Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe02g01799 ATGGACGGAGAGTGCTGCAGCTCCGCCGCTTCGAGCTCGGAGAAGAGGAAGCAGAAGGACAACCGGCAAGAGAAGCCTTACAGAGGCATAAGGATGAGGAAGTGGGGAAAGTGGGTTGCTGAAATTAGAGAACCGAATAAAAGGTCTAGGATTTGGCTAGGGTCTTACACAACTCCGATCGCCGCCGCTCGTGCGTATGACACCGCCGTGTTTTACCTCCGGGGACCGTCTGCTCGCCTGAATTTTCCCGAGCTGATCTTCCAAGAAGATCAGCTAAACGACATGTCCGCAGCTTCAATACGGAAAAAGGCCACCGAGGTTGGAGCGAGGGTGGACGCAATCGAAGCTTCTCTTAACGCCTCCAAGTGTAATTCTTCTCAGCTCTCGGAAAAACCTGATTTAAACGAGTTTCCAGACCCAGAAAACTCCGACAACGAAGACCATCTTCTGTGA 453 51.88 MDGECCSSAASSSEKRKQKDNRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPIAAARAYDTAVFYLRGPSARLNFPELIFQEDQLNDMSAASIRKKATEVGARVDAIEASLNASKCNSSQLSEKPDLNEFPDPENSDNEDHLL 150
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 20246667 20247119 - Bpe009632.1 Bpe02g01799 99948
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe02g01799 150 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-1-RELATED 9 144 - -
Bpe02g01799 150 MobiDBLite consensus disorder prediction 13 27 - -
Bpe02g01799 150 Pfam AP2 domain 27 75 IPR001471 GO:0003700|GO:0006355
Bpe02g01799 150 ProSiteProfiles AP2/ERF domain profile. 26 83 IPR001471 GO:0003700|GO:0006355
Bpe02g01799 150 SUPERFAMILY DNA-binding domain 26 84 IPR016177 GO:0003677
Bpe02g01799 150 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-1-RELATED 9 144 - -
Bpe02g01799 150 MobiDBLite consensus disorder prediction 122 150 - -
Bpe02g01799 150 Gene3D AP2/ERF domain 26 84 IPR036955 GO:0003700|GO:0006355
Bpe02g01799 150 MobiDBLite consensus disorder prediction 134 150 - -
Bpe02g01799 150 MobiDBLite consensus disorder prediction 1 27 - -
Bpe02g01799 150 PRINTS Ethylene responsive element binding protein signature 65 85 IPR001471 GO:0003700|GO:0006355
Bpe02g01799 150 PRINTS Ethylene responsive element binding protein signature 27 38 IPR001471 GO:0003700|GO:0006355
Bpe02g01799 150 CDD AP2 27 85 IPR001471 GO:0003700|GO:0006355
Bpe02g01799 150 SMART rav1_2 26 89 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g00436 Bpe-Chr2:2846045 Bpe02g01799 Bpe-Chr2:20246667 4.28E-72 dispersed
Bpe02g01799 Bpe-Chr2:20246667 Bpe15g00328 Bpe-Chr15:14794749 6.01E-58 dispersed
Bpe14g00301 Bpe-Chr14:3026381 Bpe02g01799 Bpe-Chr2:20246667 1.85E-29 transposed
Bpe02g01799 Bpe-Chr2:20246667 Bpe04g00175 Bpe-Chr4:1131799 1.48E-70 wgd
Bpe02g01799 Bpe-Chr2:20246667 Bpe05g00031 Bpe-Chr5:611547 3.51E-97 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21008 PF00847 AP2 8.80E-12 CL0081 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe02g01799 K09286 - csv:101219005 223.016