Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe02g01591 ATGCAACCAACGCCTGCTGGTCGAAGCAGTGGCAGTGGTGGTGGTGGTGTCGGAGGCGGAGGGGAACCGAGTCAGGGGAGCGGACTTGCCCGATTTCGCTCAGCTCCGGCGACCTGGTTAGAAGCACTTTTGGACGAAGAAGATGAAGACCTGTTAAAGCCTAATCAGTGCTTTACCCAACTCCTGTCTAACCACTTGGAAATACCCAGTTCTCAAAAGTCGGTAACTTTTAGTTCATCGGTCGATCAGGGTTTGTTTCAGCTCGATTCGTCGGATGGATTTCTGAGGCAGAACAGTTCGCCGGCCAACTTCCTAGCCAACGGCGGAATCGGGTCTGATGGGTTCTTCCTCAACTCCCGAATTTCAGCTTCCAACGACTTCCCATCGCCGAATATGGTGGTATCTCCAAAGACGTCGAAGCGGGCTAGGGAAGCCGAAATCAAAAGCCTTCATCCAAAATTTGCTGCTCAGCTGAAAGAGGAGCAAAATGTTGAGGTGCTTGGCGGGATTTCAAGCTCCATTGACATGGAGATGGAAAAGCTTCTTGAGGATTCAGTACCTTGCCGAGTCCGTGCAAAGCGCGGTTGTGCTACTCACCCTCGGAGCATTGCAGAAAGGGTTCGAAGAACTCGCATCAGCGACAGGATAAGGAAGCTTCAGGAGCTGGTACCTAACATGGACAAGCAAACAAACACTGCAGATATGCTCGACGAGGCCGTAGAGTATGTCAGGTATCTTCAGAAGCAGATTCAGGAACTGTCGGAACATCAAAGCAGATGCAAATGCGTGGACAAAGAATAG 801 50.94 MQPTPAGRSSGSGGGGVGGGGEPSQGSGLARFRSAPATWLEALLDEEDEDLLKPNQCFTQLLSNHLEIPSSQKSVTFSSSVDQGLFQLDSSDGFLRQNSSPANFLANGGIGSDGFFLNSRISASNDFPSPNMVVSPKTSKRAREAEIKSLHPKFAAQLKEEQNVEVLGGISSSIDMEMEKLLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLDEAVEYVRYLQKQIQELSEHQSRCKCVDKE 266
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 18846029 18848704 - Bpe009438.1 Bpe02g01591 99740
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe02g01591 266 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 199 260 IPR036638 GO:0046983
Bpe02g01591 266 MobiDBLite consensus disorder prediction 1 30 - -
Bpe02g01591 266 SMART finulus 202 252 IPR011598 GO:0046983
Bpe02g01591 266 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 196 246 IPR011598 GO:0046983
Bpe02g01591 266 Pfam Helix-loop-helix DNA-binding domain 201 247 IPR011598 GO:0046983
Bpe02g01591 266 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 16 264 - -
Bpe02g01591 266 Gene3D - 197 265 IPR036638 GO:0046983
Bpe02g01591 266 PANTHER TRANSCRIPTION FACTOR BHLH80 16 264 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g01591 Bpe-Chr2:18846029 Bpe03g01138 Bpe-Chr3:30401401 5.76E-42 dispersed
Bpe14g00315 Bpe-Chr14:3127796 Bpe02g01591 Bpe-Chr2:18846029 3.46E-67 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
20984 PF00010 HLH 1.90E-10 No_clan Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe02g01591 - - dzi:111315792 286.189