Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe02g01745 ATGTTTCTGAGCTTAGCGACGTCCGGATTATTTGAAGTTTTGCTTTGCGTCGTAGTTTCTTTGTTCGCCATTGTTATTGCGGATGATCCTTACCGATTCTACGAGTGGAATGTTACTTTCGGAGACATTTATCCACTCGGTGTAAAACAGCAGGGAATACTCATCAATGGGCAATTTCCAGGACCCGATGTTCATTCTGCGACCAATGAAAATCTCAGTATTAACGTCCACAACAGTTTGGACGAACCATTCCTCATCTCTTGGAATGGAATTCAGATGAGGAGGAATTCGTTCGAAGATGGAGTGGGTGGAACAACATGCCCAATACCCCCTGGCAAAAACTTCACCTACATTTTCCAAGTGAAGGATCAGATTGGGAGCTTCTTCTATTTCCCTTCTCTTGCATTTCACAAAGCTGCTGGTGGTTTTGGTGGAATCAGGATTTTTACCCGCCCCCGAATTCCCCTTCCATTCCCGGACCCTGCTGGTGATTTCACCGTCCTCATTGGAGATTGGTACACGGCTAATCACACGAGTTTGAGAGAGAAATTGGATTGCGGAAAAAAGCTTCCATTTCCTGATGGCATTCTCATCAATGGCCGCTGCACCAGCGGCGCTTGGTTTATCGTGGAAAAAGGTATACATAAATCATATGTAGATCCTGGGAAAACTTATAGGCTGAGAATATCAAACGTGGGTTTGCAGAATTCGCTCAACTTCCGAATTCAAGGACACAAATTGACCCTCATTGAAGTAGAGGGAACCCATACAGTTCAAAACAGCTACTCTTCACTTGATGTTCATGTTGGTCAGTCTTGTTCTGTTCTTCTCATGGCCGACCAACCTTCTCAGGACTATTACATTGTTGTTAGCACTCGCTTCACCGCCTTGATTCTCACCTCCACTGCCACTCTCCGCTATGCCAACTCGGTCGGTCCGGTCCAAGGCCCACCTCCTGATGGCCCCACTGTCCAAATTGGCTTTTCCCTTAACCAAGCTCGCTCCATCAGGACTAATCTCACAGCCAGTGGACCAAGGCTGAACCCACAAGGCTCATACCATTACAGTCTCATTAACATAACTAAAACCATCGTCCTTACCAGCTCTGCTGGTCCAGTGAACGGAAAGCAAAGATATGCAGTTAATGGCGTATCACATGTCGCCCCCGACACCCCCCTCAAGGTCGCCGATTATTACAAAATCGACGGAGTCTTCCGCGTTGGAAGCATATCTGACAGACCCTATGATAATGAAATATACCTGGACACATCAGTTTTAGGTGTTGACTACAGAGCGTTTGTGGAGATTGTGTTCCAAAACAACGAAGATATGATTCAGAGTTGGCATCTTGATGGATACAATTTCTTCGTCGTCGGGATGGATGGAGGGCAATGGACTGAGTCTAGCCGAGATCATTACAATCTAAGAGATGCCATCAACCGTTGCACAACTCAAGTCTTGCCTACATTTTCTGCTTTATTTTCGGCTGGATCTTTGGTAGAGGGAATGGATCTACCTGGGTTGAAATATGATCCACGTCTTTTGTTGCATGGACAACAATACATAGAAATCTACAATCCATTACCGTCTAGTGGCTGTATACAAAATAAAGTTAGCCTTGCTGGATTGCACGATAAAGGTAAAGCAGCTATTCTTGAGCTAGAAACAAAAAGCTACAACAAAGAGTCTGGTGAACTGTTATGCATGAACCGAACTACTGCCTTCCTCCGAGGTGCTGGTGGCTTCTCAAGTTCCTCTCATCCCTATTCTTATTCAAACTATAAACCAGATAAACCCATTAGAATACCAAAAACACAACCTTCTGCAGTGTTTGAGGATTATATCCAGCCATCTCAGGCAAATGGTGTGAGTTTGATCTTTTTGTTCTGTCTACAGGCGTTATTGTATAGGCTGTCTGGCGACTACAATCCTCTTCATTCAGATCCACTTGTTGCCAAAAATGCAGGGTTCACGAAGCCGATTCTTCATGGGTTGTGCACACTGGGATTTGCCGTGAGGGCAATCATCAAGTGCATTTGTAGAGGAGATCCAAGTATGGTGAAATCTATATCAGGCAGATTTCTTCTGCATGTTTACCCAGGAGAATCTTTGATCACAGACATGTGGCTTGAAGGATCCAGGGTGTTGTATCAGACAAAGGTGAAAGAACGCAACCGAACTGTACTATCCGGCTACGTAGACATCAATAGATTTGCTTCGTCACTTTAA 2229 44.77 