Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe02g01543 ATGGGTGGTTCTGGAAAATGGGTTGAAGCTCTTGCAAGTCTCCGGAAGCCAGAGAAAACGGAGCAAAATGAAAAATTGGGTTGTCAAGGCAAGAAATGGAAGCTGTGGAGGAAGTCGTTAGGACAGCTGGGTTTCAGATGGAATGGCCTCAAAACAAGTCATGCAACTGCTTCTGGACGCTGTAACTCGGCTTATATTGCTCCGTTTACGGCTGCAGTTGCTACGCTGGCTCGTGCTCCTCCTCCACATTTCAGGGTCGTCCGGCGAGAATGGGCGGCAACTCGTATCCAAACTGCTTTCCGCGCCTTCTTGGCAAGATGGGCTCTTAGAGCTCTAAAAGGAGTGGTGAGGATTCAAGCTCTAGTCCGGGGCCGACAGGTGAGGAAGCAGGCGGCTGTAACACTAAGGTGCATGCAGGCTCTAGTCCGTGCTGGTCGTGTTCGAAGATCCTCCGAGGGACAGGCTGTGCAGCACATACTAGATCAACGTAGAAGGAACACGGATCTTCTGAGACAAGCAGAGGACGGGTGGTGTTGTGGGAACGGAACATTGGAAGATGTTAAAGCAAATATACAAATGAGGCAAGAAGGTGCTCTCAGAAGAGACAGAGCAGCTGCATATTCACTAACCCAGAAGCAAATAAATTCAAAATCCCAATCACTCTGTTCGGTTTCTCCAAACAACGGGACTGAATTCGACCAGGGATGGAGTCGGCTAGAGCATTGGATTGCGGCAAAGAGATGTGTCCCCTCTACTCTCAAAATAGATCCAGGACCTTGCTCAGTGAGTGTGTGGAAAAACAATCTCACGACCAGAGTTTCAGTAAAACCTCCTCAAATTGGTAAGTTTTCCCTAGCAGATGTTAAGATCGAGAGAAAGAGCAGCGATCGCCCAAATTACATGAACTCGACCAAATCGAGCAAGGGGAAGGTGAAATCGAGCAGTCATTTATCTCAAAAAGTCCAAAGGCGGTCTGTAGATGATCTCCAATTCAGTGAGTTTTGA 1005 48.66 MGGSGKWVEALASLRKPEKTEQNEKLGCQGKKWKLWRKSLGQLGFRWNGLKTSHATASGRCNSAYIAPFTAAVATLARAPPPHFRVVRREWAATRIQTAFRAFLARWALRALKGVVRIQALVRGRQVRKQAAVTLRCMQALVRAGRVRRSSEGQAVQHILDQRRRNTDLLRQAEDGWCCGNGTLEDVKANIQMRQEGALRRDRAAAYSLTQKQINSKSQSLCSVSPNNGTEFDQGWSRLEHWIAAKRCVPSTLKIDPGPCSVSVWKNNLTTRVSVKPPQIGKFSLADVKIERKSSDRPNYMNSTKSSKGKVKSSSHLSQKVQRRSVDDLQFSEF 334
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 18514597 18515977 - Bpe009395.1 Bpe02g01543 99692

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe02g01543 334 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 1 247 - -
Bpe02g01543 334 PANTHER IQ-DOMAIN 5-RELATED 247 282 - -
Bpe02g01543 334 PANTHER IQ-DOMAIN 5-RELATED 1 247 - -
Bpe02g01543 334 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 247 282 - -
Bpe02g01543 334 MobiDBLite consensus disorder prediction 294 334 - -
Bpe02g01543 334 MobiDBLite consensus disorder prediction 299 320 - -
Bpe02g01543 334 Gene3D - 87 140 - -
Bpe02g01543 334 PANTHER IQ-DOMAIN 5-RELATED 294 331 - -
Bpe02g01543 334 Pfam IQ calmodulin-binding motif 113 130 IPR000048 GO:0005515
Bpe02g01543 334 Pfam IQ calmodulin-binding motif 91 106 IPR000048 GO:0005515
Bpe02g01543 334 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 294 331 - -
Bpe02g01543 334 ProSiteProfiles IQ motif profile. 113 140 IPR000048 GO:0005515
Bpe02g01543 334 ProSiteProfiles IQ motif profile. 89 117 IPR000048 GO:0005515
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe02g01543 - - - zju:107420144 323.939
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g01543 Bpe-Chr2:18514597 Bpe04g00122 Bpe-Chr4:834040 2.46E-66 dispersed
Bpe02g00495 Bpe-Chr2:3201970 Bpe02g01543 Bpe-Chr2:18514597 6.27E-91 wgd
Bpe02g01543 Bpe-Chr2:18514597 Bpe06g00782 Bpe-Chr6:18055828 6.86E-48 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi4g85 Blo01g01460 Blo12g01017 Bda01g00627 . Bpe02g01543 . . Bma01g02209 . . . . . . . . . . . . . . . . . . . . . . . . . . Cone20ag0275 . . . . . . . . . . . . . . . . . Car01g01342 . . Cpe02g00266 . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0024903 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bpe02g01543 Bpe_Chr02 FPKM 5.575571 5.474778 6.317436 6.545305 5.695231 6.204938 5.519516 7.050493 6.304057 7.160624