Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe02g01597 ATGTCTTTAGTTAGATCGACAAAGTCATCCAACACATTACAAAGAATTTCAAACAATTATGCATTGAACGATAGAGATGACAGTTCTGGGTCGACAACCCACATACTCGGCTCTGGTCAGATATCAAAAATGTACTCGGATGACTTTCAGAGTGACAATGGTTACGAGAAGTATTTATTTGATTCCATGGCTGCAGAACTAAACGAAGCTAGTTCATTTTCCTTTGTGAATAGTCAGCCTTTTGATTCTCCATTTGATTCTAGCGGAAATCTCAACCCGTATCATTCAGATTCCGAATCACCTTGTCTGCAAGATTTAATCTCAGATCCTGTCTACTACGATGAAAATCAAATCCGATTACAGCTACAAGAGCTAGAGAGGGTGCTGCTAGGCGAAAACAATGTTGCAGATGATGACATGTTTATCAGCCAAAGCTCAGAAATCAGTACTGAATCGATCGATCCAATTCAGAATGCGTTGACTCAGAATGCGCATGAGGAATTTCCATCCCCAGATTCTCCAAGAACTCCTCAAAAATTGCTCCTAGATTGTGCAGAATTGCTCTCCGAAGGAAACATCGAAGGAGCATCTGGAATGATAAACGAGTTACGACAGATGGTCTCAATCCAAGGAGATCCTCCTCAGAGAATAGCTGCTTACATGGTGGAAGGCCTGGCAGCTCGAATTGCTGCCTCGGGAAAATGTCTTTACAAAGCATTAAAATGCAAAGAGCCTCCATCTTCCGACCGCCTTGCAGCCATGCAGATACTTTTTGAGGTCTGCCCTTGTTTCAAATTCGGGTTCATGGCTGCAAATGGTGCAATCATAGAGGCATCTAAAAACGAAAGCCGAATTCATATTGTAGACTTTGACATAAACCAAGGTACTCAATACATAACCTTGATTCAAATGCTTGCAAATCGACAAGTTGGCAAGTCCCAACACTTCAGATTGACTGGAATTGACGACCCAGAATCCGTTCAAAGATCCATTGGAGGTCTCAAAATAATTGGTCAGAGACTTGAAGAGCTGGCTGAAGTATTAGGGGTCTCGTTTGAGTTCAGAGCAGTGGCCTCTAGGACATCAATAGTCACTCCCTCAATACTGGAGTGCCGTCCTGGTGAAGCACTAATAGTAAACTTTGCTTTTCAACTTCACCACATGCCAGACGAAAGTGTTTCGACGTTAAACCTTCGAGACCAGCTCCTTCGAATGGTAAAGAGCTTGAATCCGAAAGTTGTGACAGTTGTGGAACAAGATGTGAACACCAACACTGCCCCATTTTTTCCAAGATTCATGGAAGCCTACAATTATTATTCTGCAGTGTTCGAATCTCTTGACGCCACACTTCCAAGAGAAAGCCAAGACAGAATGAACGTCGAAAGGCATTGCCTCGCAAGAGACATAGTGAATATAGTTGCGTGTGAGGGAGAGGAAAGAATCGAGCGATATGAAGTTGCAGGAAAATGGAGGGCAAGGCTGACAATGGCTGGTTTCGTCTCGTGTCCAATGAACTCAGACATAATCAAATCAATCAGGGATCTCATTATGGAGTACTGTGAGAGGTACAAAGTGAAGGAGGAAAAGGGAGCTCTTCATTTTGGCTGGCAAGACAAGAGCTTGATCGTTGCTTCTGCGTGGAGGTAA 1647 43.23 MSLVRSTKSSNTLQRISNNYALNDRDDSSGSTTHILGSGQISKMYSDDFQSDNGYEKYLFDSMAAELNEASSFSFVNSQPFDSPFDSSGNLNPYHSDSESPCLQDLISDPVYYDENQIRLQLQELERVLLGENNVADDDMFISQSSEISTESIDPIQNALTQNAHEEFPSPDSPRTPQKLLLDCAELLSEGNIEGASGMINELRQMVSIQGDPPQRIAAYMVEGLAARIAASGKCLYKALKCKEPPSSDRLAAMQILFEVCPCFKFGFMAANGAIIEASKNESRIHIVDFDINQGTQYITLIQMLANRQVGKSQHFRLTGIDDPESVQRSIGGLKIIGQRLEELAEVLGVSFEFRAVASRTSIVTPSILECRPGEALIVNFAFQLHHMPDESVSTLNLRDQLLRMVKSLNPKVVTVVEQDVNTNTAPFFPRFMEAYNYYSAVFESLDATLPRESQDRMNVERHCLARDIVNIVACEGEERIERYEVAGKWRARLTMAGFVSCPMNSDIIKSIRDLIMEYCERYKVKEEKGALHFGWQDKSLIVASAWR 548
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 18877768 18879414 + Bpe009443.1 Bpe02g01597 99746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe02g01597 548 Pfam GRAS domain family 179 548 IPR005202 -
Bpe02g01597 548 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 107 547 IPR030011 GO:0003700|GO:0005634
Bpe02g01597 548 ProSiteProfiles GRAS family profile. 168 548 IPR005202 -
Bpe02g01597 548 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 107 547 IPR005202 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe02g00616 Bpe02g01597 CCT
Bpe02g00616 Bpe02g01597 ECH
Bpe02g01597 Bpe02g00616 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g00616 Bpe-Chr2:4014832 Bpe02g01597 Bpe-Chr2:18877768 0 dispersed
Bpe02g01597 Bpe-Chr2:18877768 Bpe07g00645 Bpe-Chr7:13184194 4.02E-147 dispersed
Bpe02g01597 Bpe-Chr2:18877768 Bpe14g00729 Bpe-Chr14:5656426 2.41E-151 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
20986 PF03514 GRAS 8.90E-133 CL0063 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe02g01597 - - qsu:111984328 712.99