Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe02g01948 GTGAACAATATAATGACAGTCGATAACAACACAAACGATGCAGTCGTCTGCTATGCGCCGACGATGATAACCACAAACGGCATTTGGCAAGGCGACAACCCTTTGGATTACTCCCTTCCCCTCTTCGTTTTGCAATTGTCACTCGTCGTCATTCTCACTCGCGTCCTCGTTTTCCTGCTCAAACCCTTCCGCCAACCTCGCGTTGTCTCTGAAATCTTGGGTGGAATAGTTTTGGGTCCTTCAGTTCTCGGACGGAGTACCACATTTGCCGACTCCATGTTTCCTCTGAGAAGTGTAATGGTGCTTGAAACGATGGCAAATGTGGGTCTTCTCTATTTTCTCTTCTTAGTCGGAGTGGAGATGGACCTCTCTGCAATTCGTCGAACTGGCCGGAAAGCCATGGCCATAGGCGCCGCGGGAATGGTTCTTCCCTTCATGATAGGAGGCTGCTTCTCCGTCGTCTTCCGTAAAACAGATTACTCGATGAGCACAGGCACTTTCATTCTCTTCATAGGAGTTTCCTTATCCGTCACTGCATTTCCTGTGCTCGCTAGAGTACTTGCAGAGCTAAAACTCATTAACACCGAGCTCGGAAGGGTTGCAATGGCGTCAGCGCTTTTCAATGACATGTGTGCCTGGATACTTCTGGCCATAGCCATTGCTCTTGCCGAAAATCAAGAGACTTCTTTAGCTTCAATTTGGATCATTTTATCGAGTATTGGCTTTGTTACCTTCGCCATCTTGGCCGTTCGCCCCGCCATTGGGTGGATAATTAGACGGACGCCGGAGGGCGAACCGTTCAGTGACTTTCATATCTGTCTTGTTCTCACCGGCGTAATGATCTCAGGGTTTATTACGGACGCCATCGGAACCCATTCCATTTTTGGAGCTTTTGTGTTTGGTCTTGTTATTCCAAACGGACCACTTGGGATTACTTTGATAGAGAAGCTTGAGGATTTTGTTTCAGGGCTTCTACTTCCTCTCTTCTTCGCCATTAGTGGGCTCAAGACAGATATTGCCGCCATTAAAGGACCTCAAACTTGGGGGATTCTACTTTTTCTCATTTTTTTGGCTGGTGCTGGTAAAGTTGCAGGCACTCTTGTGGCTTCCCTTTGTTATCACATGCCTTGTAACGAAGGAATCTCCCTGGGTCTGCTCATGAACACAAAAGGCCTCATTGAGATGATCATCCTTAATGTCGGAAAAGACTACAAGGTGTTAGACGATAGGTCATTTGCAACAATGGTGATAGTGTCGCTGATAATGACTGCAATAATAACCCCAATAGTGACTGTAATTTACAAGCCAGCAAGGAGGTTTACGCCCTACAAAAAGAGGACGATTCAGAGATCCAAACAGGATTCTGAGCTAAGGGTTTTGGTTTGTGTTCATACTCCCAGAAATGTTCCGACAATCATTAATCTTCTTGAAGCGTCAAACCCAACAAAACGATCACCCATTTGCATCTACGTCCTCCACCTGGTCGAGCTCACCGGACGTGCCTCCGCCATGCTCATCGTTCACAGCACCCACAAGTCGGGCCGCACCTCCCACAACTCCCAGGCGCAGTCGGACCACATCATCAACGCCTTCGAGAACTACGAGCAGCATGCTGGCTGCGTTTCGGTGCAGCCACTCACTGCCATTTCTCCCTACTCCACCATGCACGAAGACATCTGCAGCTTGGCCGAAGACAAGAGAGTCGCGTTCGTTATAATCCCGTTTCACAAGCAGCAGACGGTGGATGGAAGAATGGAAGCAGCTAACCCAGCTTTTCGAACGGTGAACCAGAATTTGTTGGCCAACGCACCTTGCTCCGTGGGGATTTTGGTGGACCGAGGGTTAAGTGGTTCGACTAGATTGGCTCCTACGCAGGTCTCTCACAATGTTGCGGTTCTCTTCTTTGGGGGTCACGACGATAGAGAAGCTCTCTCGTACGCATGGCGGATGTCGGAGCATCCCGGAGTTAGCCTCAATGTGATGCGGTTCGTCCCCGGAAAAGACTCACATTCTGTCTCCAAGCCGAAGGAGATGAAGTCTGATGACCAGAGGCCCCTCCCGGTGGTTACAGGCGTGGAAAGACAAAAGCAACTGGACGACGCGCTGTTGAACGAGTTCAGGATTAAAACAGTGGGCAACAAGTCAGTTGTTTATACAGAAAAAGTGGCGAATAATGGAGAAGAAACAGTGGCATCAGTAAGATCAATGGGCAACAATCATGATCTGTTTATAGTTGGGAGAGGGCAAGGGACGGTGTCGCCGCTCACGGCCGGGCTGACGGATTGGAGCGAGTGCCCGGAGCTGGGGGCCATTGGAGACCTGCTTGCGGCCTCGGATTTTTCATCCACCGCTTCGGTGTTGGTGGTGCAGCAATAC 2376 49.62 