Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe02g01650 ATGTCGACCCAGAATCGCCGTTCGTCGTTTTCGTCCTCTACGTCGTCTTCATTGGCGAAGAGGCAAGCGTCGTCGGAGAATATGGGGAAGGCTGCTGCGGTTCCGACTCATTTCGCAAAGAAGCGGGCGCCTCTCGGAAACATCACCAATTTGAAGGGTGCTCCGCAAAGTGCGTCGAGAAGCTCTCTCCCTTCTTCTACTATGGCGCCGCATACAACAAAAATTTCCAAGGGTAAGAAATGTTCCCCTGCAGGAAATGGCAGCCCAACCTTACAAGGAAGTCAGCTGCCTGCAATGGTTAATGTTAAATCTACTTCAACATTTCCTCTCGAACCTACAAATTTCCCAAAATGTGAAGTGATCGTCCCTTCCTTAGCAGTGATCCCACCTCCTAGCAGCATGGATGTTTCTCCAAGTAAATTAGATGGAAGTTCAGTTTCTTTGGATGAGACAATGTCTACATCTGATTCCTTTAAGAGTCCTGAAGTGGAGTACTTAGACAACAATGATGTACCCACTGTCAATCCCATCGAGAGGAAAGCATTAAGCAATCTCTACATTTCCGACCATCACGTAGACAATACTGATGGGAATCTTTGCAATAGAGATATGCTTATTGACATTCAGAGAGACGAGAAATTTGTGGATATTGATAATAACTACGAAGATCCACAGATGTGTGCTACCATTGCTAGTGATATTTACAAGCATTTGCGCCAATCGGAGGCAAAGAAAAGGCCTTCCACTGATTTCATGGAGAGGATTCAGATGGACATAAGTGCTAACATGCGTGCCATTTTAATCGATTGGCTTGTGGAGGTAGCAGAAGAATACAGATTAATCCCCGATACGCTCTATTTGACTGTAAATTACATTGATCGATATCTCTCTGGTAATAAAATGGACAGAAAAAGACTACAGCTGCTTGGGGTTGCCTCCATGATGATTGCTTCGAAGTATGAGGAGATCTGTGCGCCACAGGTGGAAGAATTTTGTTATATTACAGACAATACATATTTTAAGGAAGAGGTATTGCAAATGGAATCATCTATTTTGAACTACTTGAAGTTTGAAATGACTGCACCAACAGTTCCATCAATGCAAATAGAATGCTTAGCCAACTACCTTGCCGAGCTGTCGCTTATCGAATACAACATGCTTGTTTATTCTCCGTCACTCATTGCCGCTTCAGCCATTTTCTTGGCGAAGTTCATCCTTTGCCCAACTAAGAGACCATGGAACTCCACATTGCAGCATTACACACTTTACCAGCCTCGTGATCTGAGAGACTGCGTAAAGAACTTGCATAGACTGTGCTGTAGCACTCCAACTTCTAGCCTACCAGCCATTAGAGAGAAATACAGCCAACACAAGTACAAACAGGTGGCTAAAAAACACAGTCCTCCAGTCTTACCTTCTGAGTTTTTCTACAATGAAATCCAA 1443 43.31 MSTQNRRSSFSSSTSSSLAKRQASSENMGKAAAVPTHFAKKRAPLGNITNLKGAPQSASRSSLPSSTMAPHTTKISKGKKCSPAGNGSPTLQGSQLPAMVNVKSTSTFPLEPTNFPKCEVIVPSLAVIPPPSSMDVSPSKLDGSSVSLDETMSTSDSFKSPEVEYLDNNDVPTVNPIERKALSNLYISDHHVDNTDGNLCNRDMLIDIQRDEKFVDIDNNYEDPQMCATIASDIYKHLRQSEAKKRPSTDFMERIQMDISANMRAILIDWLVEVAEEYRLIPDTLYLTVNYIDRYLSGNKMDRKRLQLLGVASMMIASKYEEICAPQVEEFCYITDNTYFKEEVLQMESSILNYLKFEMTAPTVPSMQIECLANYLAELSLIEYNMLVYSPSLIAASAIFLAKFILCPTKRPWNSTLQHYTLYQPRDLRDCVKNLHRLCCSTPTSSLPAIREKYSQHKYKQVAKKHSPPVLPSEFFYNEIQ 481
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 19236533 19239611 + Bpe025163 Bpe02g01650 99799
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe02g01650 481 MobiDBLite consensus disorder prediction 137 156 - -
Bpe02g01650 481 SMART Cyclin_C_2 349 468 IPR004367 -
Bpe02g01650 481 PIRSF Cyclin_A_B_D_E 1 476 IPR039361 -
Bpe02g01650 481 ProSitePatterns Cyclins signature. 264 295 IPR006671 -
Bpe02g01650 481 MobiDBLite consensus disorder prediction 50 73 - -
Bpe02g01650 481 CDD CYCLIN 263 352 IPR013763 -
Bpe02g01650 481 PANTHER CYCLINS 30 478 IPR039361 -
Bpe02g01650 481 MobiDBLite consensus disorder prediction 132 156 - -
Bpe02g01650 481 PANTHER CYCLIN-A1-1 30 478 - -
Bpe02g01650 481 MobiDBLite consensus disorder prediction 1 24 - -
Bpe02g01650 481 SMART cyclin_7 269 353 IPR013763 -
Bpe02g01650 481 SMART cyclin_7 357 437 IPR013763 -
Bpe02g01650 481 Gene3D - 233 464 - -
Bpe02g01650 481 SUPERFAMILY Cyclin-like 365 469 IPR036915 -
Bpe02g01650 481 Pfam Cyclin, N-terminal domain 233 359 IPR006671 -
Bpe02g01650 481 Gene3D - 247 360 - -
Bpe02g01650 481 MobiDBLite consensus disorder prediction 1 96 - -
Bpe02g01650 481 SUPERFAMILY Cyclin-like 222 359 IPR036915 -
Bpe02g01650 481 CDD CYCLIN 366 436 IPR013763 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe02g00023 Bpe02g01650 CCT
Bpe02g01650 Bpe14g00391 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g01650 Bpe-Chr2:19236533 Bpe14g00392 Bpe-Chr14:3677387 0 dispersed
Bpe14g00391 Bpe-Chr14:3671314 Bpe02g01650 Bpe-Chr2:19236533 3.45E-129 wgd
Bpe02g01650 Bpe-Chr2:19236533 Bpe04g00165 Bpe-Chr4:1081293 7.12E-07 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe02g01650 K06627 - qsu:112028095 645.966