Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe02g01741 GTACGTAAATTAACTTCTTTTTTTTTTGTTTTGTTTTATCCAGGCAGATCTCAGAGGGAGACCGTCAATGGCTTGCCAATCAAGTTAAGCGTAAACGAAGAATATCTGGGAGCATTCAGAACAAAATCATACATAGAAATGTCTGACAGAGTTCATAAGAAGCTAGAAACTACAGCAAGCACGAGTAAATCCTCTAGCACATCAACACATCTGTCTGAGTATCTGATTGAACCTCGTCAAGAAACCCTAAAATCCATTCTCGAAAGCTTCAATCTCGATCACCTTCTCCTCGAATATTTTGATGCCAGCGAAGAAGCTTACGACATATGCGAAACCCTCCTCCGGGGAGTCAACAAAACACGCATATATTACTGTGAAATCAGAAGGGTGATTAAGTTAAGCAAAAGAGCGTACAATCACCCTCACTTCAGTGCTATTATTGGAGAATTAGCCTCGTTTTCAGTCCTTGAAAATCCATTATCCATCATCAGCCCCCTCCAATTTCGCGAGTACCACGATGGGTACTTGTTATTACTTGAAAAACTTGGATCAAAAGGCAGAAAAATTCGCAGAAAGTTAGCTTTCAAGAAACTTTTGAAGAAAGTTGGAGGAATCAGCCTTATAATATCAAACACCGTCCTTCTGATTGCGTTAGTACTTTTCGCCTTCCATAGTGTGGTCGGCATTGTTGCAGTACCTGCATTGGCAGCCTGTTTCATGGGTATGATGAAGAAGAAGATGAAATGGCCGAGTTCGAAAGTTTTCAAAACAACAAAATCTCTCGAAAGAATCAGAGAGCAACTCGATTACGCTTCGAAAGGGATTTACATAATGATCAATGATTTCAACACGTTGAGCAGGATGGCGATGAGACTGCAAGACGACGTAGATCACTGGAAAGCCATTGCAGAGCTGTGCGTCAAGAATGGGAAATATGAGCTGCTGAAGGAGGCCGTAAAGGAATTTCATGTTCACGATTCGAGTTTTCTGGAGCAGTTGGAAGAGCTTGAGCAGCACATTTACTTGTGCTATCTCACAATGAATAGATCGAGAGTGCTTATATTGCAAGCAATAATGGCGGCCAACCAGCCGAAAAGATGGTGA 1104 41.58 VRKLTSFFFVLFYPGRSQRETVNGLPIKLSVNEEYLGAFRTKSYIEMSDRVHKKLETTASTSKSSSTSTHLSEYLIEPRQETLKSILESFNLDHLLLEYFDASEEAYDICETLLRGVNKTRIYYCEIRRVIKLSKRAYNHPHFSAIIGELASFSVLENPLSIISPLQFREYHDGYLLLLEKLGSKGRKIRRKLAFKKLLKKVGGISLIISNTVLLIALVLFAFHSVVGIVAVPALAACFMGMMKKKMKWPSSKVFKTTKSLERIREQLDYASKGIYIMINDFNTLSRMAMRLQDDVDHWKAIAELCVKNGKYELLKEAVKEFHVHDSSFLEQLEELEQHIYLCYLTMNRSRVLILQAIMAANQPKRW 367
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 19808818 19809921 + Bpe009572.1 Bpe02g01741 99890

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe02g01741 367 PANTHER UPF0496 PROTEIN 3-RELATED 18 363 IPR007749 -
Bpe02g01741 367 PANTHER UPF0496 PROTEIN 2-RELATED 18 363 - -
Bpe02g01741 367 Pfam Protein of unknown function (DUF677) 59 358 IPR007749 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe02g01741 - - - qsu:112000008 344.354
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g01741 Bpe-Chr2:19808818 Bpe07g00930 Bpe-Chr7:15219664 1.37E-35 dispersed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g1170 . . . . . . . . . Cmo12g00344 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Blo18g00766 . Bda01g01545 Bpe02g01741 . Bma01g00716 . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0012387 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 0 1 1 1 1 1 1 1 1 1 1 1 1 29
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bpe02g01741 Bpe_Chr02 FPKM 27.323944 26.321669 10.894129 10.106974 24.288322 23.440887 25.914894 4.942562 5.367876 4.77064