Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe02g01571 ATGGAATCGGAGGATGCAGTGAAGAGTAAATTGGAGGAATTGCAGAAAGATTTGGGCAGGAAGCTGAAATTAGAAGATGCTATCGCGTCCCTCTTTTCTCTGTTTCGAGATCGATATCCATCTGCCTCTCCGCCTCTCCGAAAATCGTTATATTCTGCGGTATGCCGAGCTGCAACTGTTCTGAAAACGAGGTATACATCCCCTGGTTTTTGGATCGCGGGGCTAGGGCTTTTTGAGCTGGCGCATTCTATGGTTTCTGATTCTTCTGAGAAGCAGCATTTGAAGAATTGTGTTGTCCAAGCTAAGGAAATTTTGAATCAAGTAGAAAACCCCTCTCAATCGCATGAAAATACGCCGCCGAATAGAGGATATCTTTTTGAAGGACATCTGACTGTGGATCCAGAGCCCCCTCAGCCTCAGTGGTTGGTGCAATCAAATCTATTGACTAATGCGGCTACTCTTTTTGAAGCTGAATCTTCTCAAGTTCCATCTGAAAACAATGAGCTATCTGAAACAACTGCCAATGTTATTCAAGCACTCATTGACAACTTAGATAGTGTTTTACCGGAGATATTGGAGAACGATCATATGGCCCCAAGAGCTCCCCCTGCGAGTAAAGAAGTAGTTGCAAACCTTCCTGTCATTATCATTACAGATGAAATTCTTTCCAAGCTAGGAAAAGATGCAGAGTGTGCTATTTGTAAAGATGATTTAGCTGTTAATGACAAGATGCAAGAGTTGCCTTGCAAGCATACATTTCATCCTCCATGTCTAAAACCATGGCTGGATGAGCATAATTCTTGTCCAATCTGTCGTCATGAGTTGCTAACTGATGATCATGCCTATGAGAGCTGGAAGGAACGGGAAAAGGAGGCAGAAGAAGAGAGGAAAGGAGCTGCGAATGCCATTAGAGGTGGTGAATACATGTTGAAGTTTAGTAATTGTATTAAGTGTCCAACACAATGCGTTCTGTAA 975 42.87 MESEDAVKSKLEELQKDLGRKLKLEDAIASLFSLFRDRYPSASPPLRKSLYSAVCRAATVLKTRYTSPGFWIAGLGLFELAHSMVSDSSEKQHLKNCVVQAKEILNQVENPSQSHENTPPNRGYLFEGHLTVDPEPPQPQWLVQSNLLTNAATLFEAESSQVPSENNELSETTANVIQALIDNLDSVLPEILENDHMAPRAPPASKEVVANLPVIIITDEILSKLGKDAECAICKDDLAVNDKMQELPCKHTFHPPCLKPWLDEHNSCPICRHELLTDDHAYESWKEREKEAEEERKGAANAIRGGEYMLKFSNCIKCPTQCVL 324
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 18689632 18691538 - Bpe009420.1 Bpe02g01571 99720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe02g01571 324 Pfam Ring finger domain 230 272 IPR001841 -
Bpe02g01571 324 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 192 277 IPR013083 -
Bpe02g01571 324 SMART ring_2 231 271 IPR001841 -
Bpe02g01571 324 ProSiteProfiles Zinc finger RING-type profile. 231 272 IPR001841 -
Bpe02g01571 324 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 4 306 - -
Bpe02g01571 324 SUPERFAMILY RING/U-box 225 278 - -
Bpe02g01571 324 PANTHER ABI3-INTERACTING PROTEIN 2-1 4 306 - -
Bpe02g01571 324 Coils Coil 282 302 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g01571 Bpe-Chr2:18689632 Bpe12g00632 Bpe-Chr12:11960303 1.35E-23 dispersed
Bpe07g00981 Bpe-Chr7:15551630 Bpe02g01571 Bpe-Chr2:18689632 4.75E-08 dispersed
Bpe02g01571 Bpe-Chr2:18689632 Bpe07g01067 Bpe-Chr7:16085681 2.40E-25 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe02g01571 K16274 - zju:107420142 442.58