Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe02g01777 ATGGCTCTTGAAGCTCTTACCTCTCCCTTGGCCCCGTCGCCGGTGTTTCAGTGCGACGATCCCGATATCAACTGCTTGGAACCATGGACCAAGGGGAAGCGGTCCAAGCGCCCGCGTTTAGACGGCGCAGAGACAGAGGAAGAGTATCTCGCTCTCTGCCTTATCATGCTCGCTCGCGGCGGTGCTTCCTTTTCGACTCACCCGAAAACTGCTGCTCCGTCCACGCCGAAGCTCAACTACAAGTGTTCTGTTTGCGATAAGGCGTTTTCGTCGTACCAGGCTTTGGGGGGACACAAGGCGAGCCACAGGAAACTTGTTGGTGGAGAAGATCGATCGATGTCATCCACTGCTACGACGACTTCTGCTCTAACAGCAGCGACCTCCGGTTCAGCTTCTATGGCTGGAGTAAGAACTCACGAATGCTCTATTTGCCACAAGACCTTTCCGACGGGGCAGGCCTTGGGTGGACACAAGCGGTGCCACTACGAAGGCGGCAATAAATCTAGCAGCGCCACGGTGACCTCGTCGGAAGGAATCGGCAGCTCCAGCCATAACCGAGGCTTCGATCTGAACCTCCCTGCTTTGCCGGAATTTGCTCCGAAATTCCTGGTCTCCGGCGACGACGAGGTAGAGAGCCCTCTACCCACAAAGAAACCCCGACTCTTGACGCAACCAAAAATCGAAATCTCTCAAGATCATTGA 702 55.27 MALEALTSPLAPSPVFQCDDPDINCLEPWTKGKRSKRPRLDGAETEEEYLALCLIMLARGGASFSTHPKTAAPSTPKLNYKCSVCDKAFSSYQALGGHKASHRKLVGGEDRSMSSTATTTSALTAATSGSASMAGVRTHECSICHKTFPTGQALGGHKRCHYEGGNKSSSATVTSSEGIGSSSHNRGFDLNLPALPEFAPKFLVSGDDEVESPLPTKKPRLLTQPKIEISQDH 233
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 20099498 20100199 + Bpe009609.1 Bpe02g01777 99926
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe02g01777 233 MobiDBLite consensus disorder prediction 165 184 - -
Bpe02g01777 233 ProSiteProfiles Zinc finger C2H2 type domain profile. 139 161 IPR013087 -
Bpe02g01777 233 Gene3D Classic Zinc Finger 77 161 - -
Bpe02g01777 233 ProSitePatterns Zinc finger C2H2 type domain signature. 141 161 IPR013087 -
Bpe02g01777 233 Pfam C2H2-type zinc finger 139 162 - -
Bpe02g01777 233 Pfam C2H2-type zinc finger 80 104 - -
Bpe02g01777 233 PANTHER ZINC FINGER PROTEIN ZAT10 1 224 - -
Bpe02g01777 233 ProSitePatterns Zinc finger C2H2 type domain signature. 82 102 IPR013087 -
Bpe02g01777 233 ProSiteProfiles Zinc finger C2H2 type domain profile. 80 102 IPR013087 -
Bpe02g01777 233 PANTHER C2H2 TYPE ZINC FINGER TRANSCRIPTION FACTOR FAMILY-RELATED 1 224 IPR044653 GO:0003700
Bpe02g01777 233 MobiDBLite consensus disorder prediction 206 233 - -
Bpe02g01777 233 SUPERFAMILY beta-beta-alpha zinc fingers 80 161 IPR036236 -
Bpe02g01777 233 SMART c2h2final6 80 102 IPR013087 -
Bpe02g01777 233 SMART c2h2final6 139 161 IPR013087 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g00448 Bpe-Chr2:2936702 Bpe02g01777 Bpe-Chr2:20099498 4.29E-99 dispersed
Bpe02g01777 Bpe-Chr2:20099498 Bpe13g00773 Bpe-Chr13:14210229 4.55E-24 dispersed
Bpe12g00739 Bpe-Chr12:12941951 Bpe02g01777 Bpe-Chr2:20099498 4.06E-58 transposed
Bpe02g01777 Bpe-Chr2:20099498 Bpe04g00161 Bpe-Chr4:1047120 8.08E-96 wgd
Bpe02g01777 Bpe-Chr2:20099498 Bpe05g00044 Bpe-Chr5:773304 1.73E-92 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21004 PF13912 zf-C2H2_6 2.20E-12 CL0361 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe02g01777 - - tcc:18591995 283.108