Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe02g01865 ATGCAAGACATTTTTGGGACAGTTCGCCGCTCGCTGGTGTTCCGTTCGTCTCCGGATAATGAAGAGCAGCAGTCGCCTCCTATTGGATCCGGAACCCTAGTTGATAGGATCAATTCTTGCATTCGTAAATCTAAAGTCTTTTCCAGGCCTTCTTCTCCCTCCATCCACCCCGTTCCGAAGGAAATAGTTCCCGCCATTCGATGGCGGAAGGGCGAGTTGATTGGATGCGGGGCCTTCGGTCGCGTCTACATGGGAATGAATCTTGATTCCGGAGAGCTTCTCGCTGTCAAACAGGTTTTGCTCGCATCAAACTGCTCTTCAGAAGAGAAAACGCAGGCTCATATAAAGGACCTCGAAGAAGAAGTGAAGCTTCTTAAAGATCTGTCCCATCCAAATATCGTTAGATACTTGGGTACAATTAGGGAGGAGGATTCTTTAAACATTTTGCTCGAATTTGTCCCTGGTGGGTCCATTTCATCGCTCTTGGGGAAATTTGGAGCTTTTCCTGAGGCCGTTATACAGGCGTACACCAGGCAGTTGTTATTAGGCTTGGAATACTTGCACAGAAATGTTATCATACACAGGGACATTAAAGGAGCAAATATTCTTGTTGATAACAAGGGATGCATTAAGCTTGCAGATTTTGGTGCATCAAAACAGGTTGTTGAGCTGGCTACTATTTCTGGTGCCAAATCTATGAAAGGTACCCCTTACTGGATGGCTCCTGAAGTAATTATTCAGACTGGGCATAGCTTTTCTGCCGATATATGGAGTGTTGGATGCACTGTGATTGAAATGGCCACGGGAAAACCTCCTTGGAGCCAACAATACCAAGAGGTAGCTGCTCTCTTTCATGTTGGGACAACAAAGTCTCATCCACCAATTCCTGAGCATCTCTCTGCTGAAGCAAAAGATTTTCTGCTGAAATGTTTGCAAGAAGAACCAAACCTAAGACCAACTGCATCTGAGCTGCTGAAGCACCCTTTTGTTACTGGAGAAATTATGGAGCCTCAACCTGTTTATTGTTCTCCGGTCATGGTCAGTATGTCTGAATTAATTGACTTGCTTAGATTTTCTTTCAGATTATGTTCTCCTAAAGTGACATTATTATCATCAGGGATGTCCAGAAATAAACTGAGATTTTTCAGGGGAACAAACATCAATACTGAATCAACATGCCAGAGTGATGTCAAAGTTGATTCCATGTCTGATGAAGCAAGGCTTGGGATGGATTTTCCTGAAAGCTTTAAGAGTTTTAACCCAATGTGCGAGCCAACTGATGGCTGGGGATGCGAATGTGTTGAAACTTCAAGAGTGGAGCAGTTGGCCGCAAATCAACAAGTCAATGTGTCAGCTGCCCACACTGAAACACTTGGTGAGGATAAAAACTTTTCATTTGCTTGTGGACCATCACTCTTGGAAGATGATGATGAACTAACGGAGTCCAAAATTACTGCTTTTTTGGATGAAAAGGCTCTGGAACTGAAGAAACTGCAGACACCTTTATACGAGGAGTTCTATAACAGTTTAAATGATCCATGTCCTTCCGGTCTAGTTGAAAATATCCATGATGAGAATCCTTCCAAGTACTTAAAATTGCCTCCAAAAAGCAGGTCACCAAATCAAGGTTCGAGTGGAAACCCATCTACAGCTTCTGATCCTTTGACCACTGGAATCCCTGGTAGATATAGTACATGCACGTCAAATGTCAGTAATGCAAATGATCAAAGTTCACATGAAATTTCATCTCCTCCAGTTAATGACTGGAAAGAGCTTCTAGTTGATGATCAGCGAGAACAAAGTGGCCCAAGTGCTCACTTTTCCAACATACAGAGAAAGTGGAAAGAAGAGCTTGACCAGGAACTTGAAAGAAAAAGAGAAATGATGCGGCAGGCCGGTGTGGGAGGGAAAACATCATCTCCCAAGGATCGAGTCTTCGGCAGACAGCGGGAGAGGACAAGGTTTGCATCTCCAGGAAAATAA 1983 43.72 