Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe02g01571 | ATGGAATCGGAGGATGCAGTGAAGAGTAAATTGGAGGAATTGCAGAAAGATTTGGGCAGGAAGCTGAAATTAGAAGATGCTATCGCGTCCCTCTTTTCTCTGTTTCGAGATCGATATCCATCTGCCTCTCCGCCTCTCCGAAAATCGTTATATTCTGCGGTATGCCGAGCTGCAACTGTTCTGAAAACGAGGTATACATCCCCTGGTTTTTGGATCGCGGGGCTAGGGCTTTTTGAGCTGGCGCATTCTATGGTTTCTGATTCTTCTGAGAAGCAGCATTTGAAGAATTGTGTTGTCCAAGCTAAGGAAATTTTGAATCAAGTAGAAAACCCCTCTCAATCGCATGAAAATACGCCGCCGAATAGAGGATATCTTTTTGAAGGACATCTGACTGTGGATCCAGAGCCCCCTCAGCCTCAGTGGTTGGTGCAATCAAATCTATTGACTAATGCGGCTACTCTTTTTGAAGCTGAATCTTCTCAAGTTCCATCTGAAAACAATGAGCTATCTGAAACAACTGCCAATGTTATTCAAGCACTCATTGACAACTTAGATAGTGTTTTACCGGAGATATTGGAGAACGATCATATGGCCCCAAGAGCTCCCCCTGCGAGTAAAGAAGTAGTTGCAAACCTTCCTGTCATTATCATTACAGATGAAATTCTTTCCAAGCTAGGAAAAGATGCAGAGTGTGCTATTTGTAAAGATGATTTAGCTGTTAATGACAAGATGCAAGAGTTGCCTTGCAAGCATACATTTCATCCTCCATGTCTAAAACCATGGCTGGATGAGCATAATTCTTGTCCAATCTGTCGTCATGAGTTGCTAACTGATGATCATGCCTATGAGAGCTGGAAGGAACGGGAAAAGGAGGCAGAAGAAGAGAGGAAAGGAGCTGCGAATGCCATTAGAGGTGGTGAATACATGTTGAAGTTTAGTAATTGTATTAAGTGTCCAACACAATGCGTTCTGTAA | 975 | 42.87 | MESEDAVKSKLEELQKDLGRKLKLEDAIASLFSLFRDRYPSASPPLRKSLYSAVCRAATVLKTRYTSPGFWIAGLGLFELAHSMVSDSSEKQHLKNCVVQAKEILNQVENPSQSHENTPPNRGYLFEGHLTVDPEPPQPQWLVQSNLLTNAATLFEAESSQVPSENNELSETTANVIQALIDNLDSVLPEILENDHMAPRAPPASKEVVANLPVIIITDEILSKLGKDAECAICKDDLAVNDKMQELPCKHTFHPPCLKPWLDEHNSCPICRHELLTDDHAYESWKEREKEAEEERKGAANAIRGGEYMLKFSNCIKCPTQCVL | 324 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 18689632 | 18691538 | - | Bpe009420.1 | Bpe02g01571 | 99720 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe02g01571 | 324 | Pfam | Ring finger domain | 230 | 272 | IPR001841 | - | |
Bpe02g01571 | 324 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 192 | 277 | IPR013083 | - | |
Bpe02g01571 | 324 | SMART | ring_2 | 231 | 271 | IPR001841 | - | |
Bpe02g01571 | 324 | ProSiteProfiles | Zinc finger RING-type profile. | 231 | 272 | IPR001841 | - | |
Bpe02g01571 | 324 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE PRAJA | 4 | 306 | - | - | |
Bpe02g01571 | 324 | SUPERFAMILY | RING/U-box | 225 | 278 | - | - | |
Bpe02g01571 | 324 | PANTHER | ABI3-INTERACTING PROTEIN 2-1 | 4 | 306 | - | - | |
Bpe02g01571 | 324 | Coils | Coil | 282 | 302 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe02g01571 | Bpe-Chr2:18689632 | Bpe12g00632 | Bpe-Chr12:11960303 | 1.35E-23 | dispersed | |
Bpe07g00981 | Bpe-Chr7:15551630 | Bpe02g01571 | Bpe-Chr2:18689632 | 4.75E-08 | dispersed | |
Bpe02g01571 | Bpe-Chr2:18689632 | Bpe07g01067 | Bpe-Chr7:16085681 | 2.40E-25 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe02g01571 | K16274 | - | zju:107420142 | 442.58 |