Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe02g01962 TTTTTTGTCGATGAGCTTCCTCTTTTGCCCAAGCTTTATGGCTTTCGCGTGGACTATGATCAGCGCCGTCGTCTTCTCCGACCTAACTCTCTCGTCATCGGCATGTTTCGTAAAACATGGAAATTTCACAGAGACCTTCCCCCAACGCCAGTTTTCGCCTACGGTGTCTCCGAGGAAAAGGCAACAGTACCTGGTCCCACCATCGAGGCACGCCATGGCGTTCCAACCTACGTCACCTGGGAAAATCACCTCCCCTCGAAGCACATTCTCCCGTGGGACCCTACAATCCCGACCGCCGTCCCCGCCAGCCGGCGTGGAGTCCCGACTGTAGTTCACCTCCACGGCGGTATCACGGAGCCATCAAGTGACGGACATTCCGGTGCCTGGTTCACCGCCGGATTCGAGGATAAGGGCCCCACCTGGACTCATCAAACATATCGCTACCACAACCAACAACACCCCGGAACTCTATGGTACCACGACCATGCCATGGGTTTGACTCGAGTCAACCTTCTAGCCGGTCTCGTCGGCTCCTACATTATTCGACATCCCGAGGTTGAAGCCCCACTACGACTGCCCGCAGGCGAGTTTGATAGAACGCTTGTCGTTTTTGATCGTAGTTTCCGCTCTGACGGCTCCATATACATAAATTCCACCGGAAACAACCCCTCTATACACCCCCAGTGGCAGCCTGAATACTTCGGCGACGCCATCATCGTCAACGGCAAAGTTTGGCCCAAGATGATCGCGCGACGCCGTAAGTACAGGTTCCGAATCATCAATGCAAGCAATGCTAGATTCTTCAGATTCTTCTTCACCAACGGCCTTAGATTTACGTACGTCGCTTCAGACTCCAGCTACCTTGATAAGCCAGTCACGACCAGCGCCGTCTTCCTCGCACCCTCCGAGATTGCAAACGTGGTGGTTGACTTTTCAGAGTCAAAGAACGATCATGTAATCTTGGCCAACGACGCGCCGTACCCCTATCCCTCTGGCGACCCAGTAAACGAATTCAACGGAATGGTGATGAAGGTTTTCATCAACAGACGATCAGAATCAGAAAAATGGCGGATCCCGGCTACGCTGATTAAATACCCATCTCTCGATCTAGCGTCTGCCGCTCGCACGCGGTACATAGCACTGTATGAGTACACGAGTGAGACCGACGAGCCAACTCATCTATACATAAACGGGGCGCCATTTGAGGCACCGGCGACGGAGAAACCGAGGGTGGGTACGACGGAGATATGGAATGTGATAAACCTGACGGAGGACAATCATCCTCTGCACATCCACTTAGGGCTGGTGAAGGCGGTGGAGCAGCGGGATCTGGTAAAGGCGGAAGAGTTCAAACAATGCATGATGAAGAAGAATGACGCAGACAAATGCAAAATAAAAAAGCACGTCAGGAGGAGAAGCGTGGCAGTGGAGGCGCAGGAGAAGGGGTGGAAGAACGTCTACAAGATGATGCCTGGATATGTGACCAAGTTGGCCGTCCGATTTGCTCCAATAGATTCCGACAACGCCTCCTATCCCTTCGACGCGACAGCAGAGCCTGGCTACGCCTACCATTGCCATATTCTGGATCACGAAGACAATGTGATGATGCGGCCATTGAAGCTCCTCGAG 1629 53.1 FFVDELPLLPKLYGFRVDYDQRRRLLRPNSLVIGMFRKTWKFHRDLPPTPVFAYGVSEEKATVPGPTIEARHGVPTYVTWENHLPSKHILPWDPTIPTAVPASRRGVPTVVHLHGGITEPSSDGHSGAWFTAGFEDKGPTWTHQTYRYHNQQHPGTLWYHDHAMGLTRVNLLAGLVGSYIIRHPEVEAPLRLPAGEFDRTLVVFDRSFRSDGSIYINSTGNNPSIHPQWQPEYFGDAIIVNGKVWPKMIARRRKYRFRIINASNARFFRFFFTNGLRFTYVASDSSYLDKPVTTSAVFLAPSEIANVVVDFSESKNDHVILANDAPYPYPSGDPVNEFNGMVMKVFINRRSESEKWRIPATLIKYPSLDLASAARTRYIALYEYTSETDEPTHLYINGAPFEAPATEKPRVGTTEIWNVINLTEDNHPLHIHLGLVKAVEQRDLVKAEEFKQCMMKKNDADKCKIKKHVRRRSVAVEAQEKGWKNVYKMMPGYVTKLAVRFAPIDSDNASYPFDATAEPGYAYHCHILDHEDNVMMRPLKLLE 543
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 21502417 21504440 - Bpe025195 Bpe02g01962 100111

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe02g01962 543 CDD CuRO_2_CotA_like 197 344 - -
Bpe02g01962 543 Pfam Multicopper oxidase 382 539 IPR011706 GO:0005507|GO:0016491
Bpe02g01962 543 PANTHER MULTI-COPPER OXIDASE 3 534 IPR045087 -
Bpe02g01962 543 Gene3D - 364 543 IPR008972 -
Bpe02g01962 543 SUPERFAMILY Cupredoxins 366 539 IPR008972 -
Bpe02g01962 543 Gene3D - 185 363 IPR008972 -
Bpe02g01962 543 SUPERFAMILY Cupredoxins 189 312 IPR008972 -
Bpe02g01962 543 CDD CuRO_1_BOD_CotA_like 28 185 - -
Bpe02g01962 543 Gene3D - 1 181 IPR008972 -
Bpe02g01962 543 Pfam Multicopper oxidase 108 184 IPR011707 GO:0005507
Bpe02g01962 543 Pfam Multicopper oxidase 241 323 IPR001117 -
Bpe02g01962 543 SUPERFAMILY Cupredoxins 34 185 IPR008972 -
Bpe02g01962 543 CDD CuRO_3_CotA_like 374 541 - -
Bpe02g01962 543 PANTHER MULTICOPPER OXIDASE LPR1 HOMOLOG 1 3 534 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe02g01962 - - - mcha:111015632 830.091
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g01962 Bpe-Chr2:21502417 Bpe02g01984 Bpe-Chr2:21646709 0 dispersed
Bpe02g01962 Bpe-Chr2:21502417 Bpe15g00426 Bpe-Chr15:15780045 5.41E-07 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi1g1005 Blo01g00465 . Bda01g01785 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Cone9ag0515 . . . . . . . . . Bpe02g01962 Bma01g00137 . . . Cmo15g00882 . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0006017 2 1 2 2 2 1 1 1 1 1 1 1 1 1 1 1 1 2 1 1 1 0 1 3 3 1 1 1 1 1 38