Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe02g01755 ATGGACGGGGACAGAAATGAAGGTGGCGCAGAGATTTTGGACGAAGAGGGTGATTTTAGCACGTCCAATCCTCCCGAGGAATTGCCTGTTGCTCAAGGCTTGGTGGCAATAATTGAATGTGTGGCTCAATATGGAGATTATAAAAGGACTCAGAGAAAGGAATGTTATAACCTTGTGCGGCGCATGAAGTTATTATTGCCGCTTTTTGAAGAATTACGGGATTTGGAAACGACGATACAGGAGAATGGCGTTGTTTGGTTGTGCAATCTGAAGAAGGCTTTGCTTGCGGCCAATAAATTGTTAAAAACCTGTAATGAGGGAAGCAAGATTTATTTGGCCCTCGAAAATGAAGCGATTATGATCAAATTTAAGGGCGTTTATGATAAAATGATCAAAGCTTTGGATGGTTTGCCACATGATGAACTGGGGGTCTCAGATGAAGTAACAGAAGAGGTAGAGCTGATGCGCACGCAACTTAAACGAGCAAAAAGACGCACAGACACCCAGGATATAGAACTTGCAATGGATATAATGGTGGTACTCTCTAAACAGGATGAAAGAAATGCAGATAGTGTCATAATAGAAAGAATTGCAAAGAAGCTTGACTTGCAAAGCATTGAGAATATTAAACTAGAAACCATGGCTGTAAAAGCCCTTGTAAAAAAAAGAGGTGGACCAAATGCAGAGAGTACCCAGCTTATCATCGATTTGCTTCAAAAGTTCAGACTGGCAGCTGGGATGGAAAACAGCAGCATTCTTGATGATCCTGTTATGCCTAAAACGCTTGACAAATGCCCTTCTCTGGTGATTCCCCATGAATTCCTATGTCCAATCACCCTCGAAATAATGACAGATCCTGTTATCATTGCCAGCGGACAGACGTATGAGAGAGAGAGCATAGAGAAGTGGTTCGAAACCAACCATCGGACATGTCCGAAAACCAGGCAGACTCTTGCTCACCTAGCTTTGGCGCCCAATTATGCGTTGAAAAACCTTATATTGCAGTGGTGCGAGAAGCATAAATTCCAGCTTCCCAAGAAGGACACATGTGCAGGACTGGAGAGCTCCTACCCTGAACACAAAGAGGAAATCCATTATCTGGTTGAGAACCTTTCATCCAGTCAGTTAGATGTGCAGAGAAAAACTGTGATGAAAATACGGATGCTCTCGAAAGAGAATTCTGAAAATAGAGTTTTGATAGCTAATGGTGGAGGAATTCCACCTCTCGTGCATCTCCTCTCATATCCTGATTCCAAGATTCAAGAGCATGCGGTTACAGCCTTGTTGAATTTGTCAATTGATGAAGCCAACAAAACGTTGATTGCTAGGGAAGGGGCCATCCCAGCCATTATTGAAGTTCTGCAGAAAGGCAGCATTGAAGCCAAAGAGAACTCTGCAGCAGCCTTGTTTAGCTTATCAATGGTGGACGAGAATAAGCTAACTGTTGGGCTGTCCAACGGTATACCACCTTTGGTTGATTTGTTGCAAAATGGTACAATTAGAGGTAAAAAAGATGCGGCCACTGCTCTGTTCAACCTATCTCTAAACCAAGGAAACAAGGCAAGAGCCATTAGTGCAGGCATTGTCACGCCCTTGCTCCATCTACTGAAGGACCGAAACTTGGGCATGGTTGATGAAGCCCTCTCCATCTTCTTGCTTCTCTCGTCACACCCAGATGGGCGGCAGGAAATTGGGCAGCTATCATTTATTGAAACTCTGGTCGAGTTTATTCGAGAAGGAAATCCTAAGAACAAGGAATGTGCAACTTCGGTTCTGCTCGAGCTGGGTTCGAAGAATTCGTCCTGCATTTTGGCTGCACTTCAGCTTGGAGTCTACGAGCATTTGGTTGAGGTCTCAAACACCGGAACAAATCGAGCCAAGAGAAAATCGATTGCACTCTTGCAGCTCATGAGCAAAAGTGAGCAAATTCCTTGA 1935 43.98 MDGDRNEGGAEILDEEGDFSTSNPPEELPVAQGLVAIIECVAQYGDYKRTQRKECYNLVRRMKLLLPLFEELRDLETTIQENGVVWLCNLKKALLAANKLLKTCNEGSKIYLALENEAIMIKFKGVYDKMIKALDGLPHDELGVSDEVTEEVELMRTQLKRAKRRTDTQDIELAMDIMVVLSKQDERNADSVIIERIAKKLDLQSIENIKLETMAVKALVKKRGGPNAESTQLIIDLLQKFRLAAGMENSSILDDPVMPKTLDKCPSLVIPHEFLCPITLEIMTDPVIIASGQTYERESIEKWFETNHRTCPKTRQTLAHLALAPNYALKNLILQWCEKHKFQLPKKDTCAGLESSYPEHKEEIHYLVENLSSSQLDVQRKTVMKIRMLSKENSENRVLIANGGGIPPLVHLLSYPDSKIQEHAVTALLNLSIDEANKTLIAREGAIPAIIEVLQKGSIEAKENSAAALFSLSMVDENKLTVGLSNGIPPLVDLLQNGTIRGKKDAATALFNLSLNQGNKARAISAGIVTPLLHLLKDRNLGMVDEALSIFLLLSSHPDGRQEIGQLSFIETLVEFIREGNPKNKECATSVLLELGSKNSSCILAALQLGVYEHLVEVSNTGTNRAKRKSIALLQLMSKSEQIP 644
