Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe02g01608 ATGGCATTGCAGAATATCGGGGCTTCTAACCGTGATGATGCGTTTTATAGATATAAGATGCCTAAAATGATTACCAAAATTGAAGGCAGAGGTAATGGCATAAAGACCAATGTGGTTAACATGGTTGAGATAGCAAAGGCATTGGCTAGGCCTGCTTCTTACACTACTAAGTTTTTTGGCTGTGAGCTTGGAGCACAGTCCAAGTTTGATGAAAAGACTGGCACTTCTTTGGTGAATGGCGCTCATGACACTGCAAAGCTTGCCAGTCTCCTTGAGAACTTCATCAAGAAATATGTTCAATGCTATGGTTGTGGGAACCCTGAAACTGAAATTATCATCACAAAGACACAGATGATCCAACTGAAATGTGCTGCATGTGGGTTTGTTTCAGATGTTGACATGAGGTGCAAGCTTACAACATTTATTCTCAAGAATCCCCCCGAGTCTAAGAAGTCATCTAAAGACAAGAAAGCCATGAGGAGGGCTGAGAAGGAGCGACTCAAGGAGGGCGAGGCTGTTGATGAGGAGCAGAAGAAGCTGAAGAAAGAGGCAGTGAAGAAGAAAAGCACCTCTGGTAGCACAAAGGAAGTTGGGGTTTCCAGAACATCAAGTAAGAAGAGAAGTAATGGTTCTGATGAGGAACATTCTCCAGCTCACAGTCATTCTGATGATAATGACCAAGCAGATGGTGATGATGACGATGGTAATGATGTTCAGTGGCAGACAGACACATCATTGGAGGCTGCTAGGCAGCGTATCCAGGAGCAGTTGAGTGCTGTTACTGCTGATATGGTGATGCTTACATCTGAGGAAGAAAAGCAGAAGTCGAAGAAACCTCCAGAACAGGAAAAGGTATCTCCGTCTGATGGGCAGCTGAATGGAAATGGTGTCTCTGCCCATGAAAAGCTTGTTAATGAAATAAAGGCATACCTAAAAAAAGGTTCTACAGCAGCCCAGCTCAAAGCGTTTTTGAATTCATTGGCTGGTACTCCACAAGAAGTCATGGATGCTCTTTTCGAAGCACTATTTGAAGGTGCTGGAAAGGGTTTTTCTAAAGATGTGGTAAAAAAGAAGAGCTACCTTGCCGCAGCTGTACAAGAGGAGGGATCTCAGACAGTTTTGTTGGGTGCCATCGAGACCTTCTGTCTGAAGGCTAACCCTGAAGCAGCGCTAGAGGTGGCGCTGGTTTTGAAAGCCCTCTATGACAATGATTTTGTAGAGGAAGAGTTTATAGTTGCGTGGTACCAGCAGGGTCTGAAAGGCAGCAATAAGAGTTCTCCGATGTGGAAGAATGTGAAACCCTTCATCGAGTGGCTGCAGAGTGCTGAGTCAGAGTCTGAAGACGAGTGA 1350 44.81 MALQNIGASNRDDAFYRYKMPKMITKIEGRGNGIKTNVVNMVEIAKALARPASYTTKFFGCELGAQSKFDEKTGTSLVNGAHDTAKLASLLENFIKKYVQCYGCGNPETEIIITKTQMIQLKCAACGFVSDVDMRCKLTTFILKNPPESKKSSKDKKAMRRAEKERLKEGEAVDEEQKKLKKEAVKKKSTSGSTKEVGVSRTSSKKRSNGSDEEHSPAHSHSDDNDQADGDDDDGNDVQWQTDTSLEAARQRIQEQLSAVTADMVMLTSEEEKQKSKKPPEQEKVSPSDGQLNGNGVSAHEKLVNEIKAYLKKGSTAAQLKAFLNSLAGTPQEVMDALFEALFEGAGKGFSKDVVKKKSYLAAAVQEEGSQTVLLGAIETFCLKANPEAALEVALVLKALYDNDFVEEEFIVAWYQQGLKGSNKSSPMWKNVKPFIEWLQSAESESEDE 449
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 18974341 18975690 + Bpe009454.1 Bpe02g01608 99757
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe02g01608 449 SUPERFAMILY Zinc-binding domain of translation initiation factor 2 beta 98 133 IPR016190 GO:0003743|GO:0006413
Bpe02g01608 449 Gene3D - 105 145 - -
Bpe02g01608 449 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 1 449 IPR045196 GO:0003743|GO:0006413
Bpe02g01608 449 MobiDBLite consensus disorder prediction 269 297 - -
Bpe02g01608 449 SMART eIF2Bneu4 15 129 IPR002735 GO:0003743|GO:0006413
Bpe02g01608 449 SUPERFAMILY ARM repeat 299 443 IPR016024 -
Bpe02g01608 449 MobiDBLite consensus disorder prediction 147 239 - -
Bpe02g01608 449 Coils Coil 159 179 - -
Bpe02g01608 449 Gene3D - 2 104 - -
Bpe02g01608 449 SMART 542_3 358 445 IPR003307 GO:0005515
Bpe02g01608 449 MobiDBLite consensus disorder prediction 269 284 - -
Bpe02g01608 449 ProSiteProfiles W2 domain profile. 271 449 IPR003307 GO:0005515
Bpe02g01608 449 MobiDBLite consensus disorder prediction 148 190 - -
Bpe02g01608 449 MobiDBLite consensus disorder prediction 200 226 - -
Bpe02g01608 449 CDD W2_eIF5 298 447 - -
Bpe02g01608 449 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 5-1-RELATED 1 449 - -
Bpe02g01608 449 Pfam Domain found in IF2B/IF5 11 127 IPR002735 GO:0003743|GO:0006413
Bpe02g01608 449 Gene3D - 295 440 - -
Bpe02g01608 449 Pfam eIF4-gamma/eIF5/eIF2-epsilon 371 449 IPR003307 GO:0005515
Bpe02g01608 449 SUPERFAMILY Translation initiation factor 2 beta, aIF2beta, N-terminal domain 10 101 IPR016189 GO:0003743|GO:0006413
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g01608 Bpe-Chr2:18974341 Bpe05g00168 Bpe-Chr5:5462415 1.14E-08 dispersed
Bpe14g00346 Bpe-Chr14:3320457 Bpe02g01608 Bpe-Chr2:18974341 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe02g01608 K03262 - mnt:21398051 624.009