Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe02g02063 ATGGCCGTCGATCTAGCGGTTTTCCCCCAGATGGAGGATCAAGCGGCGGTGCAAGAAGCAGCGGCCTTAGGATTGAAGAGCATGGAAGAGCTAATCTGTATCTTATCGCATCAAATCAATCAGAGCCGCGTCGATCTCGGCCACCTCAATTGCTCTGAAATCACCGATTTCACCGTTTCTAAATTCAAGCAAGTCATTTCCATCCTTAACCGAACCGGCCACGCTCGCTTCCGCCGCGGACCGACGCTTCAACACCATTCCCCTCCCGGCATGGTTCATCCCACAGCTCAACCGGAGAAAGAGCTTCAGACCGATTTTTCATCTGTTTCGCCTCCGATCTCCTCAACGACGTCGTCATTTCCGTCATCTTTCGCCGGAGACGGCAGCGTTTCAAACTGGAAACGAGGATCTTGCGCGGCTTTACCTCAGGCTCCGGCGCAATCCGCCGGGAAACCGCCGCTGTCGTTGGGCAGTCGGAAACGGTGCCAGGATCACGTCGTCTCCTGTGACGCTCCCGGGAACATTTCATCCTCCTGCCGGTGCCATTGCGCTAAAAAAAGGAAATCGAAGGTTAAAAGGACCATCAGGGTTCCGGCGATCAGCTCTAGAATCGCCGATATACCGCCAGATGAGTATTCCTGGAGAAAATACGGGCAAAAGCCGATAAAAGGGTCGCCGTATCCACGAGGGTATTACAAGTGTAGTAGCGTGAGAGGTTGTCCAGCTAAGAAACACGTAGAGCGAGCCACAGACGATCCGACCATGCTCGTAGTAACTTACGAAGCCGGGCATCGTCACCCGCAGGCTCAACTGGGGGAGCCGGCGACAAAAGAGCGTTGA 840 54.4 MAVDLAVFPQMEDQAAVQEAAALGLKSMEELICILSHQINQSRVDLGHLNCSEITDFTVSKFKQVISILNRTGHARFRRGPTLQHHSPPGMVHPTAQPEKELQTDFSSVSPPISSTTSSFPSSFAGDGSVSNWKRGSCAALPQAPAQSAGKPPLSLGSRKRCQDHVVSCDAPGNISSSCRCHCAKKRKSKVKRTIRVPAISSRIADIPPDEYSWRKYGQKPIKGSPYPRGYYKCSSVRGCPAKKHVERATDDPTMLVVTYEAGHRHPQAQLGEPATKER 279
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 22147628 22148663 - Bpe009884.1 Bpe02g02063 100212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe02g02063 279 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 105 268 - -
Bpe02g02063 279 Pfam Plant zinc cluster domain 159 206 IPR018872 -
Bpe02g02063 279 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 105 268 IPR044810 GO:0003700
Bpe02g02063 279 SUPERFAMILY WRKY DNA-binding domain 206 268 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bpe02g02063 279 SMART WRKY_cls 208 268 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bpe02g02063 279 Pfam WRKY DNA -binding domain 210 266 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bpe02g02063 279 MobiDBLite consensus disorder prediction 77 124 - -
Bpe02g02063 279 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 7 106 - -
Bpe02g02063 279 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 7 106 IPR044810 GO:0003700
Bpe02g02063 279 Gene3D WRKY domain 194 269 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bpe02g02063 279 ProSiteProfiles WRKY domain profile. 203 269 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bpe02g02063 279 MobiDBLite consensus disorder prediction 100 124 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g02063 Bpe-Chr2:22147628 Bpe04g00024 Bpe-Chr4:230847 1.25E-85 dispersed
Bpe13g01093 Bpe-Chr13:16465233 Bpe02g02063 Bpe-Chr2:22147628 8.37E-113 wgd
Bpe02g00606 Bpe-Chr2:3946555 Bpe02g02063 Bpe-Chr2:22147628 3.71E-94 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21026 PF03106 WRKY 8.90E-25 CL0274 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe02g02063 - - csin:114311210 322.398