Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe02g01778 ATGAGCTGCAACGGGTGCAGAGTGCTGAGAAAAGGGTGTAACAAGACGTGCGAAATGCGATCATGCCTGCGCTGGATAGACTCGCCGGACGCCCAAGCTAACGCCACCTTGTTCCTTGCTAAGTTCTTTGGCCGGATCGACCTCTTGTCCTTCATCTCTGCCGTACCTGATCATGAAAGACCCGCTTTGTTTAAGTCGCTGTTATACGAAGCTTGTGGAAGAACAGTGAATCCAGTGAACGGAGCGATCGGGCTATTAGCGACCGGGAAATGGAACGTTTGCGAGGCTGCAGTGGAAACGGTTCTCTCCGGCCGCGTTCCCCTTCAAATTCAGGGACATACAGCTGCACTTCGAACGCCGATATTTGAAGAAACTTTACTCCCACCCAATAATGGCACATGCACTGAGCTCATCGCACCTCGCCTCTTCTATCGATCTTCGCTGTCCGCCGTCCAAGCAAGGGAATGTCAACCGTTCGATTTCGGCAATCTCTCTCAGACAAAACTCCCAGGGCATGTCACCGGAAGTGGCAGCCATGGCTCTAGTAAAGATCTTAAGCTGCTTAACTTATTTGTCTGA 579 51.47 MSCNGCRVLRKGCNKTCEMRSCLRWIDSPDAQANATLFLAKFFGRIDLLSFISAVPDHERPALFKSLLYEACGRTVNPVNGAIGLLATGKWNVCEAAVETVLSGRVPLQIQGHTAALRTPIFEETLLPPNNGTCTELIAPRLFYRSSLSAVQARECQPFDFGNLSQTKLPGHVTGSGSHGSSKDLKLLNLFV 192
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 20105653 20106321 + Bpe009610.1 Bpe02g01778 99927
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe02g01778 192 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 125 - -
Bpe02g01778 192 Pfam Lateral organ boundaries (LOB) domain 2 101 IPR004883 -
Bpe02g01778 192 ProSiteProfiles LOB domain profile. 1 107 IPR004883 -
Bpe02g01778 192 PANTHER LOB DOMAIN-CONTAINING PROTEIN 39-LIKE 1 125 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe02g01778 Bpe05g00043 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g01778 Bpe-Chr2:20105653 Bpe13g00123 Bpe-Chr13:7812815 3.65E-52 dispersed
Bpe02g01778 Bpe-Chr2:20105653 Bpe02g01779 Bpe-Chr2:20108402 9.53E-121 tandem
Bpe02g01778 Bpe-Chr2:20105653 Bpe05g00043 Bpe-Chr5:766859 1.76E-98 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21005 PF03195 LOB 6.80E-23 No_clan Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe02g01778 - - mdm:103455907 192.586