Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe02g01693 ATGGATGTTGGTGAGTTCAACAAAGAAACAAGAGTACCAGGTGGGTCTTCATCTTCCACATTTTCCCACCTCATCGGAGAATCTTCCGCCGGAGTTGACAGAAGACGATCATCTGAAGCTATACACAATGGCGTTAATTTTCCTCATCTTCTTCGTCAAGAATCGCTTGGCCAACAAAGAGATGTTGTTCCCGATCGAGTGGCTTCACCGGAAGAGAATTTCGGTTCGTTTACCGGTAGATCTAAACCGAGGAACTCACCGGCGGGAATTACTAGATACCGGGAATGTCTAAAAAACCATGCCGCGAATATTGGTGGGAACATTTACGACGGCTGCGGAGAGTTCATGCCGAACGGCGAAGACGGAACCCTAGAAGCCTTGAAATGCGCCGCCTGCGACTGCCACCGTAATTTCCACCGAAAAGAAGTGGATGGCGAAACTCAATTGATCAGTCCGACCTCGAGAAGAACCATTGTCCTCAATCATCTCCAGCTTCCACCGCCATTGCCGTCTCCCCACCACCATAAATTCTCTATGGGCCTGAATTTCCACTCAAGCCCTACCGCTCCGATCGTGGCGCCCATGAACGTTGCATTCGGCGGAAACGAATCCTCCAGCGAAGATTTAAACGTCTTCCATTCCAACGCCGAAGGGGTTCCACACCCACCATTTTCACTATCGAAGAAGAGGTTCAGAACCAAGTTCACTCAGGAACAGAAGAACAGAATGCTGGAATTCGCAGAGAAAGTGGGGTGGAGAATGCAAAAGCAAAACGAAGAAGAAGTAGACAAGTTCTGCGCAGAAGTAGGAGTAAAGAGACAAGTTCTAAAGGTATGGATGCACAATAACAAAACGACCACCGTGAAAAAGCAAAGCGAGAATCATGATCAGCCGTTGGAGATCACAGGAGCAGCCGACGAAAGAGATTAG 930 48.49 MDVGEFNKETRVPGGSSSSTFSHLIGESSAGVDRRRSSEAIHNGVNFPHLLRQESLGQQRDVVPDRVASPEENFGSFTGRSKPRNSPAGITRYRECLKNHAANIGGNIYDGCGEFMPNGEDGTLEALKCAACDCHRNFHRKEVDGETQLISPTSRRTIVLNHLQLPPPLPSPHHHKFSMGLNFHSSPTAPIVAPMNVAFGGNESSSEDLNVFHSNAEGVPHPPFSLSKKRFRTKFTQEQKNRMLEFAEKVGWRMQKQNEEEVDKFCAEVGVKRQVLKVWMHNNKTTTVKKQSENHDQPLEITGAADERD 309
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 19485985 19486914 + Bpe009527.1 Bpe02g01693 99842
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe02g01693 309 Pfam ZF-HD protein dimerisation region 91 143 IPR006456 -
Bpe02g01693 309 MobiDBLite consensus disorder prediction 1 37 - -
Bpe02g01693 309 Gene3D - 220 289 - -
Bpe02g01693 309 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 93 142 IPR006456 -
Bpe02g01693 309 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 92 143 IPR006456 -
Bpe02g01693 309 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 5 59 291 - -
Bpe02g01693 309 TIGRFAM homeo_ZF_HD: homeobox domain, ZF-HD class 228 284 IPR006455 -
Bpe02g01693 309 MobiDBLite consensus disorder prediction 51 87 - -
Bpe02g01693 309 SUPERFAMILY Homeodomain-like 224 287 IPR009057 -
Bpe02g01693 309 MobiDBLite consensus disorder prediction 11 26 - -
Bpe02g01693 309 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 59 291 - -
Bpe02g01693 309 MobiDBLite consensus disorder prediction 288 309 - -
Bpe02g01693 309 MobiDBLite consensus disorder prediction 285 309 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g01693 Bpe-Chr2:19485985 Bpe13g00443 Bpe-Chr13:11967088 9.10E-64 dispersed
Bpe12g00548 Bpe-Chr12:11315665 Bpe02g01693 Bpe-Chr2:19485985 3.04E-20 dispersed
Bpe14g00312 Bpe-Chr14:3106882 Bpe02g01693 Bpe-Chr2:19485985 3.87E-34 dispersed
Bpe07g00043 Bpe-Chr7:377369 Bpe02g01693 Bpe-Chr2:19485985 1.27E-41 transposed
Bpe02g01693 Bpe-Chr2:19485985 Bpe05g00095 Bpe-Chr5:1688161 4.10E-99 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
20995 PF04770 ZF-HD_dimer 1.80E-29 No_clan Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe02g01693 - - csv:101216040 369.777