Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe02g01536 ATGGAAGATGAGTCTTTTAGTGTTTTTGTAGACATGGTTGGTCAAAGCTCTATGATTGTTCTACCTCATCTTTCTGTTCAAAACTCCATTGTTGATCCAACTTTATTAGACCTTAATGATCAGAATAATCTTGATCATTTGGCGGTTGGGCTGCCTCTTCCTGTTATTTCATTTTCCAGTCTTCTTCTTCCCCCTCCTGGCTGTATTCTTCCAGAAATTCCTGATAGTTTGCCTGTTTCAGCCATACCATTCCACCCGTTTGAGAGCTCTTGTACCTGTGTCTCCAATGGCGGCTCTAAAGCTTCAGATTCTTCGTTTTCAACTTCAGTGTATCGTGGGTTCGATGAAGCTGTTGATGATTTGAATTTTAAGTGGGAAAGCAACAATGGCCTCTCTTCTTTGCCGGTCGGAACTGGGTTTTCTCCTCATTCTTCTGTTAATCCGACACGATTTCCGGCAATGCGCTCTTCCAATGAAGCTCTTCCTTCTTCGCAGATTCTAATGGGTTCCAAATATCTTTCTGCAATCCAAGAAATTCTCTCTCAAGCTGCTGGTTATTCGCCTGAAAATTTTGACCAACTGGGGTTCTCCACTTCTGCCATTGGATCTACACCACATCCTTCTTCTTTCCTTTCCATCAACGGAATTTCTCAGCCGGATCATGAGCTCATCCCCCAATCAGAAACTCTATTTGATCCTGCACTGCTTAGAACAGCCGATTTGAAGAAAACCCATCTTTTAACTCTCCTCCAATTGGTTGATGATCGATTCAATCAATGCTTGGACGAGATTCATCCTGTTATATTCGCCTTCAAGCAAATTACTGAGTTGGATCCAACTTCATTCACCCATTTTGCGCTGCAGACATTATCTTGTGTGTATAGGAATCTAAGGGAGAGAATCTGTAACTACGTCCTAGCCATGGAAGCTCATTCGAACCCATCTTCATGCACCAAGGAGAAAGAAATATCATTTGAGCAATCATTCTTCCAGAAACAGTGGGATATTCAGCAGCTGAAAAGAAAAGATCACCAGCTATGGAGGCCTCAGAGAGGCTTGCCGGAAAAATCAGTCTCCGTTCTACGCGCCTGGATGTTTCAGAATTTTCTCCATCCGTACCCTAAAGATGCAGAGAAGCATCTGCTTGCTGTAAAAAGTGGATTGACAAGAAGCCAGGTATCCAACTGGTTTATAAATGCTAGAGTCCGGTTGTGGAAGCCGATGATTGAGGAAATGTATGCGGAGATGAACGGAACAAAGTCCATCAATTGCTTAACCCAGTTGAGTATGAACCAGGACAGATTTTGTTAA 1311 42.79 MEDESFSVFVDMVGQSSMIVLPHLSVQNSIVDPTLLDLNDQNNLDHLAVGLPLPVISFSSLLLPPPGCILPEIPDSLPVSAIPFHPFESSCTCVSNGGSKASDSSFSTSVYRGFDEAVDDLNFKWESNNGLSSLPVGTGFSPHSSVNPTRFPAMRSSNEALPSSQILMGSKYLSAIQEILSQAAGYSPENFDQLGFSTSAIGSTPHPSSFLSINGISQPDHELIPQSETLFDPALLRTADLKKTHLLTLLQLVDDRFNQCLDEIHPVIFAFKQITELDPTSFTHFALQTLSCVYRNLRERICNYVLAMEAHSNPSSCTKEKEISFEQSFFQKQWDIQQLKRKDHQLWRPQRGLPEKSVSVLRAWMFQNFLHPYPKDAEKHLLAVKSGLTRSQVSNWFINARVRLWKPMIEEMYAEMNGTKSINCLTQLSMNQDRFC 436
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 18472366 18474047 - Bpe009388.2 Bpe02g01536 99685
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe02g01536 436 SMART HOX_1 347 411 IPR001356 GO:0003677
Bpe02g01536 436 Gene3D - 341 422 - -
Bpe02g01536 436 CDD homeodomain 347 408 IPR001356 GO:0003677
Bpe02g01536 436 ProSiteProfiles 'Homeobox' domain profile. 344 407 IPR001356 GO:0003677
Bpe02g01536 436 SUPERFAMILY Homeodomain-like 348 417 IPR009057 -
Bpe02g01536 436 Pfam Associated with HOX 166 301 IPR006563 -
Bpe02g01536 436 PANTHER HOMEOBOX PROTEIN ATH1 149 421 - -
Bpe02g01536 436 SMART prehox3 161 303 IPR006563 -
Bpe02g01536 436 Pfam Homeobox KN domain 364 403 IPR008422 GO:0003677|GO:0006355
Bpe02g01536 436 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 149 421 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe02g01536 Bpe14g00258 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g01536 Bpe-Chr2:18472366 Bpe03g01193 Bpe-Chr3:30826921 4.01E-51 dispersed
Bpe14g00258 Bpe-Chr14:2688643 Bpe02g01536 Bpe-Chr2:18472366 6.99E-100 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
20983 PF07526 POX 1.20E-21 No_clan Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe02g01536 - - jre:109021085 327.791