Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe02g02070 ATGGAAGCCCCAAGAAAAAAGGCTGCCCGCCAAGAATCTAAAAAATCTAATTCTAAAACAGAGTCTGGGAGTGAGTTCATTGAATCATTGAAATTCAGAAGGGACAGCAATGTATTCAAAAGTAAAAGGAAAAGACCAAGATCCAAAAGCAATGTACATAGATTGGATTCAAGCTTGATAGAAAAGGAAGTGGCTAAATCCTTGAACAAGTGGACCAAGAAGAATTCTGAACTGGGTGGTAAAAAAAGTCAGATTAAACAACTGAAAACAAATTCCTTGAAGAAGAAGTCTAATTTTAGGTTCCAGGATAAAAAATCCTGCTCGAGCGAGTTTGAAGGGAAAGCAAACAATGTTGTTGGGGAACAAAAGATGGATAACTTAAAGAAAAGGACGAGGAAAAGGAGGCAAACACGCAACGCAGAGCAAGACGAAGCTTGTCGCTTGCAGAGAAGAACTAGGTATCTAATGATCAAAATGAAGTTGGAGCAGAACCTCATTGACGCCTACTCTGGAGAAGGCTGGAAAGGCCAAAGTCGAGAAAAGATTAGGCCTGAAAATGAATTACAAAGAGCAAGGAAGCAGATTTTGAAATGTAAACTTGGAATTCGAGATGCAGTTCAGCAGCTAGATTCTCTGAGTTCAGTTGGATGTATTGAAGACTCTGTTATTGGTCCAGATGGATCCGTTTACCATGAACACATAATTTGTGCAAAATGCAAGTTGCGTGAAGCTTTTCCAGATAATGATATTATACTTTGTGATGGAACATGCAACTGCGCTTTCCACCAGAAATGTCTAGACCCACCTTTGGACACTAAACACATTCCTCCAGGAGATCAGGGCTGGTTTTGCAAATTTTGTGAGTGTAAGATGGAAATACTAGAGGCAATGAATGCACATCTTGGTACTCATTTCCCAATGGATAGTCGTTGGGAGGATATTTTCAAGGAAGATGCTGCTTTTCGTGATGGTGGAAATTCACTATTCAATCAAGAAGAAAACTGGCCATCTGATGATTCAGAAGATGATGATTATAATCCAGAGACAAGGGAAAAGAGCTACTGCGTTGATGAGATAGACAATAATGACAATTCTTCAGATCTCTTGAGCAGCTCTACAAGCTTGAGTTGGTCATTAGATGGTGAAATCTTTTCTGGAAAGGATGGCATTGACTTTGAAAATCTCTCTGTTCGTAGCCCTCTAGATTCTGATGAGTTCATTGAAGGCGAAGTTATTAGCGGGAGGAGACAGCGACATTCTGTTGATTATAGAAAGTTATATGACGAAATGTTTGGAAAGGAAGCTTCAATGTATGAACAAGTAAGTGAAGATGAAGATTGGGGTCCTGCAAAAAGAAAGAGGAGAGAGAAGGAGTCTGACGCAGCAAGCACCCTTATTACTCTTTATGAAAGTAAGCAAAAGACTCCAGCTCTGGGCATAGAAGTGAAAGATAAACTTCAAAACAAGACATCTTTCAGAATTCCTCGTCACGCAGTTCAGAAGCTTCGCCAAGTATTTGGAGAGAATGAACTTCCATCTAAAGCTGTCAAACAAAATCTTTCAGAAGAATTGGGCATCGATCCTGAGAAGGTCAACAAATGGTTCAAGAATGCACGATATGTTGCGCTCAAGGCAAGAAAGGCAGAGGGAACAAAACCTTTACTATCTCCAAGCAAGTCCGAGGAATTTAATGTTGAAGCAGTGCAGAAAGACGAAGGCGATAAATTGGCATCAAACAATGCTAAGAAAGATTGCTGGAGAAAGATGTCGAAGGCGACATCCAACCCTTCAAATAAAAAGCAGCACAAGAGAATCCTGCTTAGACCTTGCACCACTAGCAAGGATGATGAATTGGAGATTGGGGAAGATGACGAGAGCTTGAAGAAGCTTTTAGAAGAAAGGATGAAAGAGAAGAAGACAAAGAAGAAGAAAGGGAAGAAGAAGGGGAGAGGAAGAGGAAGTGGATACGAAGAGGCAGAAAAAGAGATGGAAAGAGTGTGTAAAATTAAGAGTAGATTAGAAAATATGAAGCAGGTTTTACTCAGATTTACAAACACCAAAAAACCACCCAAGAAATCACATAAATCAACTATGTTTCAACACTCTACTGTTTATGTGCCTGTTGCTCAGTTGAAGGAGAAAACTTGA 2148 39.9 