Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bpe02g01776 | ATGGAATCTGTTGGTGTTTTTCCTGATGGAGAATGGGACTCGTTCTGTTCAATTTTCGACTCTGACGAGGTCAATTCACTGCCTCGCTATCTCGGAAACTTTGCGTTGCTGGAAAATTATGATGCCGGCCTGAATTCTGCACCACAGACTTGCTTCGATCCTCCTGCCAGTATAGGTGTTCATCGGCCTAACAAGAGCTGGTGTCATTCTCTTGATGCTTTGACTGCTGATTTCGACCAGATCAAACATGATTATCGCCACAGTTCGTATCACAGTTTCCAACCAAATGATATATCTCTTTTCATTGATATGAATTCAATGGGTGTTAAAAAGACTTGTTCATTTCCGCCATCTCTGACTGAAAATTTAGACGAAGATCATCATCGAGCTCTATGTTTGGGTGGCCATACAGGTAGTCAAGGATTTGAGAATTTAGACTATAATCTTCCAACCTCGACGGATATAAAATCCAGCGACGAAGAAGAAAAACTCAAAAGGAAGCTAAATGGTAGAGCGCAGAATACACAGTTAGCCTTCAACGCAAAGAAGAAAAATCGAGTCTCTCAGAATGTACAAAAGAGGGTAAAAACTGTAGAGTCGCCGAAATCAACTTATAAAAGCGTGAAGATTTCTTCAAAAACCAGTGTTCAAGAAGACGGTAATGGAGGATCTGAAGGACAGAGCTCCACTGGTAATACAGATGACGAAAATGCTTCACGTGATACCAATTGTTGTGCAACTTCAGCGTCTAAAAGGAGGGAAGTTCTCAACTCCAACGGAAAAACAACAGCTGCAAGAGGGTCAGCTACTGATCCACAAAGTATCTACGCAAGAAAACGAAGAGAGAGAATAAATGAGAGACTCAGAATCTTGCAAAAACTGGTTCCTAATGGCACGAAGGTCGATATAAGCACAATGCTCGAAGAAGCAGTTCACTACGTGAAGTTTCTGCAGCTTCAAATCAAGCTCTTAAGCTCTGACGATCATTGGATGTATGCTCCAATCGCATACAATGGAATGGACATTGGTCTGCACCAGTAA | 1041 | 41.98 | MESVGVFPDGEWDSFCSIFDSDEVNSLPRYLGNFALLENYDAGLNSAPQTCFDPPASIGVHRPNKSWCHSLDALTADFDQIKHDYRHSSYHSFQPNDISLFIDMNSMGVKKTCSFPPSLTENLDEDHHRALCLGGHTGSQGFENLDYNLPTSTDIKSSDEEEKLKRKLNGRAQNTQLAFNAKKKNRVSQNVQKRVKTVESPKSTYKSVKISSKTSVQEDGNGGSEGQSSTGNTDDENASRDTNCCATSASKRREVLNSNGKTTAARGSATDPQSIYARKRRERINERLRILQKLVPNGTKVDISTMLEEAVHYVKFLQLQIKLLSSDDHWMYAPIAYNGMDIGLHQ | 346 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 2 | 20088959 | 20090462 | - | Bpe009608.1 | Bpe02g01776 | 99925 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bpe02g01776 | 346 | PANTHER | TRANSCRIPTION FACTOR BHLH83-RELATED | 4 | 345 | - | - | |
| Bpe02g01776 | 346 | MobiDBLite | consensus disorder prediction | 168 | 243 | - | - | |
| Bpe02g01776 | 346 | PANTHER | TRANSCRIPTION FACTOR BHLH54 | 4 | 345 | - | - | |
| Bpe02g01776 | 346 | Pfam | Helix-loop-helix DNA-binding domain | 278 | 318 | IPR011598 | GO:0046983 | |
| Bpe02g01776 | 346 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 268 | 317 | IPR011598 | GO:0046983 | |
| Bpe02g01776 | 346 | CDD | bHLH_AtIND_like | 269 | 331 | - | - | |
| Bpe02g01776 | 346 | MobiDBLite | consensus disorder prediction | 170 | 243 | - | - | |
| Bpe02g01776 | 346 | Gene3D | - | 271 | 333 | IPR036638 | GO:0046983 | |
| Bpe02g01776 | 346 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 270 | 334 | IPR036638 | GO:0046983 | |
| Bpe02g01776 | 346 | SMART | finulus | 274 | 323 | IPR011598 | GO:0046983 |
Event-related genes
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| Bpe02g00449 | Bpe02g01776 | CCT | |
| Bpe02g01776 | Bpe02g00449 | ECH | |
| Bpe02g00449 | Bpe02g01776 | ECH | |
| Bpe02g01776 | Bpe05g00472 | BCT |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Bpe02g00449 | Bpe-Chr2:2940436 | Bpe02g01776 | Bpe-Chr2:20088959 | 4.06E-54 | dispersed | |
| Bpe02g01776 | Bpe-Chr2:20088959 | Bpe01g00640 | Bpe-Chr1:4315263 | 7.03E-19 | dispersed | |
| Bpe10g00678 | Bpe-Chr10:13312033 | Bpe02g01776 | Bpe-Chr2:20088959 | 5.03E-20 | dispersed | |
| Bpe05g00472 | Bpe-Chr5:19025974 | Bpe02g01776 | Bpe-Chr2:20088959 | 1.92E-60 | transposed | |
| Bpe11g00010 | Bpe-Chr11:75226 | Bpe02g01776 | Bpe-Chr2:20088959 | 1.41E-25 | transposed | |
| Bpe11g01227 | Bpe-Chr11:9172418 | Bpe02g01776 | Bpe-Chr2:20088959 | 1.69E-24 | transposed | |
| Bpe02g01776 | Bpe-Chr2:20088959 | Bpe05g00025 | Bpe-Chr5:524999 | 3.29E-19 | wgd |
Transcription factors information
| Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
|---|---|---|---|---|---|---|---|
| 21003 | PF00010 | HLH | 1.00E-08 | No_clan | Bpe | TF |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bpe02g01776 | - | - | qsu:112027126 | 246.899 |