Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe02g01704 ATGGCCACTCCAGTTGAACCTCCTAATGGGATTGGATCCCCAGGGAAGCATTACTATTCAATGTGGCAAACTTTGTTCGAGATTGATACGAAATACATACCCATCAAGCCTATTGGTCGCGGGGCATATGGCATTGTATGCTCTTCTGTGAATAGGGAAAATAACGAGAAAGTCGCCATAAAAAGGATTAACAATGCTTTTGAGAATCGTATTGATGCCCTTAGAACTTTGCGTGAACTGAAGCTACTTAGGCACCTTCGGCATGAAAATGTGATTGCCTTGAAAGATGTTATGATGCCTATTCATCGAACAAGCTTTAAGGATGTCTATTTGGTTTATGAACTTATGGATACAGATCTTCATCAAATAATTAAGTCTCCTCAAGCCCTCTCCAATGATCATTGCCAGTATTTCCTGTTTCAGTTGCTACGAGGTTTGAAATATTTGCATTCAGCTAACATTCTTCATCGTGACCTGAAGCCTGGAAACCTTCTTGTTAATGCAAACTGTGACCTTAAAATATGTGATTTTGGGTTAGCACGTACAAGCAAGGGCAAGAATCAATTTATGACTGAGTATGTTGTGACTCGCTGGTATCGAGCTCCAGAGCTTCTCCTTTGCTGTGACTATTATGGAACATCAATTGACGTATGGTCTGTGGGATGCATTTTTGCCGAGCTTCTTGGTAGAAAACCTATCTTCCCTGGTACTGAGTGTCTGAATCAGCTCAAACTTATTATAAACATCCTAGGCAGCCAGAGGGAGGAGGATCTGGAGTTTATAGACAATCCAAAAGCAAGAAAATACATCAAATCCCTTCCTTGCTCACTCGGAACCCCATTATCCTGTCTTTATCCCAATGCCAATCCCCTGGCCGTTGATCTGCTGCAAAAAATGCTTATTTTTGACCCCTCAAAGCGGATAAGTGTGACTGATGCCCTCCAACACCCATACATGTCAGCCCTTTATGATCCAAATTCCAATCCTCCTGCTCAAGTACCACTTGATCTTGACATAGATGAGGAATTGGGAGAAGAAATGATAAGAGAGATGATGTGGTTGGAAATGCTACATTACCATCCTGAAGCTGTTGTGGCCATAGGAGAGGTGTGTTCCTAA 1119 42.0 MATPVEPPNGIGSPGKHYYSMWQTLFEIDTKYIPIKPIGRGAYGIVCSSVNRENNEKVAIKRINNAFENRIDALRTLRELKLLRHLRHENVIALKDVMMPIHRTSFKDVYLVYELMDTDLHQIIKSPQALSNDHCQYFLFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSKGKNQFMTEYVVTRWYRAPELLLCCDYYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSQREEDLEFIDNPKARKYIKSLPCSLGTPLSCLYPNANPLAVDLLQKMLIFDPSKRISVTDALQHPYMSALYDPNSNPPAQVPLDLDIDEELGEEMIREMMWLEMLHYHPEAVVAIGEVCS 372
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 19548284 19550382 + Bpe009538.1 Bpe02g01704 99853
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe02g01704 372 SUPERFAMILY Protein kinase-like (PK-like) 24 326 IPR011009 -
Bpe02g01704 372 CDD STKc_TEY_MAPK 26 361 - -
Bpe02g01704 372 SMART serkin_6 32 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe02g01704 372 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 11 364 - -
Bpe02g01704 372 Gene3D Phosphorylase Kinase; domain 1 19 353 - -
Bpe02g01704 372 ProSitePatterns Serine/Threonine protein kinases active-site signature. 154 166 IPR008271 GO:0004672|GO:0006468
Bpe02g01704 372 Pfam Protein kinase domain 35 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe02g01704 372 Gene3D Transferase(Phosphotransferase) domain 1 116 345 - -
Bpe02g01704 372 ProSiteProfiles Protein kinase domain profile. 32 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe02g01704 372 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 11 364 - -
Bpe02g01704 372 ProSitePatterns MAP kinase signature. 67 170 IPR003527 GO:0004707|GO:0005524|GO:0006468
Bpe02g01704 372 ProSitePatterns Protein kinases ATP-binding region signature. 38 61 IPR017441 GO:0005524
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g01704 Bpe-Chr2:19548284 Bpe13g00433 Bpe-Chr13:11913713 0 dispersed
Bpe02g01704 Bpe-Chr2:19548284 Bpe11g01839 Bpe-Chr11:14808273 4.06E-149 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63197 PF00069 Pkinase 1.20E-70 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe02g01704 K20535 - cit:102623819 680.248