Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe02g02000 ATGAAGAGGGAACACTTCCAGTTAAATCCTCAACCTGGCCCATCTTCGATTGCCGGAAAATCCAAGCTTTGGGAAGATGGCTCGCAACGAGACGGAGGTGTGGATGAGCTTCTGAACGTTTTGGGGTACGAAGTTAGGTCGTCGGACATGGTCGACGTTGCCCAAAAGCTTGAAAAGCTTGAAGAGTTTATGGGTAATGTTCAGGAAGATGGACTCTCTTATCTTGCATCCGAAACTGCCCATTATAATCCTTCCGATCTATCCACCTGGCTGGAAAGCATAATTTACGAGTTTAACCCATCTCCAACATTCGATTCCGTCGTCGGGCCACCGGCTAAGACACCGCGGGACGGTTCGTTTCTACCTCCTGCTGGTTCCTCCACCGTAACCTCGATTGATGTCGCAGAACAAAGAAACCAGAGGTTTTTCGAAAATTCAGATTATGATCTGAAAGTGAAAGCTATACCTGGTAAGGCTATTTGTAACCGAAATACCCAATTTCAAGAAACGTGGTCTAGAGAGAAGAAACGACTAAAACCCTCCTCTGAGCTGGAATCCGAATCGGAATCCGAACAATTTTCAGAGTCATTAACTCGGCCTGTAGTCCTAGTTGACTCGCAAGAAAACGGAATTCAACTCGTTCACACTCTAATGGCCTGCGCCGAAGCAGTTCACCAAAACAGCCTAAATCTGGCCGAGTCTCTCCTCAAACGAGTCGGCTATCTCGCAGTCTCTCAAACCGGAGCTATGCGGAAAGTCGCCACCTATTTTGCCGAAGCTCTAGCTCGCAGGATTTACAGTCTCTACCCTCGGAACGCTCTCGACCATTCTTTTCCCGATTCGCTTCAATCTCATTTCTACGAGAGTTGTCCTTACCTTAAATTTGCTCATTTCACAGCAAATCAAGCGATTCTCGACGCTTTTGAAGGTAAAAAACGAGTTCACGTTGTTGATTTTTCTATGAATCAAGGTATGCAATGGCCGGCGCTTCTTCAAGTTCTGGCTCTGCGACCGGGTGGTCCACCGGCTTTCCGGCTAACCGGAATCGGGCCTCCGGCACGGGATAACTCCGATTATCTCCAAGAAGTCGGCTGGAAGCTTGCCCAATTAGCTGAAATGATTCAAGTTAAGTTTGAATACCGTGGGTTTGTCGCCAATAGCTTGGCGGATCTTGATTTGTCGATGCTCGAACTCAGGCCGAGTGAAGACGAATCAGTGGCGGTCAACTCGGTTTTTGAGTTTCATAAGCTCTTGGCTCGACCGGGAGCGATCGGAAAGGTGTTGTCAGTTGTGAAGCAGATGAAGCCTTGCATCGTGACGGTAGTGGAGCAAGAAGCTAGCCACAACGGACCGAGTTTTCTCGACCGGTTCACTGAGTCACTCCATTACTATTCCACTCTGTTTGACTCGTTGGAAGGTTCAGTCACTGCCAACAATCAGGACAAGGCCATGACAGAGATGTACTTGGGGAAGCAAATCTGCAACGTGATGGCATGTGAAGGCGCAGACAGGGTAGAGCGGCATGAGAATCTGACCCAATGGCGGACTCGGTTCCACTCAGCTGGGTTTGACTCGGCTCCCTTAGGGTCTAATTCGTTCAAACAGGCCACCATTTTGCTCACTCTGTTTGGAAGCGGAGATGGGTATGGCGTAGAGGAGAGAAATGGGTGTCTTATGCTGGGCTGGCACAGCAGACCCCTCATCACCACCTCCGCATGGAGGGTGGCGCAGAGAGGAATATTAAATCAGTGA 1752 49.14 MKREHFQLNPQPGPSSIAGKSKLWEDGSQRDGGVDELLNVLGYEVRSSDMVDVAQKLEKLEEFMGNVQEDGLSYLASETAHYNPSDLSTWLESIIYEFNPSPTFDSVVGPPAKTPRDGSFLPPAGSSTVTSIDVAEQRNQRFFENSDYDLKVKAIPGKAICNRNTQFQETWSREKKRLKPSSELESESESEQFSESLTRPVVLVDSQENGIQLVHTLMACAEAVHQNSLNLAESLLKRVGYLAVSQTGAMRKVATYFAEALARRIYSLYPRNALDHSFPDSLQSHFYESCPYLKFAHFTANQAILDAFEGKKRVHVVDFSMNQGMQWPALLQVLALRPGGPPAFRLTGIGPPARDNSDYLQEVGWKLAQLAEMIQVKFEYRGFVANSLADLDLSMLELRPSEDESVAVNSVFEFHKLLARPGAIGKVLSVVKQMKPCIVTVVEQEASHNGPSFLDRFTESLHYYSTLFDSLEGSVTANNQDKAMTEMYLGKQICNVMACEGADRVERHENLTQWRTRFHSAGFDSAPLGSNSFKQATILLTLFGSGDGYGVEERNGCLMLGWHSRPLITTSAWRVAQRGILNQ 583
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 21717752 21719503 - Bpe009823.1 Bpe02g02000 100149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe02g02000 583 Gene3D - 33 98 IPR038088 -
Bpe02g02000 583 SMART DELLA_2 35 108 - -
Bpe02g02000 583 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 13 575 IPR005202 -
Bpe02g02000 583 PANTHER DELLA PROTEIN GAI1-RELATED 13 575 IPR030006 GO:0003712|GO:0005634
Bpe02g02000 583 ProSiteProfiles GRAS family profile. 204 574 IPR005202 -
Bpe02g02000 583 MobiDBLite consensus disorder prediction 171 192 - -
Bpe02g02000 583 Pfam GRAS domain family 213 574 IPR005202 -
Bpe02g02000 583 MobiDBLite consensus disorder prediction 1 29 - -
Bpe02g02000 583 MobiDBLite consensus disorder prediction 171 186 - -
Bpe02g02000 583 Pfam Transcriptional regulator DELLA protein N terminal 35 102 IPR021914 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g02000 Bpe-Chr2:21717752 Bpe14g00078 Bpe-Chr14:1265882 0 dispersed
Bpe02g00947 Bpe-Chr2:8525031 Bpe02g02000 Bpe-Chr2:21717752 5.75E-72 transposed
Bpe03g00717 Bpe-Chr3:27303309 Bpe02g02000 Bpe-Chr2:21717752 1.85E-62 transposed
Bpe04g00384 Bpe-Chr4:2423087 Bpe02g02000 Bpe-Chr2:21717752 5.80E-50 transposed
Bpe06g00551 Bpe-Chr6:16542550 Bpe02g02000 Bpe-Chr2:21717752 4.19E-59 transposed
Bpe15g00970 Bpe-Chr15:19311839 Bpe02g02000 Bpe-Chr2:21717752 1.30E-70 transposed
Bpe13g01052 Bpe-Chr13:16168816 Bpe02g02000 Bpe-Chr2:21717752 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21019 PF03514 GRAS 2.00E-132 CL0063 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe02g02000 K14494 - csv:101204164 792.727