Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe02g01779 | TCGAAGATGAGTTGCAACGGGTGCAGAGTGCTGAGAAAAGGGTGTAGCAAGACGTGCGAAATACGATCATGCCTGCGCTGGATAGACTCGCCGGACGCCCAAGCTAACGCCACCTTGTTCCTCGCTAAGTTCTTTGGCCGGACCGACCTCCTGTCCTTGATCTCCGCCGTTCCGGATCATGAAAGACCCGCTTTGTTTAAGTCGCTGTTATACGAAGCTTGTGGAAGAACAGTGAATCCAGTGAACGGAGCGACGGGGCTGTTAGCGTTCGGGAAATGGAACGTTTGCGAGGCTGCGGTGGAAACGGTTCTCTCCGGCGGCGTTCCCCTGCCAATTCAGGGACTTACAGCCGCACTTCCGACGCCTATCTTTGAAGAAACTTTACACCCACCCAATAACGGCACATGCACTGAGCTAACCGCATCTCGCCTCTTCTATCCATCTTCGCTGTCCGCCGTCAAAGCAAGGGAATGCCAACTGTCCGATTTCGGTAATCTCTCTCAAACAAAACTCGCAGGGAGTGTCACCGGAAGCTGCAGCCATGGCGATCGTAAAGATCTGAAGCTGCTGAATTTATTTGTGTGA | 585 | 53.16 | SKMSCNGCRVLRKGCSKTCEIRSCLRWIDSPDAQANATLFLAKFFGRTDLLSLISAVPDHERPALFKSLLYEACGRTVNPVNGATGLLAFGKWNVCEAAVETVLSGGVPLPIQGLTAALPTPIFEETLHPPNNGTCTELTASRLFYPSSLSAVKARECQLSDFGNLSQTKLAGSVTGSCSHGDRKDLKLLNLFV | 194 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 20108402 | 20109076 | + | Bpe009611.1 | Bpe02g01779 | 99928 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe02g01779 | 194 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN 39-LIKE | 3 | 137 | - | - | |
Bpe02g01779 | 194 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN 38 | 3 | 137 | - | - | |
Bpe02g01779 | 194 | Pfam | Lateral organ boundaries (LOB) domain | 4 | 103 | IPR004883 | - | |
Bpe02g01779 | 194 | ProSiteProfiles | LOB domain profile. | 3 | 109 | IPR004883 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe02g01779 | Bpe-Chr2:20108402 | Bpe05g00043 | Bpe-Chr5:766859 | 4.22E-97 | dispersed | |
Bpe02g01778 | Bpe-Chr2:20105653 | Bpe02g01779 | Bpe-Chr2:20108402 | 9.53E-121 | tandem |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
21006 | PF03195 | LOB | 1.40E-22 | No_clan | Bpe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe02g01779 | - | - | mnt:21383826 | 209.149 |