Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe02g01798 ATGAAGGTTCATCAATTTGCATGCGGATTCTGGGACCTCGACATATCCTCCCTCTCCCATGGCTGCAACCGACTCCGTCCTCTCGCTCCCAACCTTCAAAACAACACTGATACCGCCATCTCCACCTTTGATCTCAAGAACTACATCAGACCCCATTCCGGCCGTAGATTAAATCCTTCCTTTTCCTTCTCTTCCGACAACAAGCATCCTGGAGGGACAAGGTGGAACCCAACTCAAGAACAGATAGGGATATTGGAGATGCTTCACAGAGGAGGTATGAGAACTCCTAATGGACAAGAAATAGAACAAATCAAAAAACAGCTTTGTAATTATGGGAAAATAGAAGGAAAAAATGTGTTTTATTGGTTTCAAAACCACAAAGCTCAAGAAAGGCAGAAACAGAAGCGAAACAGTCATGGTGTTTGCCATAGCCCAAGAACATCGGTAGCTGACTCTAGGGTAGGACCTGTAATATTTTTCCATTTTTATGATGTTGAAGTTGCAGAAGAAATGGATTCTAATAGAATTTATGTTCAGATAGAAGTAATAGATCGGAGAGAGGAGGATAGTTCGTTCAAGAGAAAGTGCAGAAGCTAG 597 42.38 MKVHQFACGFWDLDISSLSHGCNRLRPLAPNLQNNTDTAISTFDLKNYIRPHSGRRLNPSFSFSSDNKHPGGTRWNPTQEQIGILEMLHRGGMRTPNGQEIEQIKKQLCNYGKIEGKNVFYWFQNHKAQERQKQKRNSHGVCHSPRTSVADSRVGPVIFFHFYDVEVAEEMDSNRIYVQIEVIDRREEDSSFKRKCRS 198
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 20240886 20241621 - Bpe009631.1 Bpe02g01798 99947
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe02g01798 198 MobiDBLite consensus disorder prediction 56 77 - -
Bpe02g01798 198 ProSiteProfiles 'Homeobox' domain profile. 68 133 IPR001356 GO:0003677
Bpe02g01798 198 Gene3D - 73 139 - -
Bpe02g01798 198 SUPERFAMILY Homeodomain-like 68 138 IPR009057 -
Bpe02g01798 198 MobiDBLite consensus disorder prediction 57 77 - -
Bpe02g01798 198 PANTHER WUSCHEL-RELATED HOMEOBOX 4 1 198 IPR044186 GO:0003700|GO:0010067|GO:0010087|GO:0051301
Bpe02g01798 198 CDD homeodomain 73 134 IPR001356 GO:0003677
Bpe02g01798 198 Pfam Homeodomain 73 132 IPR001356 GO:0003677
Bpe02g01798 198 SMART HOX_1 70 137 IPR001356 GO:0003677
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g01798 Bpe-Chr2:20240886 Bpe13g00375 Bpe-Chr13:11501936 6.28E-25 dispersed
Bpe15g01254 Bpe-Chr15:21022524 Bpe02g01798 Bpe-Chr2:20240886 1.34E-27 transposed
Bpe02g01798 Bpe-Chr2:20240886 Bpe05g00030 Bpe-Chr5:583855 1.65E-83 wgd
Bpe02g01798 Bpe-Chr2:20240886 Bpe05g00030 Bpe-Chr5:583855 1.65E-83 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21007 PF00046 Homeodomain 3.10E-16 CL0123 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe02g01798 - - rcu:8288579 218.009