Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe02g01635 ATGGTGAAGAAAGAGCTGAAAAACGTAGGTGGGTTATCGAGATCAATGGCGGACAAATCAGAAAAATCGCCATTGTCGCTACCCAAAAGCTGCAAGAAGAAATACAAGGGAGTGAGAATGAGAAGCTGGGGTTCATGGGTGTCTGAAATAAGAGCTCCAAATCAAAAAACAAGAATCTGGTTAGGTTCTTATTCCACTCCAGAAGCAGCAGCTAGGGCTTATGACGCTGCCCTTTTATGCCTCAGAGGATCTTCTGCAAATCCTAATCTCAATTTTCCCACCTCTTTTTCTTCGTCTTCTTCTTCTTGTCTCGATTCTGTCGTATCCCAGAAAAACTCCATCGTTATGTCTCCGAAGTCCATCCAAAGAGTTGCAGCTGCTGCAGCCAACACTTGGGTTGAAGAGAGAGAAAACTCCATTAGCACTCCAGCTTCGTCTTCTTCATCCCCATCAAATTCCAATCTCCACGACGAGCATGAATTTTCTACGATATCAACTTCCGAGTGGCACCGTATTTTTCATCTGGGCATTGAATCAACGACCGTGATGGAATCATGGGACTTCTTCGATGGCCCACAATCTCCGAAATATGTTGACCAATTGATCAGTGGTGCCTCGGTCGAACCGCATCTGGCTATGGTGGATGAATTTTACGAAGAAAGTGATATTCGTTTATGGAGTTTCTGTTGA 690 44.35 MVKKELKNVGGLSRSMADKSEKSPLSLPKSCKKKYKGVRMRSWGSWVSEIRAPNQKTRIWLGSYSTPEAAARAYDAALLCLRGSSANPNLNFPTSFSSSSSSCLDSVVSQKNSIVMSPKSIQRVAAAAANTWVEERENSISTPASSSSSPSNSNLHDEHEFSTISTSEWHRIFHLGIESTTVMESWDFFDGPQSPKYVDQLISGASVEPHLAMVDEFYEESDIRLWSFC 229
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 19168092 19168781 - Bpe009481.1 Bpe02g01635 99784
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe02g01635 229 PRINTS Ethylene responsive element binding protein signature 57 73 IPR001471 GO:0003700|GO:0006355
Bpe02g01635 229 PRINTS Ethylene responsive element binding protein signature 35 46 IPR001471 GO:0003700|GO:0006355
Bpe02g01635 229 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF014 19 229 - -
Bpe02g01635 229 CDD AP2 33 93 IPR001471 GO:0003700|GO:0006355
Bpe02g01635 229 ProSiteProfiles AP2/ERF domain profile. 34 93 IPR001471 GO:0003700|GO:0006355
Bpe02g01635 229 Gene3D AP2/ERF domain 33 95 IPR036955 GO:0003700|GO:0006355
Bpe02g01635 229 Pfam AP2 domain 34 83 IPR001471 GO:0003700|GO:0006355
Bpe02g01635 229 SUPERFAMILY DNA-binding domain 34 94 IPR016177 GO:0003677
Bpe02g01635 229 MobiDBLite consensus disorder prediction 137 159 - -
Bpe02g01635 229 MobiDBLite consensus disorder prediction 1 29 - -
Bpe02g01635 229 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 19 229 - -
Bpe02g01635 229 SMART rav1_2 34 99 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g01635 Bpe-Chr2:19168092 Bpe04g00104 Bpe-Chr4:729306 4.88E-26 dispersed
Bpe14g00377 Bpe-Chr14:3572317 Bpe02g01635 Bpe-Chr2:19168092 6.50E-83 wgd
Bpe02g00074 Bpe-Chr2:570648 Bpe02g01635 Bpe-Chr2:19168092 8.93E-34 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
20991 PF00847 AP2 1.10E-12 CL0081 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe02g01635 - - jre:108988309 192.586