Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe02g01550 ATGGCTGGTTTGGCACCCGAAGGATCTCAATTTGATGCTCGTCAATATGATAGTAAAATGAACGAATTACTTGGTGGAGAGGCACAGGATTTTTTCACTTCATATGATGAGGTCCACGAAACCTTTGATGCCATGGGTTTGCAGGAGAACCTCTTGAGGGGCATATATGCATATGGTTTTGAAAAGCCATCTGCTATCCAGCAGAGGGGTATTGTTCCCTTCTGCAAGGGAATAGATGTAATTCAACAGGCACAGTCAGGAACTGGGAAAACAGCAACTTTCTGCTCCGGTATTTTGCAGCAGTTGGATTATGGGTTAGTTGAATGCCAGTCATTGGTCCTTGCACCCACCAGAGAACTTGCACAGCAGATTGAGAAGGTTATGCGTGCACTTGGTGACTATCTTGGTGTCAAGGTTCATGCTTGTGTTGGTGGGACAAGTGTTCGTGAAGATCAGCGCATTCTTTCTAGTGGAGTTCATGTTGTTGTCGGTACCCCTGGTCGTGTGTTTGACATGTTGAGGAGACAATCACTTCGACATGATCATATAAAAATGTTTGTGCTTGATGAAGCTGATGAGATGCTTTCGCGTGGTTTCAAGGACCAGATCTATGATATCTTTCAGTTGCTGCCACCAAAAATTCAGGTTGGGGTTTTCTCTGCCACTATGCCACCCGAGGCTCTCGAGATAACAAGGAAGTTCATGAATAAGCCTGTGCGAATTCTAGTAAAAAGAGATGAGCTCACCCTTGAGGGCATTAAGCAATTCCATGTCAATGTTGATAAAGAGGAATGGAAGCTGGACACTTTGTGTGACCTTTATGAAACTTTGGCAATTACCCAAAGTGTCATCTTTGTTAATACTAGGCGGAAGGTTGATTGGCTGACGGACAAAATGCGCAGTCGAGATCACACTGTCTCAGCCACCCATGGCGATATGGATCAAAATACCAGAGATATTATCATGCGGGAGTTCCGATCTGGTTCATCCCGTGTCCTCATCACTACTGATCTCTTGGCTAGAGGTATTGATGTGCAACAAGTCTCTCTTGTGATAAATTATGATCTTCCAACTCAACCAGAGAATTACCTCCATCGAATCGGCCGTAGTGGACGATTTGGGAGAAAGGGGGTAGCCATCAATTTTGTGACATCGGATGATGAAAGAATGCTAGTTGACATCCAGAAGTTCTATAATGTTGTGGTGGAGGAGTTGCCAGCAAATGTGGCCGATCTCCTTTGA 1242 44.61 MAGLAPEGSQFDARQYDSKMNELLGGEAQDFFTSYDEVHETFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGIDVIQQAQSGTGKTATFCSGILQQLDYGLVECQSLVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSSGVHVVVGTPGRVFDMLRRQSLRHDHIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVDKEEWKLDTLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTSDDERMLVDIQKFYNVVVEELPANVADLL 413
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 18538790 18540472 - Bpe009402.1 Bpe02g01550 99699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe02g01550 413 Gene3D - 30 248 IPR027417 -
Bpe02g01550 413 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 71 241 IPR014001 -
Bpe02g01550 413 SMART ultradead3 59 256 IPR014001 -
Bpe02g01550 413 Gene3D - 249 413 IPR027417 -
Bpe02g01550 413 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 252 413 IPR001650 -
Bpe02g01550 413 PANTHER RNA HELICASE 22 413 - -
Bpe02g01550 413 Pfam Helicase conserved C-terminal domain 266 374 IPR001650 -
Bpe02g01550 413 CDD SF2_C_DEAD 253 383 - -
Bpe02g01550 413 ProSitePatterns DEAD-box subfamily ATP-dependent helicases signature. 187 195 IPR000629 -
Bpe02g01550 413 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 40 68 IPR014014 GO:0003724
Bpe02g01550 413 CDD DEADc_EIF4A 44 242 - -
Bpe02g01550 413 Pfam DEAD/DEAH box helicase 65 226 IPR011545 GO:0003676|GO:0005524
Bpe02g01550 413 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 109 394 IPR027417 -
Bpe02g01550 413 SMART helicmild6 293 374 IPR001650 -
Bpe02g01550 413 PANTHER EUKARYOTIC INITIATION FACTOR 4A-11 22 413 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g01550 Bpe-Chr2:18538790 Bpe10g00693 Bpe-Chr10:13402013 0 dispersed
Bpe03g00513 Bpe-Chr3:25085944 Bpe02g01550 Bpe-Chr2:18538790 6.23E-180 transposed
Bpe14g00268 Bpe-Chr14:2747626 Bpe02g01550 Bpe-Chr2:18538790 0 wgd
Bpe02g01550 Bpe-Chr2:18538790 Bpe06g00785 Bpe-Chr6:18065442 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe02g01550 K03257 - sly:101252510 789.26