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 19899061 19901746 + Bpe009586.1 Bpe02g01755 99904
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe02g01755 644 Gene3D - 27 139 IPR036537 GO:0007166
Bpe02g01755 644 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 404 446 IPR000225 GO:0005515
Bpe02g01755 644 CDD RING-Ubox_PUB 274 316 IPR045210 -
Bpe02g01755 644 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 486 528 IPR000225 GO:0005515
Bpe02g01755 644 SMART Ubox_2 273 336 IPR003613 GO:0004842|GO:0016567
Bpe02g01755 644 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 270 344 IPR013083 -
Bpe02g01755 644 SUPERFAMILY RING/U-box 270 344 - -
Bpe02g01755 644 MobiDBLite consensus disorder prediction 1 24 - -
Bpe02g01755 644 Pfam Armadillo/beta-catenin-like repeat 476 514 IPR000225 GO:0005515
Bpe02g01755 644 Pfam Armadillo/beta-catenin-like repeat 393 432 IPR000225 GO:0005515
Bpe02g01755 644 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 445 487 IPR000225 GO:0005515
Bpe02g01755 644 SUPERFAMILY ARM repeat 364 640 IPR016024 -
Bpe02g01755 644 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 15 24 641 - -
Bpe02g01755 644 PANTHER U BOX DOMAIN-CONTAINING 24 641 - -
Bpe02g01755 644 Pfam U-box domain 270 341 IPR003613 GO:0004842|GO:0016567
Bpe02g01755 644 Gene3D - 348 643 IPR011989 -
Bpe02g01755 644 ProSiteProfiles U-box domain profile. 269 343 IPR003613 GO:0004842|GO:0016567
Bpe02g01755 644 Coils Coil 145 165 - -
Bpe02g01755 644 SMART arm_5 516 556 IPR000225 GO:0005515
Bpe02g01755 644 SMART arm_5 434 474 IPR000225 GO:0005515
Bpe02g01755 644 SMART arm_5 557 597 IPR000225 GO:0005515
Bpe02g01755 644 SMART arm_5 393 433 IPR000225 GO:0005515
Bpe02g01755 644 SMART arm_5 475 515 IPR000225 GO:0005515
Bpe02g01755 644 SMART arm_5 599 639 IPR000225 GO:0005515
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g01755 Bpe-Chr2:19899061 Bpe11g00764 Bpe-Chr11:5755923 3.85E-175 dispersed
Bpe02g01755 Bpe-Chr2:19899061 Bpe02g01758 Bpe-Chr2:19917990 4.37E-16 proximal
Bpe02g00304 Bpe-Chr2:2003848 Bpe02g01755 Bpe-Chr2:19899061 5.27E-18 wgd
Bpe02g01755 Bpe-Chr2:19899061 Bpe06g00004 Bpe-Chr6:76505 1.02E-24 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe02g01755 - - jre:109016026 926.776