Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe02g01776 ATGGAATCTGTTGGTGTTTTTCCTGATGGAGAATGGGACTCGTTCTGTTCAATTTTCGACTCTGACGAGGTCAATTCACTGCCTCGCTATCTCGGAAACTTTGCGTTGCTGGAAAATTATGATGCCGGCCTGAATTCTGCACCACAGACTTGCTTCGATCCTCCTGCCAGTATAGGTGTTCATCGGCCTAACAAGAGCTGGTGTCATTCTCTTGATGCTTTGACTGCTGATTTCGACCAGATCAAACATGATTATCGCCACAGTTCGTATCACAGTTTCCAACCAAATGATATATCTCTTTTCATTGATATGAATTCAATGGGTGTTAAAAAGACTTGTTCATTTCCGCCATCTCTGACTGAAAATTTAGACGAAGATCATCATCGAGCTCTATGTTTGGGTGGCCATACAGGTAGTCAAGGATTTGAGAATTTAGACTATAATCTTCCAACCTCGACGGATATAAAATCCAGCGACGAAGAAGAAAAACTCAAAAGGAAGCTAAATGGTAGAGCGCAGAATACACAGTTAGCCTTCAACGCAAAGAAGAAAAATCGAGTCTCTCAGAATGTACAAAAGAGGGTAAAAACTGTAGAGTCGCCGAAATCAACTTATAAAAGCGTGAAGATTTCTTCAAAAACCAGTGTTCAAGAAGACGGTAATGGAGGATCTGAAGGACAGAGCTCCACTGGTAATACAGATGACGAAAATGCTTCACGTGATACCAATTGTTGTGCAACTTCAGCGTCTAAAAGGAGGGAAGTTCTCAACTCCAACGGAAAAACAACAGCTGCAAGAGGGTCAGCTACTGATCCACAAAGTATCTACGCAAGAAAACGAAGAGAGAGAATAAATGAGAGACTCAGAATCTTGCAAAAACTGGTTCCTAATGGCACGAAGGTCGATATAAGCACAATGCTCGAAGAAGCAGTTCACTACGTGAAGTTTCTGCAGCTTCAAATCAAGCTCTTAAGCTCTGACGATCATTGGATGTATGCTCCAATCGCATACAATGGAATGGACATTGGTCTGCACCAGTAA 1041 41.98 MESVGVFPDGEWDSFCSIFDSDEVNSLPRYLGNFALLENYDAGLNSAPQTCFDPPASIGVHRPNKSWCHSLDALTADFDQIKHDYRHSSYHSFQPNDISLFIDMNSMGVKKTCSFPPSLTENLDEDHHRALCLGGHTGSQGFENLDYNLPTSTDIKSSDEEEKLKRKLNGRAQNTQLAFNAKKKNRVSQNVQKRVKTVESPKSTYKSVKISSKTSVQEDGNGGSEGQSSTGNTDDENASRDTNCCATSASKRREVLNSNGKTTAARGSATDPQSIYARKRRERINERLRILQKLVPNGTKVDISTMLEEAVHYVKFLQLQIKLLSSDDHWMYAPIAYNGMDIGLHQ 346
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
2 20088959 20090462 - Bpe009608.1 Bpe02g01776 99925
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Bpe02g01776 346 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 4 345 - -
Bpe02g01776 346 MobiDBLite consensus disorder prediction 168 243 - -
Bpe02g01776 346 PANTHER TRANSCRIPTION FACTOR BHLH54 4 345 - -
Bpe02g01776 346 Pfam Helix-loop-helix DNA-binding domain 278 318 IPR011598 GO:0046983
Bpe02g01776 346 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 268 317 IPR011598 GO:0046983
Bpe02g01776 346 CDD bHLH_AtIND_like 269 331 - -
Bpe02g01776 346 MobiDBLite consensus disorder prediction 170 243 - -
Bpe02g01776 346 Gene3D - 271 333 IPR036638 GO:0046983
Bpe02g01776 346 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 270 334 IPR036638 GO:0046983
Bpe02g01776 346 SMART finulus 274 323 IPR011598 GO:0046983
       

Event-related genes


       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g00449 Bpe-Chr2:2940436 Bpe02g01776 Bpe-Chr2:20088959 4.06E-54 dispersed
Bpe02g01776 Bpe-Chr2:20088959 Bpe01g00640 Bpe-Chr1:4315263 7.03E-19 dispersed
Bpe10g00678 Bpe-Chr10:13312033 Bpe02g01776 Bpe-Chr2:20088959 5.03E-20 dispersed
Bpe05g00472 Bpe-Chr5:19025974 Bpe02g01776 Bpe-Chr2:20088959 1.92E-60 transposed
Bpe11g00010 Bpe-Chr11:75226 Bpe02g01776 Bpe-Chr2:20088959 1.41E-25 transposed
Bpe11g01227 Bpe-Chr11:9172418 Bpe02g01776 Bpe-Chr2:20088959 1.69E-24 transposed
Bpe02g01776 Bpe-Chr2:20088959 Bpe05g00025 Bpe-Chr5:524999 3.29E-19 wgd
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21003 PF00010 HLH 1.00E-08 No_clan Bpe TF
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe02g01776 - - qsu:112027126 246.899