Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe02g01840 ATGGGTTGCGATGGGGAGCTTCTGGTTCAAAACGTTTGCAAGTTGTACGGGCAAATCTCGAAGCTGTCAAGCCTCGAACCCTCCAAAGAAGTGAACGAGCTCTTCACTGAGCTCGTCCTCGCCTGCATCCCACCAATCCCCATTGACGTAACCAAGCTCTGCGACAGGGTTCAGGAAATGAGGTCCAACCTCATTAAGGTATGTGGCGAAGCAGAGGGACATTTAGAGAGCCATTTCTCGTCCATTTTAGGCTCCTTTTCAAACCCACTGGACCACCTCAATCTTTTCCCTTATTACTCAAATTATATCAAACTTTGCCAGCTTGAATTCAATATTCTCATGCAGCATTGCTCTCATTTTACGCCCAACAAAATTGCCTTCGTGGGTTCTGGCTCTCTCCCTCTTACCTCCATTGTTTTGGCCTCCAACCACCTTCCCACCACCGTTTTTCACAATTACGACATCGACCCATTAGCTAACTCTAAGGCTTTTCGTTTAGTCTCCTCTCATCCTGATCTATCCAAGAGACTGTTTTTTCACACCACTGACATACTCAAAGTGACAGATGGCTTGAAACAGTACGATGTGGTGTTTTTAGCAGCTCTTGTTGGCATGGATAAGGAAGAAAAAGGTACAGTAATTGATCATTTGTCTAACTTCATGGCGGCTGGATCTTATCTTATGTTGAGGAGTGCTCATGGCGCTCGAGGTTTTCTCTACCCAGTGGTTGAGACTTGTGACTTACAAGGGTTTGATGTTCTTTCTGTGTTTCATCCAACTGATGAGATCATAAACTCTGTGGTGATTGCTCGTAAATTTTATCTGCCTTCGACCGAGCTGCAAGAAAATCACCATCTTTTGCTGCCTAACAAGTGTTCTGAGATTCAGGTTTTTAACCCCCTTCACCGCGGGAATATGCTTGAAGATTTTGCAATTGAAGCCGACCAGCTTACCTGA 957 45.04 MGCDGELLVQNVCKLYGQISKLSSLEPSKEVNELFTELVLACIPPIPIDVTKLCDRVQEMRSNLIKVCGEAEGHLESHFSSILGSFSNPLDHLNLFPYYSNYIKLCQLEFNILMQHCSHFTPNKIAFVGSGSLPLTSIVLASNHLPTTVFHNYDIDPLANSKAFRLVSSHPDLSKRLFFHTTDILKVTDGLKQYDVVFLAALVGMDKEEKGTVIDHLSNFMAAGSYLMLRSAHGARGFLYPVVETCDLQGFDVLSVFHPTDEIINSVVIARKFYLPSTELQENHHLLLPNKCSEIQVFNPLHRGNMLEDFAIEADQLT 318
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 20532770 20533726 + Bpe009671.1 Bpe02g01840 99989
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe02g01840 318 Pfam Nicotianamine synthase protein 6 273 IPR004298 GO:0030410|GO:0030418
Bpe02g01840 318 PANTHER SYNTHASE, PUTATIVE-RELATED 1 316 - -
Bpe02g01840 318 Gene3D Vaccinia Virus protein VP39 10 274 IPR029063 -
Bpe02g01840 318 PANTHER NICOTIANAMINE SYNTHASE 3 1 316 IPR004298 GO:0030410|GO:0030418
Bpe02g01840 318 ProSiteProfiles Nicotianamine synthase (NAS)-like family profile. 1 277 IPR004298 GO:0030410|GO:0030418
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe02g01840 Bpe09g00561 CCT
Bpe02g01840 Bpe11g01412 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g01840 Bpe-Chr2:20532770 Bpe11g01413 Bpe-Chr11:10515122 1.28E-143 dispersed
Bpe11g01412 Bpe-Chr11:10510840 Bpe02g01840 Bpe-Chr2:20532770 3.11E-144 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe02g01840 K05953 - rcu:8269821 459.529