Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe02g01964 ATGAATAGCCTCGAAGGAGAAATTCCGGAGACTTTGGCAGGTTCTCGAATTCAGACCTTGTGGTTGAATGGGCAACAGGGCAACACAAAGTTAAACGGCTCCATCTCTGTGCTGCAAAATATGACTTATTTAGGCGAGGTTTGGCTGCACGGAAATCAATTCTCCGGTCCTTTACCTGACTTTTCTAACTTGCAGGGGCTGCAGAATTTGAGTTTAAGAGACAACCAACTGACGGGTATTGTTCCGCCATCTCTGGTGAATTGTAACTCCCTTCTGATAGTAAATTTGACGAATAATTTACTTCAAGGGCCGACTCCAAAGTTCGATTCTGAAGTTCATGTCGATATGAGCCCAGGGTCGAACAGTTTCTGCACGGATACGCCAGGCGAGCCTTGCGACGCTCGTGTTTATGCTCTGCTATCGGTCGCCCAAGAACTGGGCTACCCATCAATTTTTGCAAAAGTATGGAAGCTAAACGACCCTTGTAAGAGCTGGACTGGTATTACATGCGATGGGACTGGAAACATCACCATTATCAATTTCACTGGCAGGAACCTAAATGGTACAATTTCTCCAAGCTTTGCTTTGCTTACGTCTGTCAAAAGTTTGTTTCTCTCAAACAATTCTTTAACTGGTGTTATACCGCCTGAGCTTACTACCATGCCTAATCTTGTTGAATTAGATGTTTCTAATAACAACCTTTTTGGCAAAGTGCCATCTTTTTTGAAGACTGTGGTTGTGAGGACTGATGGTAATCCAGATATTGGTAAGGACATAAGTAGTGTATCTTCGACTGGGGAAGGTAGAAAATCTAGGACTAGATTGATTGTTGGGTCTTTTGTTGGAAGTATTGGCGGATTGCTTTTAGTATGGGTTGTAGCTTTCTTTTTGTATAGTAAAAGACAAACGCATAGAGGTAGAAGACAAGTTTTGAATACAGCGGTGGTTTCTGGCGGAGGAAAGGTGTTCGATAGTCCTTCGAGCGTTCTGCCTGGGCCGAGCAACATTCACATTGTTGAGGCTGGAAGTATGTCTATGTCTTTTCAGGTTTTGAGGAGTGTGACGAATAATTTCGGTGAAGAAAATGTGTTGGGGAGAGGGGGTTTTGGGTCTGTTTACAAGGGTGATTTGCACGGCACCCAAATTGCAGTCAAGAGGATGGAGCATGGAGGGGTGACCGAGAAGGGTCTTAACGAGTTTAAGGCTGAGATTATGGTTTTAACGAGTGTTCGACATAGAAATTTAGTGGGACTTCTCGGATATTGCTTGGATGGACATGAGAGGCTTCTTGTTTATGAATATATGCCTCAAGGACCTCTTAGTAGACATCTTTTTGACTGGAAAGATGAAGGGATAGAGCCCCTTGAGTGGAAGAGAAGGCTTGCTATCGCATTGGACGTGGCCCGAGGTGTCGAATACTTGCACAGTTTGGCCAATCAATGTTTTATTCATCGCGATCTTAAACCATCCAACATTCTTCTCGGAGACGATATGCGTGCCAAAGTAGCGGACTTTGGGCTGGTAAAGCTTGCTCCGGAAGGAATATCATCTGTCGAAACAAGACTTGCTGGCACATTCGGCTATCTTGCTCCTGAATATGCAGTGACTGGACGGGTAACGACCAAGATTGATGTGTATAGCTTTGGAGTGATTTTAATGGAGATGATCACAGGCAGGAAAGCGCTGGACGAAAGCCAACCCCAAGGTAGCTTGCATTTAGTGTCATGGTTCCAAAGAATGTCGGCCGAGGGAGGCTTAAACAAAACAATAGACCCGACAATTGGCATAAATGAGGAGACCCTTTGTAGCATTGGTAGAGTAGCTGAGTTGGCTAGCCACTGCTGCACAAGGGAGCCGCACCATCGGCCCGACATGGGCCATATCGTCAGCGTCCTTGCGTCACTGGTGGAAGTGTGGAAGCCAGTAGAGCCTCGTCCTGAACAGGTGACCGGGATTAACTTCAATACGTCGTTAAAAGAGGCCGTTGAGAGGTGGCAGGCCCTCGGAGGAAGTACCAACTTGGACGAACATGCTTTTTCTTCTTCAACGCCATTTCTTTGTGAGGGGAGAAGGTAA 2076 45.71 MNSLEGEIPETLAGSRIQTLWLNGQQGNTKLNGSISVLQNMTYLGEVWLHGNQFSGPLPDFSNLQGLQNLSLRDNQLTGIVPPSLVNCNSLLIVNLTNNLLQGPTPKFDSEVHVDMSPGSNSFCTDTPGEPCDARVYALLSVAQELGYPSIFAKVWKLNDPCKSWTGITCDGTGNITIINFTGRNLNGTISPSFALLTSVKSLFLSNNSLTGVIPPELTTMPNLVELDVSNNNLFGKVPSFLKTVVVRTDGNPDIGKDISSVSSTGEGRKSRTRLIVGSFVGSIGGLLLVWVVAFFLYSKRQTHRGRRQVLNTAVVSGGGKVFDSPSSVLPGPSNIHIVEAGSMSMSFQVLRSVTNNFGEENVLGRGGFGSVYKGDLHGTQIAVKRMEHGGVTEKGLNEFKAEIMVLTSVRHRNLVGLLGYCLDGHERLLVYEYMPQGPLSRHLFDWKDEGIEPLEWKRRLAIALDVARGVEYLHSLANQCFIHRDLKPSNILLGDDMRAKVADFGLVKLAPEGISSVETRLAGTFGYLAPEYAVTGRVTTKIDVYSFGVILMEMITGRKALDESQPQGSLHLVSWFQRMSAEGGLNKTIDPTIGINEETLCSIGRVAELASHCCTREPHHRPDMGHIVSVLASLVEVWKPVEPRPEQVTGINFNTSLKEAVERWQALGGSTNLDEHAFSSSTPFLCEGRR 691
