Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe02g01617 ATGGGTTCTCTTTCGACTGAGAGTTCGAACGTGGAGAAAGAAGGAAGCCATGTTCATGTTGGCACTGAAGGTAGAGCAGGGAAGCTTCAATGGCTTCTGGATAGTCCAGAACCTCCCTCTGCGTGGCATGAGTTCATTGGTTGTCTCAAAGAAGCTTTCGTTCCTCGTAGCAACAGACCTTCTTCTTCAGAGAAGCAGAAAGTATCTCTGCGTGTTTTTTCAGTCTTAAGAGGTGTTTTTCCGATTCTTAGTTGGGGAAGAAACTACAAGGCTTCCAAGTTTCGGAGTGATCTAATGGCCGGTTTAACTCTAGCAAGCCTTAGCATTCCTCAGGTTCTCACTCTCTCTAACTCTTTCTCACTCTCTCTAACTCTTTCTTTCTCTCTCTATAATTATGATGTTCTGCAGAGTATTGGGTATGCTAATTTGGCGAAGCTTGATCCACAGTATGGTTTATACACAAGCGTTGTTCCACCATTGATCTATTCATTACTGGGAAGTTCAAGGGAGCTAGCAATAGGACCAGTGGCTGTGGTTTCTTTGCTTTTATCCTCCATGCTTGAGAAAATTCAAGACCCTTTTGCAGACCCGATTGCCTACAGAAAACTCGTCTTCACCGTCACTTTCTTTGCTGGATCATTTCAAGCAGCGTTTGGATTATTTAGGTTGGGGTTTTTAGTGAATTTTCTTTCGCATGCTGCAATTGTTGGATTCATGGGAGGAGCCGCCATTGTTATAGGCCTTCAACAGCTCAAAGGTCTTCTGGGTATCTCTCATTTCTCCACCAGCACAGATATTATCTCTGTCTTGCAGTCTGTTCTTCAATCTTTTCACCACTCATGGTACCCTCTGAATTTTGTTCTTGGCTGTTCATTCTTCATCTTCCTTCTACTGGCGAGATTCATTGGAAGAAGAAACAAAAAGCTGTTCTGGCTACCAGCAATTGCTCCATTATTATCAGTTATATTATCGACCCTAATCGTGTTTTTGACAAAAGCTGATAAACGCGGAGTTAAAATTGTGAAACATATTGATAGAGGTATAAATCGCAGCTCCGTTCATCAGCTACAACTTCACGGCCCTCACGTAGGGCAAGCTGCAAAAATTGGCCTGATTTCTGCCCTCATCGCTCTCACTGAAGCTATTGCAGTGGGAAGATCTTTCGCTTCCATCAATGGCTACCACCTTGATGGTAATAAGGAAATGGTGGCCATGGGGTTCATGAACATCGTAGGCTCTTTCACTTCTTGTTATGTTGCCACTGGTTCTTTTTCGAGGACTGCAGTGAATTTCAGCGCGGGATGTGAGACGGTGGTGTCGAACATCGTAATGGCTATAACGGTTATCGTGTCATTGGAATTGTTCACAAGATTCCTCTACTATACTCCCATGGCTATTCTTGCTTCCATCATCTTATCAGCTTTGCCGGGACTCATCGATCTTAATGAAGCTTATCACATATGGAAAGTTGACAAGCTTGATTTCTTAGCTTGCCTTGGAGCTTTTCTTGGGGTCTTGTTCGTTTCTGTTGAGATTGGTCTTCTCGCTGCGGTAGCAATTTCATTTGCCAAGATATTACTCAATTTTATTCGACCCAAGATTGAACTGGTCAGAAGACTACCAACAACTGATATCTTCTGTAACATCCGGCAATATCCTATGACTACAAAAACTCGAGGCATTATCATTATTCGAATTGACACTGGATTCCTTTGTTTTGCTAATGCTAATTTTATCAGAGATAAGGTTTTGAGATGGATTGCAGAAGAAGAAGAAGAAAACGACGAAGATGTAATTGCAGTTGACAATGGGAAAGAAAACATCAAAGAAGTAGTTATTGATATGACTAGCGTGATGAATGTGGATACTTCGGGACTTATGGCATTGGAGGAACTACATAGGAAGCTTATTTCCACTGGCGTAGAATTAAATATAGCAAACCCAAGATGGGAAGTGATTCACAAGCTGAAGATGGTTAAGTTCATAGACAGAATTGGAGGCAGAGTTTTTGAGTCTGTTGCTGAAGCTGTCCAAGCTTGTTCCTCATCCGAATTGTCTCCTTGA 