Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe02g01758 ATGTCTGAAAGTTGGGATGGAAGCGATGACCCCAGTAGCCAATCGGACGAGAGCATTTATGAAAGATTTCACATCGAACCTATTTATGATGCATTTGTCTGCCCTTTGACGAAGCAAGTGATGCGTGATCCTGTTACTCTAGAAAATGGGCAAACTTTTGAACGAGAAGCAATTGAAAAGTGGTTCAAGGAATGCAAGGATTGTGGAAAGAAGCTAGTCTGTCCATTGACTCTGAAAGAGCTGAGAAGCACTGATCTGAACCCTAGCATTGCTCTACGAAACACCATTGAAGAATGGATTGCCAGGAATGAATCTGCTAAGCTTGATGGGGCTCGTAGATCATTGAATCTGGCAAGCTCAGAAAGTGATATATTGCTATCGCTCAAATATGTTAAATACATCTGCCAAAAGAGCCGATCCAATAAGCATGTCACACGTAATTCCGGGCTAATACCTATGATTATTGATTTGTTGAAGAGCAGCAGCAGAACTGTTCGCAGTAAAGCCTTGGAGACACTTTGTATTGTCGTGCAGGAAGATGATGATAACAAGGAAATATTCGCCGAGGGTGACACTGTACGCACTATAGTGAAGTTCTTGTGGCATGAACTTTCTCAAGAGAGGGAGGAAGCTGTCTCTTTGTTATATGAGCTCTCTAAGTCTGGAATCTTGTGCGAGAAAATAGGATCAATCAATGGTGCAATTTTACTTTTGGTTCGAATGGCAAGCAGCAAATCGCAGAATCTCTTAACTGTTGAGAAGGCTGAAAAAACACTGGAGAATTTGGCGAAGTTTGAGAATTATGTGAGACAGATGGCTGAGTATGGTAGACTACAACCTCTTCTAACGTGTATCCTTGAAGCCCCACCAGAATTGAAACTCTCAATGGCGACCTTCTTGGGCGAACTGGTTCTAGATAATGATGTCAAGGTCCTTGTGGCTAAAACTGTTGGATCATCTTTGATCAATTTGATGAGAAGTGGTAACAAGCACTCAAGAGAAGCTGCTTTGAAAGCTCTAAACCAGATCTCCTCTTTTGAGAATAGTGCAAAAGTGTTGATAGAGGAAGGAATACTTCCACCCCTTGTGAGGGACCTTTTCACAGTTGGTGCCAACCAACTTCCAATGAGACTAAAAGAGGTCTCTGCAACAATACTTGCCAATGTAGTCAACTCCGGCTATGAGTTAGATTCCATACCAGTCGGACCTGATCAGCAGACTACTCTTGTCTCGGAAGACATAGTCCATAATCTGCTACATCTCATTAGCAACACTGGTCCAGCTATTGAATGCAAGCTTCTCCAGGTTCTTGTCGGACTTACTAATTCTCCATCGACTGTTCTGAATGTTGTTTCTTCAATAAAAAGTTCAGGTGCAACCATCAGTTTAGTTCAGTTTATCGAGGCTCCACAGCATGATTTGCGCTTGGCTTCCATAAAACTTCTCCACAACCTTTCCCTGCACATGGCTCCCGACATAGCAGATGCCTTGCATAGCACAGCTAGCCAACTTGTGAGTCTGTTTAGAATCATGTCAGAAAATACTGGAATAATGGAAGAGCAAGCAGCTGCAGTTGGTCTCTTAGCTGAACTTCCGGAGAGGGATTTGGGGCTCAGCCGACAGATGCTTAATGAAGATGCATTTACAATGGTCCACTCTAGAATAATGATGATTCAGCAAGGGGAGACTCGGGGCAGCCGCTTTGTTACACCATTTCTTGAAGGCTTAGTACGGATTCTTGCAAGGATTACAGTTATCTTGGCCGATGAGCCCGATGCTATTGCATTTTGCCGTAATCACAATATCGCTGCTTTGTTCATTGAATTGCTTCAGTCTAATGGACTTGACAATGTGCAGATGGTTTCTGCCATAGCGTTAGAGAACTTGTCTGCAGAATCCAAAAATTTGACACAAATCCAAGAGTTGCCCACACCTGGTTTTTGTGCCTCGATTTTTCCATGTTTTGCCAAACCACCTGTAATGACAGGATTGTGTAGGCTCCATAAGGGTAAATGTTCTTTGAGAGAAAGCTTTTGCCTTTTGGAAGGACATGCAACCGACAAATTAGTTGCTCTTTTGGATCATAGAAACGAGAGGGTTGTTGAGGCAGCTCTTGCGGCAATTTCTACTTTGTTGGATGATGGGGTGGAAATTGAACAAGGGGTGTTTGTGTTGTGGGATGTAGAAGGAGTGAAGGCTATACTTGATGTTTTAGTTGAAAAGCGTACAGAAAATCTACGGAGGAGGAGTGTTTGGGTGGTCGAAAGACTCTTGAGGACCGAGGAAATCGCAAAAGAAGTTTCCGGAAATCCAAACTTGAATACAGCTCTTGTGGATGCATACCAGCACGGCGACTATCGAACCCGGCAAATTGCTGAGCAGGCCCTGAAACATGTGGATAAGCTACCAAACTTCTCTGGAATCTTTCAAAACATGGGATGA 2442 43.37 