Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe02g01550 | ATGGCTGGTTTGGCACCCGAAGGATCTCAATTTGATGCTCGTCAATATGATAGTAAAATGAACGAATTACTTGGTGGAGAGGCACAGGATTTTTTCACTTCATATGATGAGGTCCACGAAACCTTTGATGCCATGGGTTTGCAGGAGAACCTCTTGAGGGGCATATATGCATATGGTTTTGAAAAGCCATCTGCTATCCAGCAGAGGGGTATTGTTCCCTTCTGCAAGGGAATAGATGTAATTCAACAGGCACAGTCAGGAACTGGGAAAACAGCAACTTTCTGCTCCGGTATTTTGCAGCAGTTGGATTATGGGTTAGTTGAATGCCAGTCATTGGTCCTTGCACCCACCAGAGAACTTGCACAGCAGATTGAGAAGGTTATGCGTGCACTTGGTGACTATCTTGGTGTCAAGGTTCATGCTTGTGTTGGTGGGACAAGTGTTCGTGAAGATCAGCGCATTCTTTCTAGTGGAGTTCATGTTGTTGTCGGTACCCCTGGTCGTGTGTTTGACATGTTGAGGAGACAATCACTTCGACATGATCATATAAAAATGTTTGTGCTTGATGAAGCTGATGAGATGCTTTCGCGTGGTTTCAAGGACCAGATCTATGATATCTTTCAGTTGCTGCCACCAAAAATTCAGGTTGGGGTTTTCTCTGCCACTATGCCACCCGAGGCTCTCGAGATAACAAGGAAGTTCATGAATAAGCCTGTGCGAATTCTAGTAAAAAGAGATGAGCTCACCCTTGAGGGCATTAAGCAATTCCATGTCAATGTTGATAAAGAGGAATGGAAGCTGGACACTTTGTGTGACCTTTATGAAACTTTGGCAATTACCCAAAGTGTCATCTTTGTTAATACTAGGCGGAAGGTTGATTGGCTGACGGACAAAATGCGCAGTCGAGATCACACTGTCTCAGCCACCCATGGCGATATGGATCAAAATACCAGAGATATTATCATGCGGGAGTTCCGATCTGGTTCATCCCGTGTCCTCATCACTACTGATCTCTTGGCTAGAGGTATTGATGTGCAACAAGTCTCTCTTGTGATAAATTATGATCTTCCAACTCAACCAGAGAATTACCTCCATCGAATCGGCCGTAGTGGACGATTTGGGAGAAAGGGGGTAGCCATCAATTTTGTGACATCGGATGATGAAAGAATGCTAGTTGACATCCAGAAGTTCTATAATGTTGTGGTGGAGGAGTTGCCAGCAAATGTGGCCGATCTCCTTTGA | 1242 | 44.61 | MAGLAPEGSQFDARQYDSKMNELLGGEAQDFFTSYDEVHETFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGIDVIQQAQSGTGKTATFCSGILQQLDYGLVECQSLVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSSGVHVVVGTPGRVFDMLRRQSLRHDHIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVDKEEWKLDTLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTSDDERMLVDIQKFYNVVVEELPANVADLL | 413 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 18538790 | 18540472 | - | Bpe009402.1 | Bpe02g01550 | 99699 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe02g01550 | 413 | Gene3D | - | 30 | 248 | IPR027417 | - | |
Bpe02g01550 | 413 | ProSiteProfiles | Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. | 71 | 241 | IPR014001 | - | |
Bpe02g01550 | 413 | SMART | ultradead3 | 59 | 256 | IPR014001 | - | |
Bpe02g01550 | 413 | Gene3D | - | 249 | 413 | IPR027417 | - | |
Bpe02g01550 | 413 | ProSiteProfiles | Superfamilies 1 and 2 helicase C-terminal domain profile. | 252 | 413 | IPR001650 | - | |
Bpe02g01550 | 413 | PANTHER | RNA HELICASE | 22 | 413 | - | - | |
Bpe02g01550 | 413 | Pfam | Helicase conserved C-terminal domain | 266 | 374 | IPR001650 | - | |
Bpe02g01550 | 413 | CDD | SF2_C_DEAD | 253 | 383 | - | - | |
Bpe02g01550 | 413 | ProSitePatterns | DEAD-box subfamily ATP-dependent helicases signature. | 187 | 195 | IPR000629 | - | |
Bpe02g01550 | 413 | ProSiteProfiles | DEAD-box RNA helicase Q motif profile. | 40 | 68 | IPR014014 | GO:0003724 | |
Bpe02g01550 | 413 | CDD | DEADc_EIF4A | 44 | 242 | - | - | |
Bpe02g01550 | 413 | Pfam | DEAD/DEAH box helicase | 65 | 226 | IPR011545 | GO:0003676|GO:0005524 | |
Bpe02g01550 | 413 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 109 | 394 | IPR027417 | - | |
Bpe02g01550 | 413 | SMART | helicmild6 | 293 | 374 | IPR001650 | - | |
Bpe02g01550 | 413 | PANTHER | EUKARYOTIC INITIATION FACTOR 4A-11 | 22 | 413 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe02g01550 | Bpe-Chr2:18538790 | Bpe10g00693 | Bpe-Chr10:13402013 | 0 | dispersed | |
Bpe03g00513 | Bpe-Chr3:25085944 | Bpe02g01550 | Bpe-Chr2:18538790 | 6.23E-180 | transposed | |
Bpe14g00268 | Bpe-Chr14:2747626 | Bpe02g01550 | Bpe-Chr2:18538790 | 0 | wgd | |
Bpe02g01550 | Bpe-Chr2:18538790 | Bpe06g00785 | Bpe-Chr6:18065442 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe02g01550 | K03257 | - | sly:101252510 | 789.26 |