VNNIMTVDNNTNDAVVCYAPTMITTNGIWQGDNPLDYSLPLFVLQLSLVVILTRVLVFLLKPFRQPRVVSEILGGIVLGPSVLGRSTTFADSMFPLRSVMVLETMANVGLLYFLFLVGVEMDLSAIRRTGRKAMAIGAAGMVLPFMIGGCFSVVFRKTDYSMSTGTFILFIGVSLSVTAFPVLARVLAELKLINTELGRVAMASALFNDMCAWILLAIAIALAENQETSLASIWIILSSIGFVTFAILAVRPAIGWIIRRTPEGEPFSDFHICLVLTGVMISGFITDAIGTHSIFGAFVFGLVIPNGPLGITLIEKLEDFVSGLLLPLFFAISGLKTDIAAIKGPQTWGILLFLIFLAGAGKVAGTLVASLCYHMPCNEGISLGLLMNTKGLIEMIILNVGKDYKVLDDRSFATMVIVSLIMTAIITPIVTVIYKPARRFTPYKKRTIQRSKQDSELRVLVCVHTPRNVPTIINLLEASNPTKRSPICIYVLHLVELTGRASAMLIVHSTHKSGRTSHNSQAQSDHIINAFENYEQHAGCVSVQPLTAISPYSTMHEDICSLAEDKRVAFVIIPFHKQQTVDGRMEAANPAFRTVNQNLLANAPCSVGILVDRGLSGSTRLAPTQVSHNVAVLFFGGHDDREALSYAWRMSEHPGVSLNVMRFVPGKDSHSVSKPKEMKSDDQRPLPVVTGVERQKQLDDALLNEFRIKTVGNKSVVYTEKVANNGEETVASVRSMGNNHDLFIVGRGQGTVSPLTAGLTDWSECPELGAIGDLLAASDFSSTASVLVVQQY 792
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 21415740 21418313 + Bpe025193 Bpe02g01948 100097

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe02g01948 792 PANTHER CATION/H + ANTIPORTER 11 792 - -
Bpe02g01948 792 Gene3D - 41 440 IPR038770 -
Bpe02g01948 792 Gene3D - 477 760 - -
Bpe02g01948 792 Pfam Sodium/hydrogen exchanger family 49 431 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Bpe02g01948 792 PANTHER CATION/H(+) ANTIPORTER 15 11 792 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe02g01948 - - - pvy:116140351 1214.52
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g01948 Bpe-Chr2:21415740 Bpe11g00238 Bpe-Chr11:1630882 0 dispersed
Bpe02g01948 Bpe-Chr2:21415740 Bpe04g00795 Bpe-Chr4:5190426 0 transposed
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Bpe11g00238 . 11 811 Antiporter Super Family AT2G13620 73.3 0.0e+00 1184.9
Bpe02g01948 . 10 792 Antiporter Super Family AT2G13620 71.7 0.0e+00 1113.2
Bpe05g00671 . 11 139 Antiporter Super Family AT2G13620 56.6 3.2e-36 150.6
Bpe02g00838 . 76 824 Antiporter Super Family AT3G53720 70.1 1.8e-296 1015.0
Bpe04g00795 . 84 765 Antiporter Super Family AT3G53720 50.7 3.3e-189 658.7
Bpe07g00084 . 858 1560 Antiporter Super Family AT3G53720 50.7 1.6e-186 649.8
Bpe07g00084 . 1 778 Antiporter Super Family AT5G41610 69.6 1.5e-301 1031.9
Bpe04g00795 . 7 765 Antiporter Super Family AT5G41610 64.9 3.9e-281 964.1
Bpe11g00238 . 11 797 Antiporter Super Family AT5G41610 50.6 2.2e-215 745.7
Bpe02g00838 . 1 801 Antiporter Super Family AT5G41610 51.7 5.0e-212 734.6
Bpe05g00671 . 1 140 Antiporter Super Family AT5G41610 68.1 5.1e-47 186.4
Bpe07g00084 . 1 803 Antiporter Super Family AT4G23700 66.1 1.3e-295 1012.3
Bpe04g00795 . 7 764 Antiporter Super Family AT4G23700 62.2 1.4e-270 929.1
