Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe02g01920 TTGATCATCGTTTTTTACAGTGGTGGGAGCCTGGTGGCTTATGCTGACGCCAACGCATCTGAAAATGTAAATAAAATTTCATCTGGATCAGATGTGGTTAAGAAAAAGAAGGTGGTAGTGCTTGGAACTGGTTGGGCCGGAACAAGTTTCTTGAAGAATCTTAACGATCCCTCATATGAAGTTCAAGTGGTATCCCCTCGTAATTACTTCGCATTCACTCCGTTGTTGCCAAGCGTTACATGTGGGACAGTTGAAGCCCGCAGCATTGTGGAACCAATCCGTAAAATGGTCAGGAAGAAAAATGTGGATATTCGATTTTGCGAAGCTGAATGTTACAAGATCGATGCAGAAAACAAGAAAATCTTTTGTAGATCTAATCAAACCAACAATCTGAACGGGAAAAAAGAATTTGTAATGGACTATGACTTCCTCGTAATATCTGTCGGAGCACAGGTTAATACGTTCAACACTCCTGGTGTGGTGGAGAATTGTCATTTCTTGAAGGAAGTGGAAGATGCTCAAAGAATTCGAAGGACTGTTATCGACTGTTTTGAGAGGGCGAGTTTACCGACACTAGCAGACGATGAACGAGCAAGAATTCTTCACTTTGCTGTTGTTGGCGGTGGCCCCACTGGTGTAGAATTTGCCGCGGAGCTTCATGATTTTGTCAACGAGGATTTAACAAAATTATATCCAGGAGTTAAAGAACTAGTAAAGATAACTCTTCTTGAGGCCGGAGATCATATTTTGAACATGTTTGACAAAAGAATTACAGCTTTTGCTGAAGAAAAATTTCAAAGAGATGGTATCGATGTCAGAACAGGATCAATGGTTGTCAAAGTAACTGATAAAGAAATTTCTACTAAAGAGCTGAAAAATGGAGAGATTTCTTCCATACCTTATGGAATGGTTGTATGGTCAACTGGGATTGGGACTCGCCCCTTCATCAAAGACTTTATGGCACAAATTGGTCAGACTAACCGGCGTGCTTTGGCAACTGATGAATGGCTGCGAGTCGAAGGATGCAGTAATGTGTATGCACTTGGTGACTGTGCAACAATAAACCAGCGTAAAGTCATGGAAGATATTTCTTCGATCTTTGGCAAAGCAGACAAGGACAATTCGGGAACACTTACAGTCAAAGAATTTCAAGAAGTCATCGATGATGTGTGTGAGAGGTATCCTCAGGTGGAGCTTTATTTAAAGAATAAGCAGATGGGAAACATAGTTGATCTTTTGAAGGAGTCCAAAGGGAATGTTGCTAAGGAATCCATTGAATTGAACATTGAAGAATTTAAATCAACTCTTTCCCAGGTGGATTCACAAATGAAGAATCTTCCGGCAACCGCACAGGTGGCAGCTCAACAAGGTGTTTATCTTGCTAAATGTTTTAACCGTATGGAAGAGTGTGAAAAGTATCCAGAGGGTCCTCTCAGATTCAGGGGATCAGGCCGCCATCGATTTCATCCCTTTCGGTATAAGCATCTGGGACAGTTTGCGCCATTGGGTGGAGAGCAAACCGCTGCTCAACTTCCTGGAGATTGGGTGTCCATTGGCCATAGCAGCCAGTGGCTTTGGTATTCTGTTTATGCAAGGTAA 1599 42.09 LIIVFYSGGSLVAYADANASENVNKISSGSDVVKKKKVVVLGTGWAGTSFLKNLNDPSYEVQVVSPRNYFAFTPLLPSVTCGTVEARSIVEPIRKMVRKKNVDIRFCEAECYKIDAENKKIFCRSNQTNNLNGKKEFVMDYDFLVISVGAQVNTFNTPGVVENCHFLKEVEDAQRIRRTVIDCFERASLPTLADDERARILHFAVVGGGPTGVEFAAELHDFVNEDLTKLYPGVKELVKITLLEAGDHILNMFDKRITAFAEEKFQRDGIDVRTGSMVVKVTDKEISTKELKNGEISSIPYGMVVWSTGIGTRPFIKDFMAQIGQTNRRALATDEWLRVEGCSNVYALGDCATINQRKVMEDISSIFGKADKDNSGTLTVKEFQEVIDDVCERYPQVELYLKNKQMGNIVDLLKESKGNVAKESIELNIEEFKSTLSQVDSQMKNLPATAQVAAQQGVYLAKCFNRMEECEKYPEGPLRFRGSGRHRFHPFRYKHLGQFAPLGGEQTAAQLPGDWVSIGHSSQWLWYSVYAR 532
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 21153824 21157228 + Bpe009746.1 Bpe02g01920 100069
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe02g01920 532 ProSitePatterns EF-hand calcium-binding domain. 371 383 IPR018247 -
Bpe02g01920 532 PRINTS FAD-dependent pyridine nucleotide reductase signature 141 159 - -
Bpe02g01920 532 PRINTS FAD-dependent pyridine nucleotide reductase signature 202 220 - -
Bpe02g01920 532 PRINTS FAD-dependent pyridine nucleotide reductase signature 38 57 - -
Bpe02g01920 532 Gene3D - 28 383 - -
Bpe02g01920 532 Gene3D - 402 532 - -
Bpe02g01920 532 ProSiteProfiles EF-hand calcium-binding domain profile. 358 393 IPR002048 GO:0005509
Bpe02g01920 532 Pfam Pyridine nucleotide-disulphide oxidoreductase 36 360 IPR023753 GO:0016491
Bpe02g01920 532 SUPERFAMILY FAD/NAD(P)-binding domain 35 254 IPR036188 -
Bpe02g01920 532 SUPERFAMILY FAD/NAD(P)-binding domain 202 355 IPR036188 -
Bpe02g01920 532 PANTHER NADH DEHYDROGENASE 4 531 IPR045024 GO:0003954|GO:0006116
Bpe02g01920 532 PANTHER NAD(P)H DEHYDROGENASE B2 4 531 - -
Bpe02g01920 532 SUPERFAMILY EF-hand 312 446 IPR011992 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g01920 Bpe-Chr2:21153824 Bpe15g00698 Bpe-Chr15:17577147 0 dispersed
Bpe14g00677 Bpe-Chr14:5367765 Bpe02g01920 Bpe-Chr2:21153824 0 wgd
Bpe02g01920 Bpe-Chr2:21153824 Bpe08g00354 Bpe-Chr8:2114465 3.82E-60 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe02g01920 K03885 - csv:101204145 948.732