MQDIFGTVRRSLVFRSSPDNEEQQSPPIGSGTLVDRINSCIRKSKVFSRPSSPSIHPVPKEIVPAIRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLLASNCSSEEKTQAHIKDLEEEVKLLKDLSHPNIVRYLGTIREEDSLNILLEFVPGGSISSLLGKFGAFPEAVIQAYTRQLLLGLEYLHRNVIIHRDIKGANILVDNKGCIKLADFGASKQVVELATISGAKSMKGTPYWMAPEVIIQTGHSFSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHVGTTKSHPPIPEHLSAEAKDFLLKCLQEEPNLRPTASELLKHPFVTGEIMEPQPVYCSPVMVSMSELIDLLRFSFRLCSPKVTLLSSGMSRNKLRFFRGTNINTESTCQSDVKVDSMSDEARLGMDFPESFKSFNPMCEPTDGWGCECVETSRVEQLAANQQVNVSAAHTETLGEDKNFSFACGPSLLEDDDELTESKITAFLDEKALELKKLQTPLYEEFYNSLNDPCPSGLVENIHDENPSKYLKLPPKSRSPNQGSSGNPSTASDPLTTGIPGRYSTCTSNVSNANDQSSHEISSPPVNDWKELLVDDQREQSGPSAHFSNIQRKWKEELDQELERKREMMRQAGVGGKTSSPKDRVFGRQRERTRFASPGK 660
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 20720127 20724965 - Bpe009695.1 Bpe02g01865 100014
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe02g01865 660 MobiDBLite consensus disorder prediction 535 584 - -
Bpe02g01865 660 ProSitePatterns Protein kinases ATP-binding region signature. 74 97 IPR017441 GO:0005524
Bpe02g01865 660 Coils Coil 108 128 - -
Bpe02g01865 660 ProSiteProfiles Protein kinase domain profile. 68 330 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe02g01865 660 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE NPK1-LIKE ISOFORM X1 1 615 - -
Bpe02g01865 660 Gene3D Transferase(Phosphotransferase) domain 1 67 346 - -
Bpe02g01865 660 MobiDBLite consensus disorder prediction 518 586 - -
Bpe02g01865 660 MobiDBLite consensus disorder prediction 643 660 - -
Bpe02g01865 660 Coils Coil 611 631 - -
Bpe02g01865 660 CDD STKc_MAPKKK 67 330 - -
Bpe02g01865 660 MobiDBLite consensus disorder prediction 623 660 - -
Bpe02g01865 660 Pfam Protein kinase domain 69 330 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe02g01865 660 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 1 615 - -
Bpe02g01865 660 SUPERFAMILY Protein kinase-like (PK-like) 59 375 IPR011009 -
Bpe02g01865 660 ProSitePatterns Serine/Threonine protein kinases active-site signature. 192 204 IPR008271 GO:0004672|GO:0006468
Bpe02g01865 660 SMART serkin_6 68 330 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g01865 Bpe-Chr2:20720127 Bpe06g00295 Bpe-Chr6:14077626 5.92E-92 dispersed
Bpe11g00115 Bpe-Chr11:783673 Bpe02g01865 Bpe-Chr2:20720127 1.03E-47 dispersed
Bpe02g01865 Bpe-Chr2:20720127 Bpe03g00512 Bpe-Chr3:25060582 3.51E-66 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63201 PF00069 Pkinase 1.90E-71 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe02g01865 K20606 - qsu:112017510 854.744