Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe02g01697 ATGGTCTCCGACGCTCAGATCGTCTGCGTCACTGGCGCCTCCGGCTTCGTCGGTTCCTGGCTCGTTATGCGCCTCCTCGAGCGGGGTTACACCGTCCGAGCAACTGTCCGCGATCCTGGGAATGTCAAGAAGGTGAAGCATTTGCTTGAATTACCTGATGCAGAGACTCGCTTGACGCTTTGGAAAGCCGATCTTTCTGTTGAAGGGAGCTTCGAGGAGCCGATTAGAGGCTGCACGGGAGTTTTCCATGTTGCTACTCCCATGGATTTCGAGTCTAAAGACCCCGAGAACGAAGTGATTAAGCCGACGATTGGCGGAATGTTGAGCATAATGAAAGCGTGTAAAGACGCTAAAACTGTGCGGAGATTGGTGTTTACTTCATCCGCCGGAACTGTCAATGTTCAAGAACATCTGAAACAACTCTACGATGAAACCTGCTGGAGCGACGTCGAATTCTGCAGATCCAAGAAGATGACGGGATGGATGTATTTCGTGTCCAAGACATTGGCAGAGCAGGCGGCATGGGAGTACGCTAAGGAACACAGCATAGACTTCATTAGCATCATCCCCACCCTCGTCATCGGCTCATTTCTGATGCCATCAATGCCACCGAGCCTGATCACTGGACTTTCCCCCATGACCAGAACTGAGAGCCATTACTCGATCATAAAGCAATGTCAGTATGTTCATCTGGATGATCTTTGCGACGCTCATATATTCCTGTACGAGAATCCTAAAGCTGAGGGGAGATACATTTGCTCATCTCACAACGCCACTATTTACGATGTCGCCAAACTGCTCAAAGAGAAATACCCAGAATACGACGTCCCAACCAAGTTCAAAGGGATTGAAGAAAATTTGAAGCCGATCGAGTTCTCGTCAAAGAAGCTGACAGACATGGGGTTCGAGTTCAAGTACAGCTTGGAGGACATGTTCGGAGGAGCCGTGGAAACGTGCGAGGCCAAAGGATTGATCTATCCTGCGACCGGAATCCATGGCCATGGCAACGGAAAAGCCTGA 1020 50.0 MVSDAQIVCVTGASGFVGSWLVMRLLERGYTVRATVRDPGNVKKVKHLLELPDAETRLTLWKADLSVEGSFEEPIRGCTGVFHVATPMDFESKDPENEVIKPTIGGMLSIMKACKDAKTVRRLVFTSSAGTVNVQEHLKQLYDETCWSDVEFCRSKKMTGWMYFVSKTLAEQAAWEYAKEHSIDFISIIPTLVIGSFLMPSMPPSLITGLSPMTRTESHYSIIKQCQYVHLDDLCDAHIFLYENPKAEGRYICSSHNATIYDVAKLLKEKYPEYDVPTKFKGIEENLKPIEFSSKKLTDMGFEFKYSLEDMFGGAVETCEAKGLIYPATGIHGHGNGKA 339
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 19503593 19505079 - Bpe009531.1 Bpe02g01697 99846

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe02g01697 339 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 6 317 IPR036291 -
Bpe02g01697 339 Gene3D - 2 335 - -
Bpe02g01697 339 CDD FR_SDR_e 8 302 - -
Bpe02g01697 339 Pfam NAD dependent epimerase/dehydratase family 8 248 IPR001509 -
Bpe02g01697 339 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 3 329 - -
Bpe02g01697 339 PANTHER DIHYDROFLAVONOL 4-REDUCTASE 3 329 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe02g01697 K13082 DFR; bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase [EC:1.1.1.219 1.1.1.234] - zju:107420293 558.525
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g01697 Bpe-Chr2:19503593 Bpe08g00337 Bpe-Chr8:1993110 3.86E-99 dispersed
Bpe11g00712 Bpe-Chr11:5492428 Bpe02g01697 Bpe-Chr2:19503593 1.43E-66 dispersed
Bpe02g01697 Bpe-Chr2:19503593 Bpe05g00102 Bpe-Chr5:1910808 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g973 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Cone17ag1352 . . . . . Blo17g00784 . . Bda01g01499 Bpe02g01697 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0001471 4 1 2 1 2 2 1 2 2 1 1 2 2 1 2 2 2 4 2 2 2 4 3 2 2 1 6 4 4 6 72
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bpe02g01697 Bpe_Chr02 FPKM 0.680764 1.223656 1.434778 1.702235 0.814721 0.613747 1.028468 1.205279 0.62496 1.90049