Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe02g01596 ATGGTGAAAGAAACTGAGTTTTATGATGTTCTTGGTGTTCTTTCATCGGCGTCTGATGACGAAATTCGCAAGGCTTATTACCTTAAGTTGAGAGCATATTGCATGGGAATGCTTTATCTAATGCAGGCAAGACAAGTTCATCCGGATAAGAATCCGAACGACCCAAAGGCTGCTGAAAAATTTCAGTTATCTAATAAATCATGCAATGGGCAGGTACTTGGGGAAGCTTATCAAGTTTTAAGCGACGCTGTTCAAAGAGACTCCTATGATCGAAATGGAAAACACTGCATCTCTAGGGAAACCATGCTTGATCCAACTGCTGTCTTTGCACTTCTATTTGGAAGTGAATCATTCGAGGATTATATTGGACATTTAGCTGTCGCATCAATGGCTTCTTCTGAATTGTCAAGTGAAAGTGAAAATTTAGAGAGGCTACATGATAAGCTGAAGGCAAGTGCTGTCCAAAAAGAGAGGGAAGAAAAACTAGCAAGATTCCTGAAGGCTTTTCTTACTCAATATGTTCAAGGTGACAAGGAAGGGTTCTTACGCCGTGCTGTATCTGAAGCAAGACGACTTTCTAACACAACTTTTGGAGTCAACATATTAAACACGATTGGCCTTGTATATTCGAGACAGGCAGCTCAAGAGCTCGGAAAGAAAGCCATTTATCTTGGGGTGCCATTTTTGGCGGAATGGGTCCGAAACAAGGGTCATTTTTGGAAGTCGCAGATAACAGCAGCGAAAGGCATGACATTTATAATATCTCTGCTACAACTTCAAGAAGACGTGCGTAAGCAATTTAAAAATGTGCCTGAAAACAATGTTGAATCACACATACGCCTGAATAAAGACACCATGATGAACTCACTGTGGAAGTTAAATGTAGTGGACATAGAAATAACCCTTATACACGTGTGTCAAATGGTGAGTTCTCTGTCTAATCATTTGGATAAATTCTTCTTTATCTGCTTCATAAAGTTTGGCTCAAGTGATGCTTCTCATGCCTTTTTTATACAGGATAAAGTTGGAAAAAATGGTGAATCATCGAGAAGAAAAGGCACTGAAGAAGAAGACGATGAAACCAGTTCCGATAGTAGCGATGAAGAGGAGTCACCTAGAATGCTATCATATCGAACGCCTTTTCTCACACAGGGTATTGGCAGACTCTTCAAATGCCTCTGCAACCCTGCATTTGATGTAGATGATGATGAAATTGTGTACAGAAGCAAATGA 1233 40.23 MVKETEFYDVLGVLSSASDDEIRKAYYLKLRAYCMGMLYLMQARQVHPDKNPNDPKAAEKFQLSNKSCNGQVLGEAYQVLSDAVQRDSYDRNGKHCISRETMLDPTAVFALLFGSESFEDYIGHLAVASMASSELSSESENLERLHDKLKASAVQKEREEKLARFLKAFLTQYVQGDKEGFLRRAVSEARRLSNTTFGVNILNTIGLVYSRQAAQELGKKAIYLGVPFLAEWVRNKGHFWKSQITAAKGMTFIISLLQLQEDVRKQFKNVPENNVESHIRLNKDTMMNSLWKLNVVDIEITLIHVCQMVSSLSNHLDKFFFICFIKFGSSDASHAFFIQDKVGKNGESSRRKGTEEEDDETSSDSSDEEESPRMLSYRTPFLTQGIGRLFKCLCNPAFDVDDDEIVYRSK 410
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 18872701 18875598 - Bpe009442.3 Bpe02g01596 99745

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe02g01596 410 MobiDBLite consensus disorder prediction 345 373 - -
Bpe02g01596 410 SMART dnaj_3 5 85 IPR001623 -
Bpe02g01596 410 CDD DnaJ 6 82 IPR001623 -
Bpe02g01596 410 ProSiteProfiles dnaJ domain profile. 6 93 IPR001623 -
Bpe02g01596 410 Pfam DnaJ domain 39 90 IPR001623 -
Bpe02g01596 410 PRINTS DnaJ domain signature 85 104 IPR001623 -
Bpe02g01596 410 PRINTS DnaJ domain signature 8 26 IPR001623 -
Bpe02g01596 410 PRINTS DnaJ domain signature 39 54 IPR001623 -
Bpe02g01596 410 PRINTS DnaJ domain signature 65 85 IPR001623 -
Bpe02g01596 410 Coils Coil 132 159 - -
Bpe02g01596 410 Gene3D DnaJ domain 1 107 IPR036869 -
Bpe02g01596 410 SUPERFAMILY Chaperone J-domain 2 123 IPR036869 -
Bpe02g01596 410 Pfam X-domain of DnaJ-containing 155 309 IPR026894 -
Bpe02g01596 410 PANTHER DNAJ HEAT SHOCK N-TERMINAL DOMAIN-CONTAINING PROTEIN 1 394 - -
Bpe02g01596 410 PANTHER DNAJ HEAT SHOCK N-TERMINAL DOMAIN-CONTAINING PROTEIN 1 394 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe02g01596 - - - zju:107423466 510.375
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Bpe02g01596 Bpe04g00302 CCT
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g01596 Bpe-Chr2:18872701 Bpe05g00328 Bpe-Chr5:17086588 2.06E-98 dispersed
Bpe02g01596 Bpe-Chr2:18872701 Bpe04g00302 Bpe-Chr4:1934256 1.73E-117 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g1178 . Blo12g00834 . Bda03g00342 . Bpe04g00302 . . Cmo04g02530 Cmo15g00644 . . . . . . Cpe13g00655 Bhi04g01834 . . . . . . . . . . . . . . . Cone17ag0805 Cone20ag0410 . . . Cme03g00430 . Blo18g00226 . Bda01g01383 Bpe02g01596 . Bma01g00878 . . . . . . Car04g02328 Car15g00585 Cpe01g02091 . . . . . . . . . . . . . . . . . Chy03g00571 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0002184 1 3 2 3 3 1 3 1 0 2 1 2 2 1 2 3 0 3 2 1 2 2 2 2 1 3 2 4 2 2 58
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bpe02g01596 Bpe_Chr02 FPKM 11.114395 10.25532 23.564095 25.105871 8.986755 9.117895 9.288975 3.560364 3.481209 3.123811