Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe02g01539 ATGACTACCTCCACTTGTGGAGGCTCAGACTTGGAACTCTGCCGAGATGACTCGGCTGCTTTCACTCTCAAAGTCATAGCCATGGCTTCCATCCTCATTGCCGGAGTTGCCGGGATAGCCATTCCGCTCGGCGGAAGACACCGAAATTTCCTCAAGGCAGACAGTAATCTCTTCGTAGCTGCAAAGGCCTTTGCTGCTGGTGTGATCCTCTCGACTGGATTCGTCCACATGCTCTCTGGTGGGTCGGAGGCTCTGTCCAGCCCTTGTTTGCCCGCATTTCCTTGGTCCAAGTTTCCATTTCCTGGGTTCTTTGCCATGATTGCAGCTCTTGTGACCCTTTTGGTCGATTTTGTCGGGACTCAGTATTACGAGAGAAAGCAGGGGTTGAATCATTCATACGAGGAGCAGAGTCAGGTTGGAGCATTAGAGGCAGGGCTTCAACAGGAAATTGTCCCAGCCATGGAGGTTAAGGAATGTGATGAGAAAGCTTTACTTGCAAACATGGCTGCTATGTATGCTGTTTATCACGGACCGAGTGGACTTAAAACCATTGCCCATCGAGTTCACGGCCTTGCCGGAGCATTTTCTCTTGGACTGAAGAAACTCGGAACTGTGGAAGTTCAGGGCCTTCCCTTCTTTGACACGGTGAAGGTCAAGTGTGACGATGCTTATGCACTGGCTGATGCTGCTAGGAAGAGTGAGATTAATCTCCGAGTTGTGGACAAAAACACTATCACCGTTGCTTTTGATGAAACGACGACTTTAGACGACGTCGACGCTCTCTTCAGAGTTCCGTTTACATCTGCATCTCTTGCACCGGACGTTCAAAGTGTGATTCCTCCTGGGATAGCTCGGGAGAGCCCATTCCTAACACACCCCATCTTTAACACGTACCACACAGAGCATGAATTATTAAGATATATGCATCAATTACAGTCGAAAGATCTCTCGCTCGAGATGTTCAACGATTTGGGCGAGTTGCTATGTGTCATCACTGGGTTTGACTCCTTCTCGCTGCAGCCTAATGCTGGCGCTGCCAGAGAGTATGCCGGACTGATGGTTATTCGAGCTTATCACTTGGCGAGAGGAGACCATCGTCGGAATGTGTGCATTATTCCGGTTTCGGCACACGGGACCAATCCGGCTAGTGCAGCTATGTGCGGGATGAAAATTGTCCCATTCGGAACTGATTCGAAGGGAAACATCAATATTGAAGAGTTGAAAAAGGCAGCTGAAGCGAACAGAGAGAACTTATCAGCTCTCATGGTCACCTATCCTTCCACACATGGTGTGTATGAAGAAGGGATCGATGAAATATGCAAAATCATCCACGACAATGGCGGCCAAGTGTACATGGACGGAGCGAATATGAATGCCCAGATCAGAATTAGTGAATTCAAAATTCGTAAACATGGGATTTCGTTGTTTGCTCGTGGCTGGTGCGTAACCACTGGTGGAATTCCGGCACCGGAAAAAAAGCAGCCGCTCGGGACCATTTCTGCCGCTCCGTGGGGATCTGCACTTATTTTGCCGATTTCTTACACTTATATCGCAATGATGGGATCGAAGGGTCTCACAGACGCATCGAAGATTGCGATTTTGAATGCAAATTACATGGCGAAGCGATTGGAGGATTATTTCCCCATTCTGTTCCGTGGCGTTAATGGAACTGTCGCGCATGAGTTCATCGTTGATCTGAGAGGATTCAAGGTTATTTTGTTGGTGGGTTTGTTACAGAATACTGCCGGAATCGAGCCGGAAGATGTTGCGAAACGTCTTATGGGCTATGGTTTTCATGCTCCGACAATGTCATGGCCGGAAAGCAAAACTGAGTTGGACAGATTCTGTGATGCTTTGATCTCAATTCGAGAAGAAATCGGACTCATCGAGAAAGGAAAAGCCGACACCCACAACAATGTTCTGAAGATTGGTCCTCATCCACCATCGCTGCTCATGGCCGATGCTTGGACAAAACCATACTCTCGCGAATATGCAGCTTTTCCTGCTCCTTGGCTCCGCACTTCCAAGTTCTGGCCTTCGACTGGTCGTGTGGACAATGTGTACGGCGACAGAAACCTCATCTGCACCCTACTTCCGGCATCCCATGTCGTCGACGAACAAGCTGCTGCCACAGCTTAG 2139 48.85 