Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe02g01693 | ATGGATGTTGGTGAGTTCAACAAAGAAACAAGAGTACCAGGTGGGTCTTCATCTTCCACATTTTCCCACCTCATCGGAGAATCTTCCGCCGGAGTTGACAGAAGACGATCATCTGAAGCTATACACAATGGCGTTAATTTTCCTCATCTTCTTCGTCAAGAATCGCTTGGCCAACAAAGAGATGTTGTTCCCGATCGAGTGGCTTCACCGGAAGAGAATTTCGGTTCGTTTACCGGTAGATCTAAACCGAGGAACTCACCGGCGGGAATTACTAGATACCGGGAATGTCTAAAAAACCATGCCGCGAATATTGGTGGGAACATTTACGACGGCTGCGGAGAGTTCATGCCGAACGGCGAAGACGGAACCCTAGAAGCCTTGAAATGCGCCGCCTGCGACTGCCACCGTAATTTCCACCGAAAAGAAGTGGATGGCGAAACTCAATTGATCAGTCCGACCTCGAGAAGAACCATTGTCCTCAATCATCTCCAGCTTCCACCGCCATTGCCGTCTCCCCACCACCATAAATTCTCTATGGGCCTGAATTTCCACTCAAGCCCTACCGCTCCGATCGTGGCGCCCATGAACGTTGCATTCGGCGGAAACGAATCCTCCAGCGAAGATTTAAACGTCTTCCATTCCAACGCCGAAGGGGTTCCACACCCACCATTTTCACTATCGAAGAAGAGGTTCAGAACCAAGTTCACTCAGGAACAGAAGAACAGAATGCTGGAATTCGCAGAGAAAGTGGGGTGGAGAATGCAAAAGCAAAACGAAGAAGAAGTAGACAAGTTCTGCGCAGAAGTAGGAGTAAAGAGACAAGTTCTAAAGGTATGGATGCACAATAACAAAACGACCACCGTGAAAAAGCAAAGCGAGAATCATGATCAGCCGTTGGAGATCACAGGAGCAGCCGACGAAAGAGATTAG | 930 | 48.49 | MDVGEFNKETRVPGGSSSSTFSHLIGESSAGVDRRRSSEAIHNGVNFPHLLRQESLGQQRDVVPDRVASPEENFGSFTGRSKPRNSPAGITRYRECLKNHAANIGGNIYDGCGEFMPNGEDGTLEALKCAACDCHRNFHRKEVDGETQLISPTSRRTIVLNHLQLPPPLPSPHHHKFSMGLNFHSSPTAPIVAPMNVAFGGNESSSEDLNVFHSNAEGVPHPPFSLSKKRFRTKFTQEQKNRMLEFAEKVGWRMQKQNEEEVDKFCAEVGVKRQVLKVWMHNNKTTTVKKQSENHDQPLEITGAADERD | 309 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 19485985 | 19486914 | + | Bpe009527.1 | Bpe02g01693 | 99842 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe02g01693 | 309 | Pfam | ZF-HD protein dimerisation region | 91 | 143 | IPR006456 | - | |
Bpe02g01693 | 309 | MobiDBLite | consensus disorder prediction | 1 | 37 | - | - | |
Bpe02g01693 | 309 | Gene3D | - | 220 | 289 | - | - | |
Bpe02g01693 | 309 | ProSiteProfiles | Zinc-finger ZF-HD dimerization-type profile. | 93 | 142 | IPR006456 | - | |
Bpe02g01693 | 309 | TIGRFAM | ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain | 92 | 143 | IPR006456 | - | |
Bpe02g01693 | 309 | PANTHER | ZINC-FINGER HOMEODOMAIN PROTEIN 5 | 59 | 291 | - | - | |
Bpe02g01693 | 309 | TIGRFAM | homeo_ZF_HD: homeobox domain, ZF-HD class | 228 | 284 | IPR006455 | - | |
Bpe02g01693 | 309 | MobiDBLite | consensus disorder prediction | 51 | 87 | - | - | |
Bpe02g01693 | 309 | SUPERFAMILY | Homeodomain-like | 224 | 287 | IPR009057 | - | |
Bpe02g01693 | 309 | MobiDBLite | consensus disorder prediction | 11 | 26 | - | - | |
Bpe02g01693 | 309 | PANTHER | ZINC-FINGER HOMEODOMAIN PROTEIN 2 | 59 | 291 | - | - | |
Bpe02g01693 | 309 | MobiDBLite | consensus disorder prediction | 288 | 309 | - | - | |
Bpe02g01693 | 309 | MobiDBLite | consensus disorder prediction | 285 | 309 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe02g01693 | Bpe-Chr2:19485985 | Bpe13g00443 | Bpe-Chr13:11967088 | 9.10E-64 | dispersed | |
Bpe12g00548 | Bpe-Chr12:11315665 | Bpe02g01693 | Bpe-Chr2:19485985 | 3.04E-20 | dispersed | |
Bpe14g00312 | Bpe-Chr14:3106882 | Bpe02g01693 | Bpe-Chr2:19485985 | 3.87E-34 | dispersed | |
Bpe07g00043 | Bpe-Chr7:377369 | Bpe02g01693 | Bpe-Chr2:19485985 | 1.27E-41 | transposed | |
Bpe02g01693 | Bpe-Chr2:19485985 | Bpe05g00095 | Bpe-Chr5:1688161 | 4.10E-99 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
20995 | PF04770 | ZF-HD_dimer | 1.80E-29 | No_clan | Bpe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe02g01693 | - | - | csv:101216040 | 369.777 |