Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe02g01612 | ATGCATGGGCAGGTTCAAAGACGTTTGATCCAAAACCGTGTAGCTGCTCGTAAAAGTCGTCAAAGGAAAAAGGCATACGTCCAACATTTAGAAACTAGCCGTTTGAAGCTAGCACAGTTGGAGCAAGAACTGGTGAGAGTCCAACAGCAGGGTCTATACACAGGCAATGTAATGGACTCAGGATTATGTGGAACAGTAAACCCAGTGATTGCTGAATTTGAAATGGAATATACAATTTGGGTTGGAGAGCAACAGAGACAGGACAGTGGGCTTCGTGATGCATTGCAAGCTCAAGCAACTGATCTACAGCTTCACACACTTGTAGACAGTGCCTTGAATCACTACAACAATCTTTTTCGCATGAAATCAGATGCTGCAAAAGGTGATGTTTTCTACTTGTTGTCTGGCTTGTGGAGAACAACAGCTGAACGCTTTTTCCTATGGCTTGGAGGATTCCGCCCATCTCAGCTTCTAAATGTTCTCATGCCACATTTTGGACCCTTAACTGATGAACAAGTATTGCATATTAGTAATTTGCGACAATCATCTCAAGAAGCTGAGTATGCTCTCTCACAGGGAATGGATCAACTACATCAAGCTATATTGCAAAGCGTCTCAACAGATCTCCTAAGTTCAGGAAGTTTTTCTTTCCAGATGGATGATCCAATGGAGAAGTTTGAAACACTGGAGAATTTCGTGAGCCAGCTTATTGCACTCTGTACACAGGCAGACCATCTTCGGCAACAGACCCTCCAGCGGGTGTCTCGCATCCTAATGACAGAGCAAGCAGCTCGAGGCCTGCTTGCCTTAGGAGAGTACTTTCACCGCCTCCGTGCTCTTAGTTCTGTTTGGACTGCCCGTCCTCATGAACCCACTATGTAG | 882 | 45.12 | MHGQVQRRLIQNRVAARKSRQRKKAYVQHLETSRLKLAQLEQELVRVQQQGLYTGNVMDSGLCGTVNPVIAEFEMEYTIWVGEQQRQDSGLRDALQAQATDLQLHTLVDSALNHYNNLFRMKSDAAKGDVFYLLSGLWRTTAERFFLWLGGFRPSQLLNVLMPHFGPLTDEQVLHISNLRQSSQEAEYALSQGMDQLHQAILQSVSTDLLSSGSFSFQMDDPMEKFETLENFVSQLIALCTQADHLRQQTLQRVSRILMTEQAARGLLALGEYFHRLRALSSVWTARPHEPTM | 293 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 18997876 | 18999969 | - | Bpe009459.1 | Bpe02g01612 | 99761 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe02g01612 | 293 | Pfam | Seed dormancy control | 90 | 162 | IPR025422 | GO:0006351|GO:0043565 | |
Bpe02g01612 | 293 | PANTHER | TRANSCRIPTION FACTOR TGA7 | 3 | 291 | - | - | |
Bpe02g01612 | 293 | PANTHER | TRANSCRIPTION FACTOR TGA9 | 3 | 291 | - | - | |
Bpe02g01612 | 293 | Gene3D | - | 4 | 53 | - | - | |
Bpe02g01612 | 293 | SMART | brlzneu | 4 | 63 | IPR004827 | GO:0003700|GO:0006355 | |
Bpe02g01612 | 293 | ProSitePatterns | Basic-leucine zipper (bZIP) domain signature. | 7 | 22 | IPR004827 | GO:0003700|GO:0006355 | |
Bpe02g01612 | 293 | ProSiteProfiles | DOG1 domain profile. | 70 | 287 | IPR025422 | GO:0006351|GO:0043565 | |
Bpe02g01612 | 293 | Pfam | bZIP transcription factor | 4 | 37 | IPR004827 | GO:0003700|GO:0006355 | |
Bpe02g01612 | 293 | SUPERFAMILY | Leucine zipper domain | 5 | 45 | IPR046347 | GO:0003700|GO:0006355 | |
Bpe02g01612 | 293 | Coils | Coil | 23 | 50 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe02g01612 | Bpe-Chr2:18997876 | Bpe15g00444 | Bpe-Chr15:15907624 | 1.22E-99 | dispersed | |
Bpe11g00260 | Bpe-Chr11:1888291 | Bpe02g01612 | Bpe-Chr2:18997876 | 8.25E-06 | dispersed | |
Bpe14g00350 | Bpe-Chr14:3354103 | Bpe02g01612 | Bpe-Chr2:18997876 | 5.90E-131 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
20988 | PF14144 | DOG1 | 5.40E-28 | No_clan | Bpe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe02g01612 | K14431 | - | vvi:100255706 | 372.089 |