Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe02g01849 ATGACCAACAAGCTTTCTGACGAACTAACCCAGAAAACAGGCGTTTTTGGTCTCATGGTATGGGAAGTCATCGGGATTGCTGTCGGGTTGTTCATTTTAGTTATCCTATCCATTCTATCATTATGTCTTACATCAAGAAAAAGGTCGAGGAAAGGTAGGGACGAGGTAACTCAGAGTCAAATCCCAACTGTCTCCAAGGAGATCAAAGAGGTTAGAGTGCAGCAATTATCAGCAGCTGAATTTGTTCCTCGCGACGGAATTCTTCTAACCATTCATGACAAATCAAGTGAAAAAGGTTCGGACAAGGTTCTGGTACACCTTGATATGGGGAAGATGAAGAATGGAGATAATAGCAGTCAGTCTGGCTCGTTTCATCAGTTTGATAAAGATGGAGCTGGATCTCAATCAGGAGACGAAGGGAGTTCTGGCAAGATTACCATATATAGACCTTCTTCTTCTTCTTCTTCATATCCGTTGACCGCACCTTCCCCGCTTTCCGGCCTGCCTGAATTTTCTCACTTGGGTTGGGGCCACTGGTTTACGCTCAGAGATCTCGAGGTGGCCACCAATCGATTCTCCAAAGAAAATGTGCTTGGAGAGGGTGGCTATGGAGTTGTTTATCGAGGGCGTCTAGTCAACGGAACTGCAGTGGCTGTTAAAAGGATTCTCAATAATCTGGGTCAGGCAGAGAAAGAATTTAGAGTGGAAGTTGAAGCCATTGGTCACGTCCGCCATAAGAATTTGGTTCGGCTTCTTGGATATTGCATGGAAGGGACTCATAGAATGCTGGTTTATGAGTATGTGAACAATGGAAACTTAGAGCAATGGCTTCATGGAGCTATGCGTCAGCATGGGTACCTTACTTGGGAGGCTCGTACTAAAATTCTACTCGGCACTGCCAAAGCGCTTGCGTATTTGCACGAAGCCATTGAGCCTAAAGTGGTGCATCGTGACATTAAGTCGAGCAACATATTAATTGACGATGACTTCAACGCTAAGGTATCTGACTTTGGCCTGGCCAAGTTGCTTGGTGCTGGAAAAAGTCATGTCACGACTCGAGTTATGGGGACTTTCGGATATGTAGCTCCTGAATATGCAAATACTGGCCTTCTAAATGAGAAGAGTGATGTCTATAGCTTTGGGGTTGTGCTTCTTGAAACGATTACCGGAAGAGATCCTGTAGACTATGGACGGCCTGCACAGGAGGTAAATCTGGTGGATTGGTTAAAAATGATGGTTGGAAGCAGGCGATCAGAAGAAGTTGTTGATCCAAATATGGAGGTAAGGCCATCCACGAGAGCCTTAAAACGTGCGCTTTTGACTGCTTTGAGGTGCGTCGACCCCGATTCTGAAAAGAGACCAAAGATGGGTCAAATTGTTCGAATGCTTGAATCGGAGGAGTATCCACTACCACGAGAGGTTAGTTTTCTTTTTCTTCCCCGTCAACAAGCGTGA 1455 45.36 MTNKLSDELTQKTGVFGLMVWEVIGIAVGLFILVILSILSLCLTSRKRSRKGRDEVTQSQIPTVSKEIKEVRVQQLSAAEFVPRDGILLTIHDKSSEKGSDKVLVHLDMGKMKNGDNSSQSGSFHQFDKDGAGSQSGDEGSSGKITIYRPSSSSSSYPLTAPSPLSGLPEFSHLGWGHWFTLRDLEVATNRFSKENVLGEGGYGVVYRGRLVNGTAVAVKRILNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGYCMEGTHRMLVYEYVNNGNLEQWLHGAMRQHGYLTWEARTKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDDDFNAKVSDFGLAKLLGAGKSHVTTRVMGTFGYVAPEYANTGLLNEKSDVYSFGVVLLETITGRDPVDYGRPAQEVNLVDWLKMMVGSRRSEEVVDPNMEVRPSTRALKRALLTALRCVDPDSEKRPKMGQIVRMLESEEYPLPREVSFLFLPRQQA 484
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 20623860 20626385 - Bpe009681.1 Bpe02g01849 99998
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe02g01849 484 CDD STKc_IRAK 198 464 - -
Bpe02g01849 484 SMART serkin_6 192 463 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe02g01849 484 SUPERFAMILY Protein kinase-like (PK-like) 176 478 IPR011009 -
Bpe02g01849 484 MobiDBLite consensus disorder prediction 115 160 - -
Bpe02g01849 484 PANTHER OS01G0323000 PROTEIN 3 473 - -
Bpe02g01849 484 Pfam Protein kinase domain 193 461 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe02g01849 484 ProSitePatterns Protein kinases ATP-binding region signature. 198 220 IPR017441 GO:0005524
Bpe02g01849 484 Gene3D Transferase(Phosphotransferase) domain 1 268 470 - -
Bpe02g01849 484 ProSitePatterns Serine/Threonine protein kinases active-site signature. 314 326 IPR008271 GO:0004672|GO:0006468
Bpe02g01849 484 PANTHER RECEPTOR-LIKE PROTEIN KINASE-RELATED 3 473 - -
Bpe02g01849 484 ProSiteProfiles Protein kinase domain profile. 192 471 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe02g01849 484 Gene3D Phosphorylase Kinase; domain 1 174 267 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g01849 Bpe-Chr2:20623860 Bpe05g00186 Bpe-Chr5:7996475 0 dispersed
Bpe02g01849 Bpe-Chr2:20623860 Bpe10g00918 Bpe-Chr10:14803184 4.97E-95 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63200 PF00069 Pkinase 4.30E-49 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe02g01849 - - mnt:21405451 813.527