGAGGCTTTTGTCGTTAGAAACGTGGCTAATATTGTTCCTCCCTTCAATAAGCTCAAATACTCAGGACCTGGATCCGCCATTGAATACGCTGTTTTACACCTTAAGGTAGAACAAATTGTGGTGATTGGGCATAGTGCTTGTGGAGGAATCAAGGGGCTGTTGAGCTTCCCAGATGAAGGACCAACATCTACTGACTTCATAGAGGATTGGGTGAAGGTAGTGACACCTGCGAAGAAGAAAGTGCTGGGAAAACATCCCGATGCTCAATTCTCCGAATTATGCGGCCACTGCGAAAGGGAGGCTGTCAATGTTTCCATTGGGCATTTGCTGACCTATCCATTTGTCAGAGATGGCGTCCTGAATAAAACTCTAGCCCTCAAGGGTGGTTACTATGACTTCGTTAAAGGGAGCTTTGAGCTATGGAGTCTTGAATATGGCCTTTCTTCTCCTCTCCACGTATGA 2262 43.28 MAALPLLRYGSVDRSSLFYSNDLSSSFWGRDLCLGSRCSSRVNVQYNGSFPRVFAMSNGAPSPFKMNLNEYMVTLEKPLGIRFALSIDGKIFVHALKRGGNAEKSRIIMVGDTLKNASESSGGKIIQINDLSDTQKMLKEKSGSFSLILERPFSTFPIQQLLFSDFDILFNRGRVPIASWNKNVIARATTDSDGNSGFAVFSSKFSTLQGWNILNQNEAIKPQKQKNSLLPPIKQLISIFSEEESGDGEWGHGSFPLEEYTKALDRSKGEQYYNHFLGMRYSKITEQIYVGSCIQTEADVQTLAKMGVTAVLNFQSGIDAENWGINSKLINESCQRLDILMVNYPIREGNSYDLRKKLPFCVGLLLRLLKKSHRVFITCTTGFDRSPSCVIAYLHWMTDTSLQAAYNFVTSLHICKPDRPAIAWATWDLIALVENGGHDGPATHAVTFVWNGQEGEEVILVGDFTGNWKEPVRATHKGGPRYEVELRLSQGKYNYKYIVNGQWRHSTSSPAERDEWGNVNNVIEIGDTASVRPANQQHKKNNGHLANKILFFLIKSAIFINNHNAINSEYAFISLFLQFMVFACSDSRVCPSHVLNFQPGEAFVVRNVANIVPPFNKLKYSGPGSAIEYAVLHLKVEQIVVIGHSACGGIKGLLSFPDEGPTSTDFIEDWVKVVTPAKKKVLGKHPDAQFSELCGHCEREAVNVSIGHLLTYPFVRDGVLNKTLALKGGYYDFVKGSFELWSLEYGLSSPLHV 753
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 18196124 18204698 - Bpe009345.2 Bpe02g01492 99641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe02g01492 753 CDD E_set_AMPKbeta_like_N 446 525 - -
Bpe02g01492 753 Pfam Glycogen recognition site of AMP-activated protein kinase 446 527 IPR032640 -
Bpe02g01492 753 ProSitePatterns Prokaryotic-type carbonic anhydrases signature 1. 584 591 IPR015892 GO:0004089|GO:0008270|GO:0015976
Bpe02g01492 753 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 272 414 IPR029021 -
Bpe02g01492 753 ProSitePatterns Prokaryotic-type carbonic anhydrases signature 2. 628 648 IPR015892 GO:0004089|GO:0008270|GO:0015976
Bpe02g01492 753 Gene3D Protein tyrosine phosphatase superfamily 273 543 IPR029021 -
Bpe02g01492 753 SUPERFAMILY beta-carbonic anhydrase, cab 578 749 IPR036874 GO:0004089|GO:0008270
Bpe02g01492 753 ProSiteProfiles Dual specificity protein phosphatase domain profile. 280 438 IPR020422 GO:0006470|GO:0008138
Bpe02g01492 753 ProSiteProfiles PDZ domain profile. 72 153 IPR001478 GO:0005515
Bpe02g01492 753 PANTHER PHOSPHOGLUCAN PHOSPHATASE LSF1, CHLOROPLASTIC 24 541 - -
Bpe02g01492 753 PANTHER PHOSPHOGLUCAN PHOSPHATASE LSF1, CHLOROPLASTIC 24 541 IPR030066 GO:0005983
Bpe02g01492 753 SUPERFAMILY E set domains 444 526 IPR014756 -
Bpe02g01492 753 CDD DSP_laforin-like 279 424 IPR045204 GO:0019203|GO:0046838
Bpe02g01492 753 SMART dsp_5 280 435 IPR020422 GO:0006470|GO:0008138
Bpe02g01492 753 SMART Pro_CA_2 578 742 IPR001765 GO:0004089|GO:0008270
Bpe02g01492 753 CDD beta_CA_cladeB 579 741 IPR045066 GO:0004089|GO:0008270
Bpe02g01492 753 SUPERFAMILY PDZ domain-like 50 158 IPR036034 GO:0005515
Bpe02g01492 753 Pfam Carbonic anhydrase 580 737 IPR001765 GO:0004089|GO:0008270
Bpe02g01492 753 Pfam Dual specificity phosphatase, catalytic domain 288 416 IPR000340 GO:0008138|GO:0016311
Bpe02g01492 753 Gene3D Immunoglobulins 433 529 IPR013783 -
Bpe02g01492 753 Gene3D Carbonic anhydrase 568 745 IPR036874 GO:0004089|GO:0008270
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g01492 Bpe-Chr2:18196124 Bpe13g00496 Bpe-Chr13:12370981 3.03E-73 dispersed
Bpe13g01462 Bpe-Chr13:19908098 Bpe02g01492 Bpe-Chr2:18196124 8.55E-77 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe02g01492 - - jre:108992878 803.897