2064 42.15 MGSLSTESSNVEKEGSHVHVGTEGRAGKLQWLLDSPEPPSAWHEFIGCLKEAFVPRSNRPSSSEKQKVSLRVFSVLRGVFPILSWGRNYKASKFRSDLMAGLTLASLSIPQVLTLSNSFSLSLTLSFSLYNYDVLQSIGYANLAKLDPQYGLYTSVVPPLIYSLLGSSRELAIGPVAVVSLLLSSMLEKIQDPFADPIAYRKLVFTVTFFAGSFQAAFGLFRLGFLVNFLSHAAIVGFMGGAAIVIGLQQLKGLLGISHFSTSTDIISVLQSVLQSFHHSWYPLNFVLGCSFFIFLLLARFIGRRNKKLFWLPAIAPLLSVILSTLIVFLTKADKRGVKIVKHIDRGINRSSVHQLQLHGPHVGQAAKIGLISALIALTEAIAVGRSFASINGYHLDGNKEMVAMGFMNIVGSFTSCYVATGSFSRTAVNFSAGCETVVSNIVMAITVIVSLELFTRFLYYTPMAILASIILSALPGLIDLNEAYHIWKVDKLDFLACLGAFLGVLFVSVEIGLLAAVAISFAKILLNFIRPKIELVRRLPTTDIFCNIRQYPMTTKTRGIIIIRIDTGFLCFANANFIRDKVLRWIAEEEEENDEDVIAVDNGKENIKEVVIDMTSVMNVDTSGLMALEELHRKLISTGVELNIANPRWEVIHKLKMVKFIDRIGGRVFESVAEAVQACSSSELSP 687
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 19029811 19033275 - Bpe009464.1 Bpe02g01617 99766
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe02g01617 687 ProSiteProfiles STAS domain profile. 569 680 IPR002645 -
Bpe02g01617 687 TIGRFAM sulP: sulfate permease 136 674 IPR001902 GO:0015301|GO:0016020|GO:0055085
Bpe02g01617 687 CDD STAS_SulP_like_sulfate_transporter 552 670 - -
Bpe02g01617 687 ProSitePatterns SLC26A transporters signature. 148 169 IPR018045 GO:0008271|GO:0008272
Bpe02g01617 687 SUPERFAMILY SpoIIaa-like 555 680 IPR036513 -
Bpe02g01617 687 Pfam STAS domain 552 676 IPR002645 -
Bpe02g01617 687 PANTHER SULFATE TRANSPORTER 126 685 IPR001902 GO:0015301|GO:0016020|GO:0055085
Bpe02g01617 687 PANTHER SULFATE TRANSPORTER 18 120 IPR001902 GO:0015301|GO:0016020|GO:0055085
Bpe02g01617 687 PANTHER LOW AFFINITY SULFATE TRANSPORTER 3-LIKE 126 685 - -
Bpe02g01617 687 Pfam Sulfate permease family 132 499 IPR011547 GO:0016021
Bpe02g01617 687 PANTHER LOW AFFINITY SULFATE TRANSPORTER 3-LIKE 18 120 - -
Bpe02g01617 687 Gene3D STAS domain 531 683 IPR036513 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g01617 Bpe-Chr2:19029811 Bpe10g00089 Bpe-Chr10:1347308 0 dispersed
Bpe02g01617 Bpe-Chr2:19029811 Bpe02g00092 Bpe-Chr2:692098 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe02g01617 K17469 - cit:102620800 918.687