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 21512273 21514694 + Bpe009787.1 Bpe02g01964 100113

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe02g01964 691 ProSiteProfiles Protein kinase domain profile. 358 635 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe02g01964 691 Pfam Leucine rich repeat N-terminal domain 136 171 IPR013210 -
Bpe02g01964 691 SUPERFAMILY Protein kinase-like (PK-like) 336 632 IPR011009 -
Bpe02g01964 691 SMART serkin_6 358 636 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe02g01964 691 Gene3D Ribonuclease Inhibitor 134 259 IPR032675 -
Bpe02g01964 691 Gene3D Transferase(Phosphotransferase) domain 1 435 644 - -
Bpe02g01964 691 PANTHER OSJNBA0070M12.3 PROTEIN 2 675 - -
Bpe02g01964 691 SUPERFAMILY L domain-like 2 241 - -
Bpe02g01964 691 Gene3D Phosphorylase Kinase; domain 1 331 434 - -
Bpe02g01964 691 CDD STKc_IRAK 364 632 - -
Bpe02g01964 691 Pfam Protein tyrosine and serine/threonine kinase 362 632 IPR001245 GO:0004672|GO:0006468
Bpe02g01964 691 ProSitePatterns Protein kinases ATP-binding region signature. 364 385 IPR017441 GO:0005524
Bpe02g01964 691 Gene3D Ribonuclease Inhibitor 1 131 IPR032675 -
Bpe02g01964 691 Pfam Leucine Rich repeats (2 copies) 198 238 IPR025875 -
Bpe02g01964 691 ProSitePatterns Serine/Threonine protein kinases active-site signature. 482 494 IPR008271 GO:0004672|GO:0006468
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe02g01964 - - - csv:101210025 897.886
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Bpe02g01964 Bpe13g00997 CCT
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g01964 Bpe-Chr2:21512273 Bpe14g00067 Bpe-Chr14:1077870 0 dispersed
Bpe13g00997 Bpe-Chr13:15717302 Bpe02g01964 Bpe-Chr2:21512273 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi1g532 . . Bda01g01787 Bda11g00197 Bpe13g00997 . . . . Cmo18g00627 . . . . . . Cpe01g01857 . . . . . . . . . . . . . . . . . . . Csa05g01967 . . . . . Bda11g00197 . Bpe02g01964 Bma01g00495 Bma06g01141 . Cmo04g02234 Cmo15g00927 Cma04g02141 Cma15g00889 Car04g02076 Car15g00835 Cpe13g00428 . Bhi12g00963 . . . . . Lcy10g1596 Cla01g00653 . . . . . . Lsi09g00707 . Chy09g00467 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0001831 2 2 1 2 3 1 4 1 1 2 2 1 4 2 1 4 1 1 4 1 2 2 2 2 2 2 2 3 2 1 60
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63203 PF07714 PK_Tyr_Ser-Thr 1.70E-44 CL0016 Bpe PK