Bpe05g00671 . 1 140 Antiporter Super Family AT4G23700 73.6 3.5e-51 200.3
Bpe04g00795 . 4 779 Antiporter Super Family AT3G17630 71.8 0.0e+00 1079.7
Bpe07g00084 . 780 1555 Antiporter Super Family AT3G17630 63.4 3.1e-270 927.9
Bpe11g00238 . 8 793 Antiporter Super Family AT3G17630 50.8 2.0e-221 765.8
Bpe02g00838 . 8 803 Antiporter Super Family AT3G17630 51.5 4.4e-208 721.5
Bpe05g00671 . 9 140 Antiporter Super Family AT3G17630 68.9 2.3e-44 177.6
Bpe07g00084 . 776 1556 Antiporter Super Family AT1G64170 55.3 2.7e-229 792.0
Bpe04g00795 . 6 764 Antiporter Super Family AT1G64170 55.5 5.0e-228 787.7
Bpe05g00671 . 12 140 Antiporter Super Family AT1G64170 72.1 1.1e-44 178.7
Bpe11g00238 . 11 811 Antiporter Super Family AT2G13620 73.3 0.0e+00 1184.9
Bpe02g01948 . 10 792 Antiporter Super Family AT2G13620 71.7 0.0e+00 1113.2
Bpe05g00671 . 11 139 Antiporter Super Family AT2G13620 56.6 3.2e-36 150.6
Bpe07g00084 . 776 1556 Antiporter Super Family AT1G64170 55.3 2.7e-229 792.0
Bpe04g00795 . 6 764 Antiporter Super Family AT1G64170 55.5 5.0e-228 787.7
Bpe05g00671 . 12 140 Antiporter Super Family AT1G64170 72.1 1.1e-44 178.7
Bpe07g00084 . 1 803 Antiporter Super Family AT4G23700 66.1 1.3e-295 1012.3
Bpe04g00795 . 7 764 Antiporter Super Family AT4G23700 62.2 1.4e-270 929.1
Bpe05g00671 . 1 140 Antiporter Super Family AT4G23700 73.6 3.5e-51 200.3
Bpe07g00084 . 1 778 Antiporter Super Family AT5G41610 69.6 1.5e-301 1031.9
Bpe04g00795 . 7 765 Antiporter Super Family AT5G41610 64.9 3.9e-281 964.1
Bpe11g00238 . 11 797 Antiporter Super Family AT5G41610 50.6 2.2e-215 745.7
Bpe02g00838 . 1 801 Antiporter Super Family AT5G41610 51.7 5.0e-212 734.6
Bpe05g00671 . 1 140 Antiporter Super Family AT5G41610 68.1 5.1e-47 186.4
Bpe04g00795 . 4 779 Antiporter Super Family AT3G17630 71.8 0.0e+00 1079.7
Bpe07g00084 . 780 1555 Antiporter Super Family AT3G17630 63.4 3.1e-270 927.9
Bpe11g00238 . 8 793 Antiporter Super Family AT3G17630 50.8 2.0e-221 765.8
Bpe02g00838 . 8 803 Antiporter Super Family AT3G17630 51.5 4.4e-208 721.5
Bpe05g00671 . 9 140 Antiporter Super Family AT3G17630 68.9 2.3e-44 177.6
Bpe02g00838 . 76 824 Antiporter Super Family AT3G53720 70.1 1.8e-296 1015.0
Bpe04g00795 . 84 765 Antiporter Super Family AT3G53720 50.7 3.3e-189 658.7
Bpe07g00084 . 858 1560 Antiporter Super Family AT3G53720 50.7 1.6e-186 649.8
Bpe10g00541 . 24 804 Antiporter Super Family AT3G52080 52.9 2.7e-234 808.5
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0005878 2 1 2 1 2 1 2 1 0 1 1 0 2 1 1 2 0 3 2 2 1 1 1 1 1 1 1 2 1 2 39