MTTSTCGGSDLELCRDDSAAFTLKVIAMASILIAGVAGIAIPLGGRHRNFLKADSNLFVAAKAFAAGVILSTGFVHMLSGGSEALSSPCLPAFPWSKFPFPGFFAMIAALVTLLVDFVGTQYYERKQGLNHSYEEQSQVGALEAGLQQEIVPAMEVKECDEKALLANMAAMYAVYHGPSGLKTIAHRVHGLAGAFSLGLKKLGTVEVQGLPFFDTVKVKCDDAYALADAARKSEINLRVVDKNTITVAFDETTTLDDVDALFRVPFTSASLAPDVQSVIPPGIARESPFLTHPIFNTYHTEHELLRYMHQLQSKDLSLEMFNDLGELLCVITGFDSFSLQPNAGAAREYAGLMVIRAYHLARGDHRRNVCIIPVSAHGTNPASAAMCGMKIVPFGTDSKGNINIEELKKAAEANRENLSALMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQIRISEFKIRKHGISLFARGWCVTTGGIPAPEKKQPLGTISAAPWGSALILPISYTYIAMMGSKGLTDASKIAILNANYMAKRLEDYFPILFRGVNGTVAHEFIVDLRGFKVILLVGLLQNTAGIEPEDVAKRLMGYGFHAPTMSWPESKTELDRFCDALISIREEIGLIEKGKADTHNNVLKIGPHPPSLLMADAWTKPYSREYAAFPAPWLRTSKFWPSTGRVDNVYGDRNLICTLLPASHVVDEQAAATA 712
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 18490331 18498274 - Bpe009390.4 Bpe02g01539 99688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe02g01539 712 SUPERFAMILY PLP-dependent transferases 296 697 IPR015424 -
Bpe02g01539 712 Pfam Glycine cleavage system P-protein 159 264 IPR020581 GO:0004375|GO:0006546
Bpe02g01539 712 PANTHER GLYCINE DEHYDROGENASE, DECARBOXYLATING 159 318 IPR020581 GO:0004375|GO:0006546
Bpe02g01539 712 Gene3D - 294 467 IPR015421 GO:0003824
Bpe02g01539 712 PANTHER GLYCINE CLEAVAGE SYSTEM P PROTEIN 319 463 - -
Bpe02g01539 712 PANTHER GLYCINE CLEAVAGE SYSTEM P PROTEIN 159 318 - -
Bpe02g01539 712 PANTHER GLYCINE DEHYDROGENASE, DECARBOXYLATING 319 463 IPR020581 GO:0004375|GO:0006546
Bpe02g01539 712 PANTHER GLYCINE DEHYDROGENASE, DECARBOXYLATING 468 712 IPR020581 GO:0004375|GO:0006546
Bpe02g01539 712 SUPERFAMILY PLP-dependent transferases 164 263 IPR015424 -
Bpe02g01539 712 Coils Coil 401 424 - -
Bpe02g01539 712 PANTHER GLYCINE CLEAVAGE SYSTEM P PROTEIN 468 712 - -
Bpe02g01539 712 Pfam ZIP Zinc transporter 21 138 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Bpe02g01539 712 Gene3D Aspartate Aminotransferase, domain 1 514 649 IPR015422 GO:0003824
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g01539 Bpe-Chr2:18490331 Bpe14g00262 Bpe-Chr14:2721292 2.24E-70 dispersed
Bpe14g00261 Bpe-Chr14:2714914 Bpe02g01539 Bpe-Chr2:18490331 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe02g01539 K00281 - egr:104436298 884.019