Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe02g01940 ATGGAGTTCCCTACAATTGCCAGCTTAGTGGCGGTTTCAAGGCCGCCTTTATTCCTCTTTCCTCATTCCTCGTTCTTCTTTTGCACCAAACTTCGTGGTTTAATCGTAGATGAAAGTTCCAAGTCGAAGCCATTGGTGCGATTGGTGGTAAAAGATTCTTTATCTAGCAGCTGCAGACACGACGATGAAAATGCAGAGAGGGACATGAATTCTGGAGATTTCTGGAGTGGTTCTGAGAATGTTGAGGTGATTGGCATTGGCAGCAGAAAAGAAGCGGTTCTTGACTTTTGTCTTGATTCGCCTTTCCAGGCTTCATCTCTCCGATTCTGGAGTATTGTGGCTCAAGATTCGCACAAGGTGCAATTGCAGCAAAGGTGCAATACAAAAGATTTTACTTCAAGGGCTATTGAAGTTCCATTAACTATTCAGTCATATTCGAAGGCCATTATTCTTGTAGTCAGTGCTGGATATGGCTTGGATCACACTGCAGCCATAGACCTTGTCAAAACGGTGAGATCAGGAAATGGATTTACTGCTATGGTTATATTAAAACCTTTCAGTTTTGAAGGACAGAGGCGAAAAGATGAGGTTGAAAATTTGGTGGGAAAACTAAAGGAGTACACGAGTTTATTTATCGATATCAACACCGATGAACTTCTCAAAAAGGACTTTGTTACTCTGGATGAGGCCGTGAAAACTTCAAATAATGCTGTACTTTTAGCCATCTATGCTATGACTCTTATCATGTCTGAAATGCAAAGAAAACTCATGAGTGAACCTCATAATAATGTGAAAGAAATCAAAACGGGGGAAATTGTTAGAATTTTGAAAACCTATAAGGAAGGAAAGGTTGGATTTGGAGCTGGTTACAGTCTCAGAACTTCTATTCTGCAATCAATTTATGACTGCCCTTTTCTCAATGATGGTGTAAAGATGTTGGGAGGTGTAGTTATATGCATCCTTGCTAGTTCACGACAACTTGATGATGGAGATATAGATGCCTTTTTGCATACATTTCGCAAAATAACAGGATATTCTAGAGAACTTATTTTATCTACAAGTTGTGAACAAAATATGGAGCCCAACTTGCTGATGACAACAGTTTTGTCTATCGGATTTACAAAGCATGAAAAAACTGAAGAGAGAAGCATTCTATCAAAATTGGCCCAACGTCTACCTTTTATATTTGATCTTTTATGGAGAAATAAAGTCCAACAGAATGAGACTCAAGGAAGGAACGCAATTCTAAATTCGCAAGATGAGTTGGAAACTAGGATGCGTTTACATGGCATGTCTGAAAATTTGGATCAGTTTGATGTGAGTAGAGGATCACAAAACTATGTGGATGAACACTACGCTTCAAGTGGATCTGAAGGAGGTGAAGCAGGATTGTTAGGAAAAGATGCAAGAAATTCCAATTTTAATAATTTTATCATCAAAGGTAAGCCCTTTGAAAGGGTCCCACTGTCCAGATGGAACTTGGATCCTGTATATCAAAATGCACAACTGCGGGCCAGAGAAATTGCAGCTAATTCTGAAGTCGATCCTGCTAGTAACTTTTGCAGTTTTGAACTTCCAGTAGGAGTAAGACCTCCAGCAGAAGGGGAAGGCAGTGACAAAAATTCATTTCTAATCTCGCATGTAGATATGAAAAGCGAAGATAATTCTGAAGTTCCAATTGATAACCCTGGTGCCTCTCTTGGGAACACGTTGACTGATTCAAGTTTTGAAGAAATGAGAGACTTAAATACCGCATCCAAGGGAAAGTATTATGACTTATCTAAGAAGCAAGGAATCTTATCTATTCGTGCTTCATCCATGTTGGAAGCAGAACGCAATTCACCAAAAAAATGGAGTCCTGTTCTTGAGATGCGATTTAGAGGTGGAATTTACAGGGGACGATGCCAAGGAGGTCTTCCAGAAGGGAAGGGTCGTTTAGTTTTTGGAGATGGTAGCATATATGATGGTATGTGGCGCTGTGGCAAAAGATCAGGTTTGGGGACATTCTACTTCATCAATGGAGATGTGTATCAGGGATCATGGAGGGATGATGTGATGCATGGGAAGGGTTGGTTTTATTTTCACACCGAAGACCGTTGGTTTGCAAACTTTTGGAAGGGAAAGGCTCATGGTGAAGGCAGATTCTATTCAAAGTCTGGTGAAGTATTTTTTGGTCTTTTTCATGATGGATGGCGCCATGGTCAGTTCCTTCGTATTGATGTCGACGGCACAAGGTCTGCGGAATATTGGAATGAAGGTGTCCTTGTGAGCCGAGAAGAACTAGATTGTGTAAAATAG 2298 40.43 