Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe02g01779 TCGAAGATGAGTTGCAACGGGTGCAGAGTGCTGAGAAAAGGGTGTAGCAAGACGTGCGAAATACGATCATGCCTGCGCTGGATAGACTCGCCGGACGCCCAAGCTAACGCCACCTTGTTCCTCGCTAAGTTCTTTGGCCGGACCGACCTCCTGTCCTTGATCTCCGCCGTTCCGGATCATGAAAGACCCGCTTTGTTTAAGTCGCTGTTATACGAAGCTTGTGGAAGAACAGTGAATCCAGTGAACGGAGCGACGGGGCTGTTAGCGTTCGGGAAATGGAACGTTTGCGAGGCTGCGGTGGAAACGGTTCTCTCCGGCGGCGTTCCCCTGCCAATTCAGGGACTTACAGCCGCACTTCCGACGCCTATCTTTGAAGAAACTTTACACCCACCCAATAACGGCACATGCACTGAGCTAACCGCATCTCGCCTCTTCTATCCATCTTCGCTGTCCGCCGTCAAAGCAAGGGAATGCCAACTGTCCGATTTCGGTAATCTCTCTCAAACAAAACTCGCAGGGAGTGTCACCGGAAGCTGCAGCCATGGCGATCGTAAAGATCTGAAGCTGCTGAATTTATTTGTGTGA 585 53.16 SKMSCNGCRVLRKGCSKTCEIRSCLRWIDSPDAQANATLFLAKFFGRTDLLSLISAVPDHERPALFKSLLYEACGRTVNPVNGATGLLAFGKWNVCEAAVETVLSGGVPLPIQGLTAALPTPIFEETLHPPNNGTCTELTASRLFYPSSLSAVKARECQLSDFGNLSQTKLAGSVTGSCSHGDRKDLKLLNLFV 194
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 20108402 20109076 + Bpe009611.1 Bpe02g01779 99928
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe02g01779 194 PANTHER LOB DOMAIN-CONTAINING PROTEIN 39-LIKE 3 137 - -
Bpe02g01779 194 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 3 137 - -
Bpe02g01779 194 Pfam Lateral organ boundaries (LOB) domain 4 103 IPR004883 -
Bpe02g01779 194 ProSiteProfiles LOB domain profile. 3 109 IPR004883 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g01779 Bpe-Chr2:20108402 Bpe05g00043 Bpe-Chr5:766859 4.22E-97 dispersed
Bpe02g01778 Bpe-Chr2:20105653 Bpe02g01779 Bpe-Chr2:20108402 9.53E-121 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21006 PF03195 LOB 1.40E-22 No_clan Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe02g01779 - - mnt:21383826 209.149