Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe02g01715 ATGGCTGGATTTTTCTATCTAGGTGGGAGAGATCAAGATCTACCAAACAAAGAAAAGGAAGACGGAGAAGAAGAAGAAGATCAGAGAGCACAAAACCTATACTTGTACAGACAGGAAGAGATCTACAACAAGGGTTTCGAGATATGGCCTCAGTACAATCAGCAAAACACGAGCAACTACCTGTCTTTCGGTGTGGGTCCCAGCCAAAGAAACTTCATGAACGTCTCTGATCATGATTTATCAAGATCAGGCGGAAGCGGCGGCGGCGGAGGAGGAGGAGGGATGAATTGCCAAGACTGTGGAAATCAAGCTAAGAAAGACTGCTCTTATTTGAGGTGCAGAACTTGCTGTAAAAGCAGAGGTTTTCAATGTCAAACCCACGTGAAAAGCACTTGGGTTCCGGCTGCCAAACGGCGGGAGAGGCAGCAGCAGCTGGCGGCTTTGCATCATCAGCAGTCGGAAGGGCCGTCGCAACCTAGGCCGGGAGAGAATACGAAAAAACTCAAGGAGTTGAATGTGGCCGCTTCTTCTTCTCTTGCCTGCGCTCGGTTAGAGCCGACGGAGTTTCCAGCTGATGTGAATTCCCCAGCTGTCTTTCGCTGCGTGAAAGTCCGTGCAATGGTCGATGAAGATGAACAGTTTGCATATCAGACGGCGGTAACCATCGGCGGCCATGTCTTCAAAGGAATTCTCTACGATCAAGGGCACGAAAGTCGTTACACCGGCGGAGGCGGTGAAAACTCCACCGGCCACGGCGGTGATGAAGCCCGGCAACTTAACCTTATCACTGGACCCTCTGATACCATACCCACTGCAACTACTAGTAATCTTTCTGCTACATTGCTCGACTCTTCTCTATATCCAGCTCCTCTTACTTCATTTATAGCTGGCACGCAGTTCTTCCCATCTTCCCGGCCATGA 921 49.95 MAGFFYLGGRDQDLPNKEKEDGEEEEDQRAQNLYLYRQEEIYNKGFEIWPQYNQQNTSNYLSFGVGPSQRNFMNVSDHDLSRSGGSGGGGGGGGMNCQDCGNQAKKDCSYLRCRTCCKSRGFQCQTHVKSTWVPAAKRRERQQQLAALHHQQSEGPSQPRPGENTKKLKELNVAASSSLACARLEPTEFPADVNSPAVFRCVKVRAMVDEDEQFAYQTAVTIGGHVFKGILYDQGHESRYTGGGGENSTGHGGDEARQLNLITGPSDTIPTATTSNLSATLLDSSLYPAPLTSFIAGTQFFPSSRP 306
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 19629997 19631394 - Bpe009546.1 Bpe02g01715 99864
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe02g01715 306 MobiDBLite consensus disorder prediction 139 164 - -
Bpe02g01715 306 MobiDBLite consensus disorder prediction 12 29 - -
Bpe02g01715 306 MobiDBLite consensus disorder prediction 238 257 - -
Bpe02g01715 306 TIGRFAM LRP1_Cterm: LRP1 C-terminal domain 189 235 IPR006511 -
Bpe02g01715 306 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 1 303 IPR007818 GO:0003700|GO:0006355
Bpe02g01715 306 MobiDBLite consensus disorder prediction 146 160 - -
Bpe02g01715 306 Pfam Domain of unknown function (DUF702) 94 237 - -
Bpe02g01715 306 PANTHER PROTEIN SHI RELATED SEQUENCE 7 1 303 - -
Bpe02g01715 306 TIGRFAM put_zinc_LRP1: putative zinc finger domain, LRP1 type 96 138 IPR006510 -
Bpe02g01715 306 MobiDBLite consensus disorder prediction 1 29 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe02g01715 Bpe04g00228 CCT
Bpe02g00368 Bpe02g01715 CCT
Bpe02g01715 Bpe02g00368 ECH
Bpe02g01715 Bpe04g00228 ECH
Bpe02g00368 Bpe02g01715 ECH
Bpe02g01715 Bpe05g00123 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g01715 Bpe-Chr2:19629997 Bpe11g00939 Bpe-Chr11:6952178 1.47E-50 dispersed
Bpe10g00138 Bpe-Chr10:2605842 Bpe02g01715 Bpe-Chr2:19629997 2.58E-81 wgd
Bpe02g00368 Bpe-Chr2:2420906 Bpe02g01715 Bpe-Chr2:19629997 2.50E-114 wgd
Bpe02g01715 Bpe-Chr2:19629997 Bpe04g00228 Bpe-Chr4:1542559 1.71E-114 wgd
Bpe02g01715 Bpe-Chr2:19629997 Bpe05g00123 Bpe-Chr5:2598777 1.59E-172 wgd
Bpe02g01715 Bpe-Chr2:19629997 Bpe06g00032 Bpe-Chr6:385485 8.78E-74 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
20998 PF05142 DUF702 1.20E-62 No_clan Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe02g01715 - - cmo:103488016 354.369