MEFPTIASLVAVSRPPLFLFPHSSFFFCTKLRGLIVDESSKSKPLVRLVVKDSLSSSCRHDDENAERDMNSGDFWSGSENVEVIGIGSRKEAVLDFCLDSPFQASSLRFWSIVAQDSHKVQLQQRCNTKDFTSRAIEVPLTIQSYSKAIILVVSAGYGLDHTAAIDLVKTVRSGNGFTAMVILKPFSFEGQRRKDEVENLVGKLKEYTSLFIDINTDELLKKDFVTLDEAVKTSNNAVLLAIYAMTLIMSEMQRKLMSEPHNNVKEIKTGEIVRILKTYKEGKVGFGAGYSLRTSILQSIYDCPFLNDGVKMLGGVVICILASSRQLDDGDIDAFLHTFRKITGYSRELILSTSCEQNMEPNLLMTTVLSIGFTKHEKTEERSILSKLAQRLPFIFDLLWRNKVQQNETQGRNAILNSQDELETRMRLHGMSENLDQFDVSRGSQNYVDEHYASSGSEGGEAGLLGKDARNSNFNNFIIKGKPFERVPLSRWNLDPVYQNAQLRAREIAANSEVDPASNFCSFELPVGVRPPAEGEGSDKNSFLISHVDMKSEDNSEVPIDNPGASLGNTLTDSSFEEMRDLNTASKGKYYDLSKKQGILSIRASSMLEAERNSPKKWSPVLEMRFRGGIYRGRCQGGLPEGKGRLVFGDGSIYDGMWRCGKRSGLGTFYFINGDVYQGSWRDDVMHGKGWFYFHTEDRWFANFWKGKAHGEGRFYSKSGEVFFGLFHDGWRHGQFLRIDVDGTRSAEYWNEGVLVSREELDCVK 765
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 21328737 21366766 + Bpe009765.3 Bpe02g01940 100089

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe02g01940 765 PANTHER PROTEIN ACCUMULATION AND REPLICATION OFS PROTEIN 172 762 - -
Bpe02g01940 765 SMART morn 629 650 IPR003409 -
Bpe02g01940 765 SMART morn 652 673 IPR003409 -
Bpe02g01940 765 SMART morn 675 696 IPR003409 -
Bpe02g01940 765 Gene3D Tubulin/FtsZ, GTPase domain 115 373 IPR036525 -
Bpe02g01940 765 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE RELATED 172 762 - -
Bpe02g01940 765 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 628 755 - -
Bpe02g01940 765 Gene3D - 630 703 - -
Bpe02g01940 765 Pfam MORN repeat 677 696 IPR003409 -
Bpe02g01940 765 Pfam MORN repeat 704 720 IPR003409 -
Bpe02g01940 765 Pfam MORN repeat 636 652 IPR003409 -
Bpe02g01940 765 Pfam MORN repeat 654 676 IPR003409 -
Bpe02g01940 765 SUPERFAMILY Tubulin nucleotide-binding domain-like 80 249 IPR036525 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe02g01940 - - - qlo:115981750 794.653
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g01940 Bpe-Chr2:21328737 Bpe02g01622 Bpe-Chr2:19088944 7.21E-10 dispersed
Bpe02g01940 Bpe-Chr2:21328737 Bpe14g00369 Bpe-Chr14:3504533 8.24E-10 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi1g1110 . . Bda01g01766 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Bpe02g01940 . . . . Cmo15g00905 . Cma15g00870 . Car15g00817 . . Bhi12g01003 . . . . . Lcy10g1569 Cla01g00679 Cam01g0711 Cec01g0703 Cco01g0732 Clacu01g0697 Cmu01g0672 Cre09g1833 Lsi09g00736 Csa05g01314 Chy09g00454 Cme09g01260
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0009880 1 1 1 1 1 1 1 1 1 2 1 1 1 1 1 1 1 1 1 1 1 0 1 2 1 2 1 1 1 1 32