Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe02g01889 ATGTCTCCAATGTTGAGCTATGTACTATCAAGAGTGCAAACGTTATCCACTTCCGATCATTCCTCTATTGTGTCCATGAATTTATTTGTGGCGCTACTTTGTGGTTGTATTGTGATTGGTCATCTACTCGAGGAGAATCGCTGGATGAATGAGTCAATTACGGCTCTATTGATTGGACTAAGCACTGGAGTTGTCATACTGCTCATTAGTGGGGGGAAAAATTCACATTTACTAGTCTTCAGTGAAGATCTTTTCTTTATATATCTCCTGCCACCTATTATATTCAATGCCGGGTTCCAGGTGAAAAAGAAGCAGTTTTTCAGAAACTTTAGTACAATTATGCTCTTTGGGGCAATTGGTACATTAATCTCTTGTTGTGTCATTTCATTAGGTGTTATACAATTTTTTAAGAAATTGGATATCGGATCACTGGACATTGGAGATTATTTAGCAATTGGTGCAATTTTTGCTGCTACGGATTCTGTATGCACATTGCAGATTTTGAATCAGGACGAGACACCTTTACTCTACAGTCTTGTATTTGGCGAAGGTGTGGTAAATGATGCTACATCAGTGGTGCTATTCAATGCAATCCAGAGCTTTGATCTCTCCCATATTGATTCCCGGATTGCATTACAATTTATTGGCAGCTTCTTTTACTTATTTTTTACAAGCACTGTTCTGGGTGTGATGACCGGTTTGCTCAGTGCTTTCATCATAAAAAAGCTATATTTTGGCAGGCATTCTACAGACCGCGAGGTTGCTTTAATGATATTAATGGCATACCTTTCATATATGATGGCTGAATTGTTCTATTTAAGTGGCATTCTCACGGTGTTCTTTTGCGGGATCGTGATGTCACATTACACCTGGCACAATGTCACTGAAAGTTCACGAGTTACCACAAAGCATGCTTTTGCTACATTGTCATTTGTAGCTGAGATCTTTATCTTCCTTTACGTTGGCATGGACGCATTGGACATTGAAAAGTGGAGATTTGTCGGCGATAGTCCTGGGACTTCTTTGGCAGTAAGTTCCATACTTTTAGCTCTGGTTATGGCTGGAAGAGCTGCTTTTGTTTTTCCATTATCATTTTTGTCCAACTTAGCAAAAAAAACACCCGCTGAGAAAATTAGCTTCAGGCAGCAAGTGATAATATGGTGGGCTGGTCTGATGAGAGGTGCCGTCTCAATGGCTCTTGCTTATAATCAGTTCACAAGATCAGGTCACACTCAATTGCGTGGGAATGCAATCATGATCACAAGCACTATAACAGTCGTTCTCTTCAGCACAGTGTTGTTTGGGTTAATGACCAAGCCTCTCATTAGGTTCTTGTTGCCTAATCCGAAACCCACATCGAGCATGGTTTTGTCCGATCCATCCACTCCCAAATCATTTGTTATTCCACTTCTCGGAGGCAGTCAAGACTTCGAAGTCGATACCGGGGCCCAAGAAATTCCCCGTCCAAGCAGTATTCGAGCCCTTCTAACCACTCCAACACACAATGTTCATCGGTACTGGCGTAAATTTGACGATGCATTTATGCGGCCGGTGTTTGGCGGACGGGGTTTTGTTCCCTATGTGCCTGGATCACCAACAGAGAGGAGTCCCAACCAACGGCAGTGA 1626 42.0 MSPMLSYVLSRVQTLSTSDHSSIVSMNLFVALLCGCIVIGHLLEENRWMNESITALLIGLSTGVVILLISGGKNSHLLVFSEDLFFIYLLPPIIFNAGFQVKKKQFFRNFSTIMLFGAIGTLISCCVISLGVIQFFKKLDIGSLDIGDYLAIGAIFAATDSVCTLQILNQDETPLLYSLVFGEGVVNDATSVVLFNAIQSFDLSHIDSRIALQFIGSFFYLFFTSTVLGVMTGLLSAFIIKKLYFGRHSTDREVALMILMAYLSYMMAELFYLSGILTVFFCGIVMSHYTWHNVTESSRVTTKHAFATLSFVAEIFIFLYVGMDALDIEKWRFVGDSPGTSLAVSSILLALVMAGRAAFVFPLSFLSNLAKKTPAEKISFRQQVIIWWAGLMRGAVSMALAYNQFTRSGHTQLRGNAIMITSTITVVLFSTVLFGLMTKPLIRFLLPNPKPTSSMVLSDPSTPKSFVIPLLGGSQDFEVDTGAQEIPRPSSIRALLTTPTHNVHRYWRKFDDAFMRPVFGGRGFVPYVPGSPTERSPNQRQ 541
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 20861052 20866052 - Bpe009716.1 Bpe02g01889 100038
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe02g01889 541 PANTHER SODIUM/HYDROGEN EXCHANGER 7 539 IPR018422 GO:0006812|GO:0015299|GO:0016021
Bpe02g01889 541 Pfam Sodium/hydrogen exchanger family 28 442 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Bpe02g01889 541 PRINTS Na+/H+ exchanger signature 98 112 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Bpe02g01889 541 PRINTS Na+/H+ exchanger signature 153 163 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Bpe02g01889 541 PRINTS Na+/H+ exchanger signature 113 121 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Bpe02g01889 541 PRINTS Na+/H+ exchanger signature 84 95 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Bpe02g01889 541 TIGRFAM b_cpa1: sodium/hydrogen exchanger 3 26 445 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Bpe02g01889 541 Gene3D - 146 197 - -
Bpe02g01889 541 PANTHER SODIUM/HYDROGEN EXCHANGER 2 7 539 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g01889 Bpe-Chr2:20861052 Bpe05g00855 Bpe-Chr5:21739042 0 dispersed
Bpe01g00798 Bpe-Chr1:9085609 Bpe02g01889 Bpe-Chr2:20861052 9.66E-33 transposed
Bpe02g01873 Bpe-Chr2:20764189 Bpe02g01889 Bpe-Chr2:20861052 0 transposed
Bpe03g00024 Bpe-Chr3:403680 Bpe02g01889 Bpe-Chr2:20861052 6.91E-12 transposed
Bpe06g00499 Bpe-Chr6:16214655 Bpe02g01889 Bpe-Chr2:20861052 0 transposed
Bpe11g00564 Bpe-Chr11:4330297 Bpe02g01889 Bpe-Chr2:20861052 0 transposed
Bpe02g01889 Bpe-Chr2:20861052 Bpe05g00261 Bpe-Chr5:15529673 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe02g01889 - - zju:107412105 917.531