Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe02g01612 ATGCATGGGCAGGTTCAAAGACGTTTGATCCAAAACCGTGTAGCTGCTCGTAAAAGTCGTCAAAGGAAAAAGGCATACGTCCAACATTTAGAAACTAGCCGTTTGAAGCTAGCACAGTTGGAGCAAGAACTGGTGAGAGTCCAACAGCAGGGTCTATACACAGGCAATGTAATGGACTCAGGATTATGTGGAACAGTAAACCCAGTGATTGCTGAATTTGAAATGGAATATACAATTTGGGTTGGAGAGCAACAGAGACAGGACAGTGGGCTTCGTGATGCATTGCAAGCTCAAGCAACTGATCTACAGCTTCACACACTTGTAGACAGTGCCTTGAATCACTACAACAATCTTTTTCGCATGAAATCAGATGCTGCAAAAGGTGATGTTTTCTACTTGTTGTCTGGCTTGTGGAGAACAACAGCTGAACGCTTTTTCCTATGGCTTGGAGGATTCCGCCCATCTCAGCTTCTAAATGTTCTCATGCCACATTTTGGACCCTTAACTGATGAACAAGTATTGCATATTAGTAATTTGCGACAATCATCTCAAGAAGCTGAGTATGCTCTCTCACAGGGAATGGATCAACTACATCAAGCTATATTGCAAAGCGTCTCAACAGATCTCCTAAGTTCAGGAAGTTTTTCTTTCCAGATGGATGATCCAATGGAGAAGTTTGAAACACTGGAGAATTTCGTGAGCCAGCTTATTGCACTCTGTACACAGGCAGACCATCTTCGGCAACAGACCCTCCAGCGGGTGTCTCGCATCCTAATGACAGAGCAAGCAGCTCGAGGCCTGCTTGCCTTAGGAGAGTACTTTCACCGCCTCCGTGCTCTTAGTTCTGTTTGGACTGCCCGTCCTCATGAACCCACTATGTAG 882 45.12 MHGQVQRRLIQNRVAARKSRQRKKAYVQHLETSRLKLAQLEQELVRVQQQGLYTGNVMDSGLCGTVNPVIAEFEMEYTIWVGEQQRQDSGLRDALQAQATDLQLHTLVDSALNHYNNLFRMKSDAAKGDVFYLLSGLWRTTAERFFLWLGGFRPSQLLNVLMPHFGPLTDEQVLHISNLRQSSQEAEYALSQGMDQLHQAILQSVSTDLLSSGSFSFQMDDPMEKFETLENFVSQLIALCTQADHLRQQTLQRVSRILMTEQAARGLLALGEYFHRLRALSSVWTARPHEPTM 293
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 18997876 18999969 - Bpe009459.1 Bpe02g01612 99761
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe02g01612 293 Pfam Seed dormancy control 90 162 IPR025422 GO:0006351|GO:0043565
Bpe02g01612 293 PANTHER TRANSCRIPTION FACTOR TGA7 3 291 - -
Bpe02g01612 293 PANTHER TRANSCRIPTION FACTOR TGA9 3 291 - -
Bpe02g01612 293 Gene3D - 4 53 - -
Bpe02g01612 293 SMART brlzneu 4 63 IPR004827 GO:0003700|GO:0006355
Bpe02g01612 293 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 7 22 IPR004827 GO:0003700|GO:0006355
Bpe02g01612 293 ProSiteProfiles DOG1 domain profile. 70 287 IPR025422 GO:0006351|GO:0043565
Bpe02g01612 293 Pfam bZIP transcription factor 4 37 IPR004827 GO:0003700|GO:0006355
Bpe02g01612 293 SUPERFAMILY Leucine zipper domain 5 45 IPR046347 GO:0003700|GO:0006355
Bpe02g01612 293 Coils Coil 23 50 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g01612 Bpe-Chr2:18997876 Bpe15g00444 Bpe-Chr15:15907624 1.22E-99 dispersed
Bpe11g00260 Bpe-Chr11:1888291 Bpe02g01612 Bpe-Chr2:18997876 8.25E-06 dispersed
Bpe14g00350 Bpe-Chr14:3354103 Bpe02g01612 Bpe-Chr2:18997876 5.90E-131 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
20988 PF14144 DOG1 5.40E-28 No_clan Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe02g01612 K14431 - vvi:100255706 372.089