MSESWDGSDDPSSQSDESIYERFHIEPIYDAFVCPLTKQVMRDPVTLENGQTFEREAIEKWFKECKDCGKKLVCPLTLKELRSTDLNPSIALRNTIEEWIARNESAKLDGARRSLNLASSESDILLSLKYVKYICQKSRSNKHVTRNSGLIPMIIDLLKSSSRTVRSKALETLCIVVQEDDDNKEIFAEGDTVRTIVKFLWHELSQEREEAVSLLYELSKSGILCEKIGSINGAILLLVRMASSKSQNLLTVEKAEKTLENLAKFENYVRQMAEYGRLQPLLTCILEAPPELKLSMATFLGELVLDNDVKVLVAKTVGSSLINLMRSGNKHSREAALKALNQISSFENSAKVLIEEGILPPLVRDLFTVGANQLPMRLKEVSATILANVVNSGYELDSIPVGPDQQTTLVSEDIVHNLLHLISNTGPAIECKLLQVLVGLTNSPSTVLNVVSSIKSSGATISLVQFIEAPQHDLRLASIKLLHNLSLHMAPDIADALHSTASQLVSLFRIMSENTGIMEEQAAAVGLLAELPERDLGLSRQMLNEDAFTMVHSRIMMIQQGETRGSRFVTPFLEGLVRILARITVILADEPDAIAFCRNHNIAALFIELLQSNGLDNVQMVSAIALENLSAESKNLTQIQELPTPGFCASIFPCFAKPPVMTGLCRLHKGKCSLRESFCLLEGHATDKLVALLDHRNERVVEAALAAISTLLDDGVEIEQGVFVLWDVEGVKAILDVLVEKRTENLRRRSVWVVERLLRTEEIAKEVSGNPNLNTALVDAYQHGDYRTRQIAEQALKHVDKLPNFSGIFQNMG 813
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 19917990 19921369 + Bpe009589.1 Bpe02g01758 99907
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe02g01758 813 SUPERFAMILY ARM repeat 118 444 IPR016024 -
Bpe02g01758 813 Gene3D - 576 804 IPR011989 -
Bpe02g01758 813 ProSiteProfiles U-box domain profile. 27 106 IPR003613 GO:0004842|GO:0016567
Bpe02g01758 813 CDD RING-Ubox_PUB 32 77 IPR045210 -
Bpe02g01758 813 SUPERFAMILY RING/U-box 23 106 - -
Bpe02g01758 813 Gene3D - 105 317 IPR011989 -
Bpe02g01758 813 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 10 104 IPR013083 -
Bpe02g01758 813 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 43 1 811 - -
Bpe02g01758 813 SUPERFAMILY ARM repeat 378 799 IPR016024 -
Bpe02g01758 813 Gene3D - 318 486 IPR011989 -
Bpe02g01758 813 PANTHER RING-TYPE E3 UBIQUITIN TRANSFERASE 1 811 - -
Bpe02g01758 813 Pfam U-box domain 30 104 IPR003613 GO:0004842|GO:0016567
Bpe02g01758 813 SMART arm_5 138 178 IPR000225 GO:0005515
Bpe02g01758 813 SMART arm_5 306 345 IPR000225 GO:0005515
Bpe02g01758 813 SMART arm_5 590 631 IPR000225 GO:0005515
Bpe02g01758 813 SMART arm_5 346 391 IPR000225 GO:0005515
Bpe02g01758 813 SMART arm_5 672 713 IPR000225 GO:0005515
Bpe02g01758 813 SMART arm_5 180 220 IPR000225 GO:0005515
Bpe02g01758 813 SMART Ubox_2 31 99 IPR003613 GO:0004842|GO:0016567
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe02g00304 Bpe02g01758 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe01g00086 Bpe-Chr1:546082 Bpe02g01758 Bpe-Chr2:19917990 3.78E-98 dispersed
Bpe02g00304 Bpe-Chr2:2003848 Bpe02g01758 Bpe-Chr2:19917990 0 dispersed
Bpe02g01758 Bpe-Chr2:19917990 Bpe13g01362 Bpe-Chr13:18852945 2.04E-108 dispersed
Bpe02g01755 Bpe-Chr2:19899061 Bpe02g01758 Bpe-Chr2:19917990 4.37E-16 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe02g01758 - - qsu:112023650 1238.02