Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe02g01798 | ATGAAGGTTCATCAATTTGCATGCGGATTCTGGGACCTCGACATATCCTCCCTCTCCCATGGCTGCAACCGACTCCGTCCTCTCGCTCCCAACCTTCAAAACAACACTGATACCGCCATCTCCACCTTTGATCTCAAGAACTACATCAGACCCCATTCCGGCCGTAGATTAAATCCTTCCTTTTCCTTCTCTTCCGACAACAAGCATCCTGGAGGGACAAGGTGGAACCCAACTCAAGAACAGATAGGGATATTGGAGATGCTTCACAGAGGAGGTATGAGAACTCCTAATGGACAAGAAATAGAACAAATCAAAAAACAGCTTTGTAATTATGGGAAAATAGAAGGAAAAAATGTGTTTTATTGGTTTCAAAACCACAAAGCTCAAGAAAGGCAGAAACAGAAGCGAAACAGTCATGGTGTTTGCCATAGCCCAAGAACATCGGTAGCTGACTCTAGGGTAGGACCTGTAATATTTTTCCATTTTTATGATGTTGAAGTTGCAGAAGAAATGGATTCTAATAGAATTTATGTTCAGATAGAAGTAATAGATCGGAGAGAGGAGGATAGTTCGTTCAAGAGAAAGTGCAGAAGCTAG | 597 | 42.38 | MKVHQFACGFWDLDISSLSHGCNRLRPLAPNLQNNTDTAISTFDLKNYIRPHSGRRLNPSFSFSSDNKHPGGTRWNPTQEQIGILEMLHRGGMRTPNGQEIEQIKKQLCNYGKIEGKNVFYWFQNHKAQERQKQKRNSHGVCHSPRTSVADSRVGPVIFFHFYDVEVAEEMDSNRIYVQIEVIDRREEDSSFKRKCRS | 198 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 20240886 | 20241621 | - | Bpe009631.1 | Bpe02g01798 | 99947 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe02g01798 | 198 | MobiDBLite | consensus disorder prediction | 56 | 77 | - | - | |
Bpe02g01798 | 198 | ProSiteProfiles | 'Homeobox' domain profile. | 68 | 133 | IPR001356 | GO:0003677 | |
Bpe02g01798 | 198 | Gene3D | - | 73 | 139 | - | - | |
Bpe02g01798 | 198 | SUPERFAMILY | Homeodomain-like | 68 | 138 | IPR009057 | - | |
Bpe02g01798 | 198 | MobiDBLite | consensus disorder prediction | 57 | 77 | - | - | |
Bpe02g01798 | 198 | PANTHER | WUSCHEL-RELATED HOMEOBOX 4 | 1 | 198 | IPR044186 | GO:0003700|GO:0010067|GO:0010087|GO:0051301 | |
Bpe02g01798 | 198 | CDD | homeodomain | 73 | 134 | IPR001356 | GO:0003677 | |
Bpe02g01798 | 198 | Pfam | Homeodomain | 73 | 132 | IPR001356 | GO:0003677 | |
Bpe02g01798 | 198 | SMART | HOX_1 | 70 | 137 | IPR001356 | GO:0003677 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe02g01798 | Bpe-Chr2:20240886 | Bpe13g00375 | Bpe-Chr13:11501936 | 6.28E-25 | dispersed | |
Bpe15g01254 | Bpe-Chr15:21022524 | Bpe02g01798 | Bpe-Chr2:20240886 | 1.34E-27 | transposed | |
Bpe02g01798 | Bpe-Chr2:20240886 | Bpe05g00030 | Bpe-Chr5:583855 | 1.65E-83 | wgd | |
Bpe02g01798 | Bpe-Chr2:20240886 | Bpe05g00030 | Bpe-Chr5:583855 | 1.65E-83 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
21007 | PF00046 | Homeodomain | 3.10E-16 | CL0123 | Bpe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe02g01798 | - | - | rcu:8288579 | 218.009 |