Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe02g02039 ATGGCTACCATATCAAGGGAAGATCACTCCGACGACTATGATAGTAGCTGCTCCTCCATCACCGTCCCGGACTCTAGCCGGAGCTGGATGAGCAACCTTAGCTTTGGTAGCAGACGGCTCAGCTCGGCCTCCTGCGAAGTTTCTCCTCACAAGCCCCACAAGGCTAACCATGCCGCATGGGAGTCCATGAGATGGCTGAGAGGGGCTGCGGGATGCGTCGGGCTCGACCATTTTCGGCTGCTTCGCCGGCTCGGAAGTGGCGATATAGGAAATGTGTATCTTTGTCAGATAAGAAATCCATTGGTGGGTTTGCCTCAGAGCTTTTATGCCATGAAAGTGGTGGATAGAGAAGCTCTGGCTATAAGGAAGAAATTGAAAAGAGCAGAAATGGAGAAGGAGATTCTTGGTTTGCTTGATCATCCTTTTCTGCCAACTCTTTACGCCGCTTTTGAGGCTTCTCACTACTCTTGTTTGGTCATGGAGTTTTGTCCCGGCGGTGACTTGTACGCCGCCCGGCAACGGCAGTCAGGAAGACGGTTTAGCATTTCTTCTGCTAAGTTTTACGCAGCAGAAGTGATCTTAGCGATAGAATATCTGCACATGATGGGAATTGTTTACAGAGATTTAAAGCCTGAAAATGTACTAATCAGAGAAGACGGCCACATAATGTTGTCCGATTTCGATCTCTGTCTCAAATGCGATGTCGTTCCGAGACTCGTCCGGCCAAGAAGAACAGCCAGTGAAGTCCGGTCCGCCGGTAAAGGCTCCGACAGAAGTTCTTCTGCTTCTTGCGTGGGTCCGTTAAAGCCAGTCTTGTCTTGCTTCTCAAAACGAACCAAACCAACAAAAACAACCACCATCATAGAGCAGGCTGATCATCTTCTTCCAGAGCCCGAACCAGAGTTAGTAGCGGAGCCAAGTGGGGCCCGCTCGAAATCTTTCGTCGGCACCCACGAATACCTAGCCCCGGAGATCATCTCCGGCGAGGGCCACGGAAGTGCGGTCGATTGGTGGACATTAGGAGTGTTTTTATACGAAATGCTGTACGGAAAAACTCCGTTTAAAGGTGAAAACAACGAGAAAACCCTAGTAAACATTCTGAAGAAGCCATTAACGTTTCCAAGAATAGGAGTAAGTAGCAGCAAAGAGTACGAAGAAATGGTGAAAGTTCAAGATTTGATAATAAAACTGCTGGCGAAGAATCAGAAGAAGAGAATCGGAAGCGTAAAGGGTTCGGCAGAAATCAAGAGGCACGAATTTTTCAAAGGAGTCAACTGGGCTTTGATTCGTTCCGTAAAACCACCTGAAATTCCTCGAGATTTGCAGAATATCAGACGGAGAAGCTACGTTCCAAAGCTGACCAAGAAGGAGAGAGCCGAACCTTACCAAATTCCTCACCACCATGTTGATTACTTCTAA 1419 48.06 MATISREDHSDDYDSSCSSITVPDSSRSWMSNLSFGSRRLSSASCEVSPHKPHKANHAAWESMRWLRGAAGCVGLDHFRLLRRLGSGDIGNVYLCQIRNPLVGLPQSFYAMKVVDREALAIRKKLKRAEMEKEILGLLDHPFLPTLYAAFEASHYSCLVMEFCPGGDLYAARQRQSGRRFSISSAKFYAAEVILAIEYLHMMGIVYRDLKPENVLIREDGHIMLSDFDLCLKCDVVPRLVRPRRTASEVRSAGKGSDRSSSASCVGPLKPVLSCFSKRTKPTKTTTIIEQADHLLPEPEPELVAEPSGARSKSFVGTHEYLAPEIISGEGHGSAVDWWTLGVFLYEMLYGKTPFKGENNEKTLVNILKKPLTFPRIGVSSSKEYEEMVKVQDLIIKLLAKNQKKRIGSVKGSAEIKRHEFFKGVNWALIRSVKPPEIPRDLQNIRRRSYVPKLTKKERAEPYQIPHHHVDYF 472
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 21985788 21987400 - Bpe009860.1 Bpe02g02039 100188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe02g02039 472 Coils Coil 111 131 - -
Bpe02g02039 472 ProSitePatterns Serine/Threonine protein kinases active-site signature. 204 216 IPR008271 GO:0004672|GO:0006468
Bpe02g02039 472 ProSiteProfiles Protein kinase domain profile. 78 421 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe02g02039 472 CDD STKc_phototropin_like 76 439 - -
Bpe02g02039 472 Pfam Protein kinase domain 79 232 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe02g02039 472 Pfam Protein kinase domain 310 421 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe02g02039 472 Gene3D Transferase(Phosphotransferase) domain 1 310 439 - -
Bpe02g02039 472 Gene3D Phosphorylase Kinase; domain 1 75 166 - -
Bpe02g02039 472 PANTHER PROTEIN KINASE PINOID 2 1 472 - -
Bpe02g02039 472 PANTHER FLIPPASE KINASE 1-RELATED 1 472 - -
Bpe02g02039 472 SUPERFAMILY Protein kinase-like (PK-like) 58 443 IPR011009 -
Bpe02g02039 472 Gene3D Transferase(Phosphotransferase) domain 1 167 233 - -
Bpe02g02039 472 SMART serkin_6 78 421 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g02039 Bpe-Chr2:21985788 Bpe11g01016 Bpe-Chr11:7560216 1.25E-148 dispersed
Bpe11g01078 Bpe-Chr11:8096133 Bpe02g02039 Bpe-Chr2:21985788 2.60E-131 dispersed
Bpe02g02039 Bpe-Chr2:21985788 Bpe02g01037 Bpe-Chr2:11063600 4.47E-149 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63205 PF00069 Pkinase 2.50E-32 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe02g02039 K08286 - qsu:112027986 716.457