Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe02g02063 | ATGGCCGTCGATCTAGCGGTTTTCCCCCAGATGGAGGATCAAGCGGCGGTGCAAGAAGCAGCGGCCTTAGGATTGAAGAGCATGGAAGAGCTAATCTGTATCTTATCGCATCAAATCAATCAGAGCCGCGTCGATCTCGGCCACCTCAATTGCTCTGAAATCACCGATTTCACCGTTTCTAAATTCAAGCAAGTCATTTCCATCCTTAACCGAACCGGCCACGCTCGCTTCCGCCGCGGACCGACGCTTCAACACCATTCCCCTCCCGGCATGGTTCATCCCACAGCTCAACCGGAGAAAGAGCTTCAGACCGATTTTTCATCTGTTTCGCCTCCGATCTCCTCAACGACGTCGTCATTTCCGTCATCTTTCGCCGGAGACGGCAGCGTTTCAAACTGGAAACGAGGATCTTGCGCGGCTTTACCTCAGGCTCCGGCGCAATCCGCCGGGAAACCGCCGCTGTCGTTGGGCAGTCGGAAACGGTGCCAGGATCACGTCGTCTCCTGTGACGCTCCCGGGAACATTTCATCCTCCTGCCGGTGCCATTGCGCTAAAAAAAGGAAATCGAAGGTTAAAAGGACCATCAGGGTTCCGGCGATCAGCTCTAGAATCGCCGATATACCGCCAGATGAGTATTCCTGGAGAAAATACGGGCAAAAGCCGATAAAAGGGTCGCCGTATCCACGAGGGTATTACAAGTGTAGTAGCGTGAGAGGTTGTCCAGCTAAGAAACACGTAGAGCGAGCCACAGACGATCCGACCATGCTCGTAGTAACTTACGAAGCCGGGCATCGTCACCCGCAGGCTCAACTGGGGGAGCCGGCGACAAAAGAGCGTTGA | 840 | 54.4 | MAVDLAVFPQMEDQAAVQEAAALGLKSMEELICILSHQINQSRVDLGHLNCSEITDFTVSKFKQVISILNRTGHARFRRGPTLQHHSPPGMVHPTAQPEKELQTDFSSVSPPISSTTSSFPSSFAGDGSVSNWKRGSCAALPQAPAQSAGKPPLSLGSRKRCQDHVVSCDAPGNISSSCRCHCAKKRKSKVKRTIRVPAISSRIADIPPDEYSWRKYGQKPIKGSPYPRGYYKCSSVRGCPAKKHVERATDDPTMLVVTYEAGHRHPQAQLGEPATKER | 279 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 22147628 | 22148663 | - | Bpe009884.1 | Bpe02g02063 | 100212 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe02g02063 | 279 | PANTHER | TRANSCRIPTION FACTOR WRKY FAMILY-RELATED | 105 | 268 | - | - | |
Bpe02g02063 | 279 | Pfam | Plant zinc cluster domain | 159 | 206 | IPR018872 | - | |
Bpe02g02063 | 279 | PANTHER | WRKY TRANSCRIPTION FACTOR 21-RELATED | 105 | 268 | IPR044810 | GO:0003700 | |
Bpe02g02063 | 279 | SUPERFAMILY | WRKY DNA-binding domain | 206 | 268 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Bpe02g02063 | 279 | SMART | WRKY_cls | 208 | 268 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Bpe02g02063 | 279 | Pfam | WRKY DNA -binding domain | 210 | 266 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Bpe02g02063 | 279 | MobiDBLite | consensus disorder prediction | 77 | 124 | - | - | |
Bpe02g02063 | 279 | PANTHER | TRANSCRIPTION FACTOR WRKY FAMILY-RELATED | 7 | 106 | - | - | |
Bpe02g02063 | 279 | PANTHER | WRKY TRANSCRIPTION FACTOR 21-RELATED | 7 | 106 | IPR044810 | GO:0003700 | |
Bpe02g02063 | 279 | Gene3D | WRKY domain | 194 | 269 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Bpe02g02063 | 279 | ProSiteProfiles | WRKY domain profile. | 203 | 269 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Bpe02g02063 | 279 | MobiDBLite | consensus disorder prediction | 100 | 124 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe02g02063 | Bpe-Chr2:22147628 | Bpe04g00024 | Bpe-Chr4:230847 | 1.25E-85 | dispersed | |
Bpe13g01093 | Bpe-Chr13:16465233 | Bpe02g02063 | Bpe-Chr2:22147628 | 8.37E-113 | wgd | |
Bpe02g00606 | Bpe-Chr2:3946555 | Bpe02g02063 | Bpe-Chr2:22147628 | 3.71E-94 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
21026 | PF03106 | WRKY | 8.90E-25 | CL0274 | Bpe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe02g02063 | - | - | csin:114311210 | 322.398 |