MEAPRKKAARQESKKSNSKTESGSEFIESLKFRRDSNVFKSKRKRPRSKSNVHRLDSSLIEKEVAKSLNKWTKKNSELGGKKSQIKQLKTNSLKKKSNFRFQDKKSCSSEFEGKANNVVGEQKMDNLKKRTRKRRQTRNAEQDEACRLQRRTRYLMIKMKLEQNLIDAYSGEGWKGQSREKIRPENELQRARKQILKCKLGIRDAVQQLDSLSSVGCIEDSVIGPDGSVYHEHIICAKCKLREAFPDNDIILCDGTCNCAFHQKCLDPPLDTKHIPPGDQGWFCKFCECKMEILEAMNAHLGTHFPMDSRWEDIFKEDAAFRDGGNSLFNQEENWPSDDSEDDDYNPETREKSYCVDEIDNNDNSSDLLSSSTSLSWSLDGEIFSGKDGIDFENLSVRSPLDSDEFIEGEVISGRRQRHSVDYRKLYDEMFGKEASMYEQVSEDEDWGPAKRKRREKESDAASTLITLYESKQKTPALGIEVKDKLQNKTSFRIPRHAVQKLRQVFGENELPSKAVKQNLSEELGIDPEKVNKWFKNARYVALKARKAEGTKPLLSPSKSEEFNVEAVQKDEGDKLASNNAKKDCWRKMSKATSNPSNKKQHKRILLRPCTTSKDDELEIGEDDESLKKLLEERMKEKKTKKKKGKKKGRGRGSGYEEAEKEMERVCKIKSRLENMKQVLLRFTNTKKPPKKSHKSTMFQHSTVYVPVAQLKEKT 715
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 22216373 22221544 + Bpe009891.1 Bpe02g02070 100219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe02g02070 715 MobiDBLite consensus disorder prediction 547 610 - -
Bpe02g02070 715 PANTHER POLYCOMB PROTEIN PCL 4 687 - -
Bpe02g02070 715 Coils Coil 628 648 - -
Bpe02g02070 715 MobiDBLite consensus disorder prediction 327 349 - -
Bpe02g02070 715 Gene3D - 488 551 - -
Bpe02g02070 715 SUPERFAMILY FYVE/PHD zinc finger 226 293 IPR011011 -
Bpe02g02070 715 CDD PHD_PRHA_like 236 287 IPR045876 -
Bpe02g02070 715 CDD homeodomain 489 540 IPR001356 GO:0003677
Bpe02g02070 715 Coils Coil 656 676 - -
Bpe02g02070 715 MobiDBLite consensus disorder prediction 634 661 - -
Bpe02g02070 715 ProSiteProfiles Zinc finger PHD-type profile. 233 290 IPR019787 -
Bpe02g02070 715 PANTHER POLYCOMB-LIKE TRANSCRIPTION FACTOR 4 687 - -
Bpe02g02070 715 SMART PHD_3 235 288 IPR001965 -
Bpe02g02070 715 MobiDBLite consensus disorder prediction 1 26 - -
Bpe02g02070 715 MobiDBLite consensus disorder prediction 564 589 - -
Bpe02g02070 715 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 227 284 IPR013083 -
Bpe02g02070 715 SMART HOX_1 487 549 IPR001356 GO:0003677
Bpe02g02070 715 Pfam Homeodomain 496 539 IPR001356 GO:0003677
Bpe02g02070 715 SUPERFAMILY Homeodomain-like 487 545 IPR009057 -
Bpe02g02070 715 ProSiteProfiles 'Homeobox' domain profile. 485 545 IPR001356 GO:0003677
Bpe02g02070 715 MobiDBLite consensus disorder prediction 120 143 - -
Bpe02g02070 715 Pfam PHD-finger 235 290 IPR019787 -
Bpe02g02070 715 ProSitePatterns Zinc finger PHD-type signature. 236 287 IPR019786 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g02070 Bpe-Chr2:22216373 Bpe07g00262 Bpe-Chr7:1883715 2.37E-45 dispersed
Bpe02g02070 Bpe-Chr2:22216373 Bpe05g00488 Bpe-Chr5:19116348 9.28E-51 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21028 PF00628 PHD 3.40E-09 CL0390 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe02g02070 - - qlo:115986711 761.525