Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe02g01889 | ATGTCTCCAATGTTGAGCTATGTACTATCAAGAGTGCAAACGTTATCCACTTCCGATCATTCCTCTATTGTGTCCATGAATTTATTTGTGGCGCTACTTTGTGGTTGTATTGTGATTGGTCATCTACTCGAGGAGAATCGCTGGATGAATGAGTCAATTACGGCTCTATTGATTGGACTAAGCACTGGAGTTGTCATACTGCTCATTAGTGGGGGGAAAAATTCACATTTACTAGTCTTCAGTGAAGATCTTTTCTTTATATATCTCCTGCCACCTATTATATTCAATGCCGGGTTCCAGGTGAAAAAGAAGCAGTTTTTCAGAAACTTTAGTACAATTATGCTCTTTGGGGCAATTGGTACATTAATCTCTTGTTGTGTCATTTCATTAGGTGTTATACAATTTTTTAAGAAATTGGATATCGGATCACTGGACATTGGAGATTATTTAGCAATTGGTGCAATTTTTGCTGCTACGGATTCTGTATGCACATTGCAGATTTTGAATCAGGACGAGACACCTTTACTCTACAGTCTTGTATTTGGCGAAGGTGTGGTAAATGATGCTACATCAGTGGTGCTATTCAATGCAATCCAGAGCTTTGATCTCTCCCATATTGATTCCCGGATTGCATTACAATTTATTGGCAGCTTCTTTTACTTATTTTTTACAAGCACTGTTCTGGGTGTGATGACCGGTTTGCTCAGTGCTTTCATCATAAAAAAGCTATATTTTGGCAGGCATTCTACAGACCGCGAGGTTGCTTTAATGATATTAATGGCATACCTTTCATATATGATGGCTGAATTGTTCTATTTAAGTGGCATTCTCACGGTGTTCTTTTGCGGGATCGTGATGTCACATTACACCTGGCACAATGTCACTGAAAGTTCACGAGTTACCACAAAGCATGCTTTTGCTACATTGTCATTTGTAGCTGAGATCTTTATCTTCCTTTACGTTGGCATGGACGCATTGGACATTGAAAAGTGGAGATTTGTCGGCGATAGTCCTGGGACTTCTTTGGCAGTAAGTTCCATACTTTTAGCTCTGGTTATGGCTGGAAGAGCTGCTTTTGTTTTTCCATTATCATTTTTGTCCAACTTAGCAAAAAAAACACCCGCTGAGAAAATTAGCTTCAGGCAGCAAGTGATAATATGGTGGGCTGGTCTGATGAGAGGTGCCGTCTCAATGGCTCTTGCTTATAATCAGTTCACAAGATCAGGTCACACTCAATTGCGTGGGAATGCAATCATGATCACAAGCACTATAACAGTCGTTCTCTTCAGCACAGTGTTGTTTGGGTTAATGACCAAGCCTCTCATTAGGTTCTTGTTGCCTAATCCGAAACCCACATCGAGCATGGTTTTGTCCGATCCATCCACTCCCAAATCATTTGTTATTCCACTTCTCGGAGGCAGTCAAGACTTCGAAGTCGATACCGGGGCCCAAGAAATTCCCCGTCCAAGCAGTATTCGAGCCCTTCTAACCACTCCAACACACAATGTTCATCGGTACTGGCGTAAATTTGACGATGCATTTATGCGGCCGGTGTTTGGCGGACGGGGTTTTGTTCCCTATGTGCCTGGATCACCAACAGAGAGGAGTCCCAACCAACGGCAGTGA | 1626 | 42.0 | MSPMLSYVLSRVQTLSTSDHSSIVSMNLFVALLCGCIVIGHLLEENRWMNESITALLIGLSTGVVILLISGGKNSHLLVFSEDLFFIYLLPPIIFNAGFQVKKKQFFRNFSTIMLFGAIGTLISCCVISLGVIQFFKKLDIGSLDIGDYLAIGAIFAATDSVCTLQILNQDETPLLYSLVFGEGVVNDATSVVLFNAIQSFDLSHIDSRIALQFIGSFFYLFFTSTVLGVMTGLLSAFIIKKLYFGRHSTDREVALMILMAYLSYMMAELFYLSGILTVFFCGIVMSHYTWHNVTESSRVTTKHAFATLSFVAEIFIFLYVGMDALDIEKWRFVGDSPGTSLAVSSILLALVMAGRAAFVFPLSFLSNLAKKTPAEKISFRQQVIIWWAGLMRGAVSMALAYNQFTRSGHTQLRGNAIMITSTITVVLFSTVLFGLMTKPLIRFLLPNPKPTSSMVLSDPSTPKSFVIPLLGGSQDFEVDTGAQEIPRPSSIRALLTTPTHNVHRYWRKFDDAFMRPVFGGRGFVPYVPGSPTERSPNQRQ | 541 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 20861052 | 20866052 | - | Bpe009716.1 | Bpe02g01889 | 100038 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe02g01889 | 541 | PANTHER | SODIUM/HYDROGEN EXCHANGER | 7 | 539 | IPR018422 | GO:0006812|GO:0015299|GO:0016021 | |
Bpe02g01889 | 541 | Pfam | Sodium/hydrogen exchanger family | 28 | 442 | IPR006153 | GO:0006812|GO:0015299|GO:0016021|GO:0055085 | |
Bpe02g01889 | 541 | PRINTS | Na+/H+ exchanger signature | 98 | 112 | IPR004709 | GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085 | |
Bpe02g01889 | 541 | PRINTS | Na+/H+ exchanger signature | 153 | 163 | IPR004709 | GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085 | |
Bpe02g01889 | 541 | PRINTS | Na+/H+ exchanger signature | 113 | 121 | IPR004709 | GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085 | |
Bpe02g01889 | 541 | PRINTS | Na+/H+ exchanger signature | 84 | 95 | IPR004709 | GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085 | |
Bpe02g01889 | 541 | TIGRFAM | b_cpa1: sodium/hydrogen exchanger 3 | 26 | 445 | IPR004709 | GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085 | |
Bpe02g01889 | 541 | Gene3D | - | 146 | 197 | - | - | |
Bpe02g01889 | 541 | PANTHER | SODIUM/HYDROGEN EXCHANGER 2 | 7 | 539 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe02g01889 | Bpe-Chr2:20861052 | Bpe05g00855 | Bpe-Chr5:21739042 | 0 | dispersed | |
Bpe01g00798 | Bpe-Chr1:9085609 | Bpe02g01889 | Bpe-Chr2:20861052 | 9.66E-33 | transposed | |
Bpe02g01873 | Bpe-Chr2:20764189 | Bpe02g01889 | Bpe-Chr2:20861052 | 0 | transposed | |
Bpe03g00024 | Bpe-Chr3:403680 | Bpe02g01889 | Bpe-Chr2:20861052 | 6.91E-12 | transposed | |
Bpe06g00499 | Bpe-Chr6:16214655 | Bpe02g01889 | Bpe-Chr2:20861052 | 0 | transposed | |
Bpe11g00564 | Bpe-Chr11:4330297 | Bpe02g01889 | Bpe-Chr2:20861052 | 0 | transposed | |
Bpe02g01889 | Bpe-Chr2:20861052 | Bpe05g00261 | Bpe-Chr5:15529673 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe02g01889 | - | - | zju:107412105 | 917.531 |