Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe02g01717 ATGAAGATCCAGTGCGACGTCTGTAACAGAGACGAAGCCTCTCTTTTCTGCGTCGCCGACGAAGCCGCCATTTGCGCCGCTTGCGACCACCTTGTCCACCACGCAAACAAGCTCGCTTCGAAACACCGCCGATTTTCTCTTCTCCGCCCTTCTGCAAACCAATTCACTCCTTGTGATGTCTGCCAAGAGAGACAAGCTTTTTTGTTTTGTCAGCAGGACAGAGCGATGCTTTGCAGAGACTGCGACTTTCAGATTCATAGCGCTAACGAGCACACAAAAAAGCATGATAGGTTCCTTCTTACTGGGATCAAGCTTTCTCCGACGTCTGATTTATATGCACAATCTAAAACAGCTTTAACCAAGGGTGATGGTAGCGTCGTTGTTCCCGATCTAAAATTAAACCCCATGGTCAAGAAATCCGCTTCTGCTTCATCTGCAGTGTCGAACCCGGAATCTTTGAGTGGAAGTTCATCAACTTTACCTCTTGTTCTGCCTATAAATAAGGGCTGTGAGGAAGATTGGAAAGCTAATGGAGGGGATGACTTGGCTAGTAGCATATCAGAGTATTTGATAGAGACACTTCCTGGTTGGCACGTTGAAGATCTTCTGGATTCATCTCCTTCTTTTGGTTTCTGTAAGACTGATGATGATTCCACTCTTCCAATCATGGACGATGAACTTGAAAACAGTCTAAGTGTCTTTTGGGTGCCTCAGGCAGCATACTCTCTGCAACCTGCTGAAATGACGAGTGGGGAAAATGTCTTCAACGAATCAGAAGAATCAAACATAAAAGCAAACAGAGGAGGGTGGATAGACGATGGCTTCACAGTCCCACAAATCTGCCCTTCATCTTCTGGTCTCAAGAGATCCAGGCCATTTTGGTAG 885 46.1 MKIQCDVCNRDEASLFCVADEAAICAACDHLVHHANKLASKHRRFSLLRPSANQFTPCDVCQERQAFLFCQQDRAMLCRDCDFQIHSANEHTKKHDRFLLTGIKLSPTSDLYAQSKTALTKGDGSVVVPDLKLNPMVKKSASASSAVSNPESLSGSSSTLPLVLPINKGCEEDWKANGGDDLASSISEYLIETLPGWHVEDLLDSSPSFGFCKTDDDSTLPIMDDELENSLSVFWVPQAAYSLQPAEMTSGENVFNESEESNIKANRGGWIDDGFTVPQICPSSSGLKRSRPFW 294
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
2 19653960 19655090 + Bpe009548.1 Bpe02g01717 99866
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Bpe02g01717 294 ProSiteProfiles Zinc finger B-box type profile. 53 100 IPR000315 GO:0008270
Bpe02g01717 294 CDD Bbox1_BBX-like 57 100 - -
Bpe02g01717 294 Pfam B-box zinc finger 4 44 IPR000315 GO:0008270
Bpe02g01717 294 Pfam B-box zinc finger 55 93 IPR000315 GO:0008270
Bpe02g01717 294 PANTHER B-BOX ZINC FINGER PROTEIN 19 1 292 - -
Bpe02g01717 294 Gene3D Classic Zinc Finger 1 97 - -
Bpe02g01717 294 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Bpe02g01717 294 CDD Bbox1_BBX-like 5 47 - -
Bpe02g01717 294 PANTHER B-BOX ZINC FINGER PROTEIN 22 1 292 - -
Bpe02g01717 294 SMART bboxneu5 4 47 IPR000315 GO:0008270
Bpe02g01717 294 SMART bboxneu5 53 100 IPR000315 GO:0008270
       

Event-related genes


       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g01717 Bpe-Chr2:19653960 Bpe05g00323 Bpe-Chr5:16885232 1.02E-58 dispersed
Bpe15g00849 Bpe-Chr15:18497243 Bpe02g01717 Bpe-Chr2:19653960 2.43E-63 wgd
Bpe02g00365 Bpe-Chr2:2405816 Bpe02g01717 Bpe-Chr2:19653960 8.09E-61 wgd
Bpe02g01717 Bpe-Chr2:19653960 Bpe05g00126 Bpe-Chr5:2779190 3.57E-140 wgd
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
20999 PF00643 zf-B_box 2.10E-06 No_clan Bpe TF
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe02g01717 - - tcc:18591484 311.612