Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe02g01775 | ATGATGATCGGCGAACGGAACCGTCTCAATCCCACCATTCAGATCCCTGATTGGAACCCCCTTGATGATTCGACGGTGGTGCCTTCTCCGTTTTCCCCCATGAATAGTCCCTCTGCTCTGGACCCTGTTATGGCGCTCCACCGTTTCCTCCCGTCTAATGAGTCTGATTTTCCCAACAAGGAGATGGACGCCTTCTCGTGTGACCATTTCAGAATGTTTGAGTTCAAGGTAAAGATGTGCGCGCGGGGAAGGTCACACGATTGGACGGAATGTCCCTATGCGCATCCTGGAGAGAAGGCTCGCCGGAGAGATCCAGTGAAGTATCGTTACTCCGGCTCCTCGTGCCCTGATTTGCGGAAAGGTATTTGTAAGAAGGGCGATTCCTGCGAGTTCGCCCACGGAGTCTTCGAGTGTTGGCTACATCCGGCTCGGTACCGGACTCAGCCGTGCAAGGACGGAATAGGTTGCCGTCGGCGGGTGTGTTTCTTCGCACACTCCGCGGAACAACTCCGCGTTCTTCCTCAGCAGGGTCCTGTGGTTCGCGGATCTACCGAGTCCTTCGAAGGATCTCCGATTCGTCGGGCGTTTGAAATTAACATGACTAAGGGGTACCCTTGTCTGTCATCGCCAACGTCAATCTTGAATTCCCCGCCGTTATCTCCTTCCGACTCGCCGCCAATGTCTCCCGTCAGCCCTCAAGTCGGCGGCGGATTCGGATCGCCCAAGTCTGTCTATGAACTTCTCACTTCAATGCGTAATCTCCACGTTGGCAATACGAAACCAAGCCGTCAAAGAGAGAAACCATCGGTTAGTTCTCTTCGCAGTTCCACTCTCCGACCTGCTTTCTGTGATTCACCTACGCGAACCCATATTCCGGCTCGCCCCGGAGGGAGTTTCTGTGATTTTTGGGACCAAGCTTTAATGGAAGATCCTGCAATGGAGAGGGTGGAGTCTGGAAGAGACATCCGAGCTCAAATGTATGTCAAACTCAGTCAGGAAAACTCACTCGGCTCGGCCGACCCGGCTCCTGATATTGGGTGGGTCTCCGAGTTAGTCAAGTGA | 1062 | 53.86 | MMIGERNRLNPTIQIPDWNPLDDSTVVPSPFSPMNSPSALDPVMALHRFLPSNESDFPNKEMDAFSCDHFRMFEFKVKMCARGRSHDWTECPYAHPGEKARRRDPVKYRYSGSSCPDLRKGICKKGDSCEFAHGVFECWLHPARYRTQPCKDGIGCRRRVCFFAHSAEQLRVLPQQGPVVRGSTESFEGSPIRRAFEINMTKGYPCLSSPTSILNSPPLSPSDSPPMSPVSPQVGGGFGSPKSVYELLTSMRNLHVGNTKPSRQREKPSVSSLRSSTLRPAFCDSPTRTHIPARPGGSFCDFWDQALMEDPAMERVESGRDIRAQMYVKLSQENSLGSADPAPDIGWVSELVK | 353 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 20086533 | 20087594 | + | Bpe009607.1 | Bpe02g01775 | 99924 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe02g01775 | 353 | MobiDBLite | consensus disorder prediction | 256 | 290 | - | - | |
Bpe02g01775 | 353 | Gene3D | - | 106 | 176 | - | - | |
Bpe02g01775 | 353 | Pfam | Zinc finger C-x8-C-x5-C-x3-H type (and similar) | 115 | 134 | IPR000571 | GO:0046872 | |
Bpe02g01775 | 353 | SMART | c3hfinal6 | 109 | 135 | IPR000571 | GO:0046872 | |
Bpe02g01775 | 353 | SMART | c3hfinal6 | 144 | 167 | IPR000571 | GO:0046872 | |
Bpe02g01775 | 353 | PANTHER | UNKEMPT FAMILY MEMBER | 7 | 353 | IPR045234 | - | |
Bpe02g01775 | 353 | PANTHER | ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 20 | 7 | 353 | - | - | |
Bpe02g01775 | 353 | MobiDBLite | consensus disorder prediction | 256 | 283 | - | - | |
Bpe02g01775 | 353 | ProSiteProfiles | Zinc finger C3H1-type profile. | 109 | 136 | IPR000571 | GO:0046872 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe01g00577 | Bpe-Chr1:3758965 | Bpe02g01775 | Bpe-Chr2:20086533 | 1.17E-88 | dispersed | |
Bpe02g01775 | Bpe-Chr2:20086533 | Bpe02g02219 | Bpe-Chr2:23235449 | 3.38E-123 | dispersed | |
Bpe02g01775 | Bpe-Chr2:20086533 | Bpe13g01268 | Bpe-Chr13:17880145 | 4.40E-126 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
21002 | PF00642 | zf-CCCH | 2.70E-05 | CL0537 | Bpe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe02g01775 | - | - | vvi:100247549 | 400.979 |