MFLSLATSGLFEVLLCVVVSLFAIVIADDPYRFYEWNVTFGDIYPLGVKQQGILINGQFPGPDVHSATNENLSINVHNSLDEPFLISWNGIQMRRNSFEDGVGGTTCPIPPGKNFTYIFQVKDQIGSFFYFPSLAFHKAAGGFGGIRIFTRPRIPLPFPDPAGDFTVLIGDWYTANHTSLREKLDCGKKLPFPDGILINGRCTSGAWFIVEKGIHKSYVDPGKTYRLRISNVGLQNSLNFRIQGHKLTLIEVEGTHTVQNSYSSLDVHVGQSCSVLLMADQPSQDYYIVVSTRFTALILTSTATLRYANSVGPVQGPPPDGPTVQIGFSLNQARSIRTNLTASGPRLNPQGSYHYSLINITKTIVLTSSAGPVNGKQRYAVNGVSHVAPDTPLKVADYYKIDGVFRVGSISDRPYDNEIYLDTSVLGVDYRAFVEIVFQNNEDMIQSWHLDGYNFFVVGMDGGQWTESSRDHYNLRDAINRCTTQVLPTFSALFSAGSLVEGMDLPGLKYDPRLLLHGQQYIEIYNPLPSSGCIQNKVSLAGLHDKGKAAILELETKSYNKESGELLCMNRTTAFLRGAGGFSSSSHPYSYSNYKPDKPIRIPKTQPSAVFEDYIQPSQANGVSLIFLFCLQALLYRLSGDYNPLHSDPLVAKNAGFTKPILHGLCTLGFAVRAIIKCICRGDPSMVKSISGRFLLHVYPGESLITDMWLEGSRVLYQTKVKERNRTVLSGYVDINRFASSL 742
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 19839791 19846420 - Bpe009576.1 Bpe02g01745 99894

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe02g01745 742 CDD HDE_HSD 603 733 - -
Bpe02g01745 742 PANTHER OSJNBA0084K11.18 PROTEIN 15 527 - -
Bpe02g01745 742 SUPERFAMILY Cupredoxins 357 488 IPR008972 -
Bpe02g01745 742 Gene3D - 162 344 IPR008972 -
Bpe02g01745 742 Pfam MaoC like domain 632 727 IPR002539 -
Bpe02g01745 742 Gene3D Hotdog Thioesterase 464 740 - -
Bpe02g01745 742 Pfam Multicopper oxidase 38 150 IPR011707 GO:0005507
Bpe02g01745 742 PANTHER MULTI-COPPER OXIDASE 15 527 IPR045087 -
Bpe02g01745 742 Pfam Multicopper oxidase 391 488 IPR011706 GO:0005507|GO:0016491
Bpe02g01745 742 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 484 588 IPR029069 -
Bpe02g01745 742 SUPERFAMILY Cupredoxins 25 178 IPR008972 -
Bpe02g01745 742 SUPERFAMILY Cupredoxins 158 344 IPR008972 -
Bpe02g01745 742 CDD CuRO_1_AAO_like_1 33 148 IPR034273 GO:0005507
Bpe02g01745 742 Gene3D - 31 152 IPR008972 -
Bpe02g01745 742 Pfam Multicopper oxidase 164 309 IPR001117 -
Bpe02g01745 742 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 633 733 IPR029069 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe02g01745 - - - tcc:18591654 767.689
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g01745 Bpe-Chr2:19839791 Bpe06g00228 Bpe-Chr6:12322262 0 dispersed
Bpe02g00325 Bpe-Chr2:2111468 Bpe02g01745 Bpe-Chr2:19839791 0 wgd
Bpe02g01745 Bpe-Chr2:19839791 Bpe05g00167 Bpe-Chr5:5277572 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g139 . . . . . . . . Cmo05g00335 . . . . . Sed11g1117 . . Bhi04g00089 Tan02g2797 Cmetu03g2098 . Hepe10g0193 . Lcy13g1873 Cla08g01389 Cam08g1862 Cec08g1441 Cco08g1573 Clacu08g1556 . Cre08g1340 . . . Cone20ag0047 . . . Cme03g01547 . Blo18g00759 . Bda01g01549 Bpe02g01745 . Bma01g00713 . . . . . Cma05g00334 Car05g00278 . . . . . . . . . . . . . . . . . Lsi08g01279 . Chy03g01055 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000048 7 10 7 9 7 11 7 11 13 11 8 10 14 9 12 16 10 16 4 10 12 10 16 10 14 12 11 19 23 4 333
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bpe02g01745 Bpe_Chr02 FPKM 0.0 0.0 5.114384 4.770326 0.0 0.405473 0.0 0.050594 0.0 0.114263