Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe02g02102 ATGCTTTCAGGATCCGGTTTAACCTCGTTTACTCTAACGTCGTTTGATGATTTTCATGCTCTGAATCGGATTCCGAAAGTTATGACGGTTACTGGAGTTTTGGAACCCGAAGAAGACGAGGAATCTCGGCCGGAATTTCCCTCCCCTGAACGGCGAATCGTCGTTTCGAACCAGTTGCCGATTCGAGCTTGTCGGGACGGGGAAACGGGAAAGTGGGGATTTGAGTTTGATCCCGATAGTCTGGTTTTGCAGCTGAAAGATGGGTTTTCACCGGAGGTGGAGGTGTTGTACGTCGGCTCTCTAAACGCCGATATCGACGTTTCGGAACAAGATCGGGTTTCTCAAGATCTTCTTGAGAATTTCCGTTGTGTTCCGACGTTCCTGCCCTCTGAGATTCAAAATAAGTTTTATCATGGGTTTTGTAAGCATTATCTATGGCCTCTGTTTCACTATATGTTACCTTTATCTCCGACGAACGGCGAAAAGTTCAACCGGGAAAATTGGCAAGCTTACGTATCTGCCAATAAGATTTTCGCCGACAAAATCATGGAGGTGATTAACCCTGACGATTACGTTTGGATTCATGATTATCATCTGATGATTTTGCCAACGCTTTTGAGAAGGAGGTTCCACCGGTTTAAGCTCGGATTCTTCCTGCATAGCCCGTTTCCATCGTCGGAAATTTACCGAACTCTGCCCGTGAGAGAAGAGATTTTGCGAGCACTTTTGAATTCCGATCTGATAGGATTTCACACGTTCGATTATGCCAGACATTTTCTGTCGTGCTGCAGCAGAATGTTGGGTCTTGATTATGAATTGAAACGGGGTTACATCGGGCTCGATTATTACGGCAGAACAGTGAGTATCAAGATTCTTCCCGTCGGAATTCACATGGGACAGCTTGAACTTGTTCTGTCGCTTCCGTCCACCGCCGACAAAATCAGGGAACTAAGCGACAGATTCAGAGGCAAAACAGTGTTGTTGGGAGTAGACGACATGGATTTGTTCAAAGGAATCAGTTTCAAACTTCTCGCCATGAAGCAATTATTAGAACAGAGGAGCGATTTGAGAAGAAAAGTTGTTCTGATTCAGATTACAAACCCGGCGAGAAGCAGAGGAAGAGATGTTGAAGATGTAGAAAATGAGATCAAAGCAGAAGCTAATGAGATAAACAGGAAATTCGGCGAAGAACAATATCAGCCTATAATTCTCATCAACGGCCCCATTCCATCCTTTGAAAAAGCTGCATATTACGCCATTGCTGAATGCTGCGTAGTAAATGCTGTTCGAGATGGGATGAACTTAGTCCCGTACGAATATACCGTATGCAGACAACGAAATCCGGCTTTGAACAAAGCACTACTGATCGACGAAACTTTGCAGCCTCGAAAAAGCGTTCTAATCGTCTCTGAATTCATTGGCTGCTCCCCATCGCTAAGCGGAGCAGTTCGAGTCAATCCGTGGAACATCGAGGCTGTTTCTGACGCTCTGAACTCGGCAATAACAATGAAGGAGATAGAGAAAGAATTGAGACATGAAAAACATTACAAGTACATAAGTTCCCACGATGTTTCTTATTGGGCGAAGAGTTTTGATCAAGATCTCGAAAGGGCGTGTAGAGATCATTACCAAAAAAGGTGTTGGGGGATTGGATTCGGATTAGGGTTTCGGGTCGTCGCATTAGGACCTCATTTTAGGAAACTCTCTGTTGATCATATTGTTTATGCTTATCAGAAAACTGAAAACAGGCTGATTCTTCTGGATTATGATGGAACTGTAATGCCAAATGGATCTGTCGATAAAGCTCCTAGCAGCCAAGTTATTTCTGTATTGAACTGTCTCTGCAGTGACCCTAAAAATGTGGTTTTTATTGTGAGTGGCAGAGGAAAAGATTCTCTGGGCAAATGGTTCTCGACGGTGGAGAAACTGGGTATTTCTGCAGAGCATGGCTACTTCACCAGGTGGTCGTCTGATAAGCCATGGGAGACCTGCTCTTTGTCCATGAACTTTGACTGGATGCAAATTGCAGAGCCAGTAATGGCTCTTTACGCGGAAGCTACCGATGGTTCATTCATCGAAAAGAAGGAAAGCGCGTTAGTTTGGCATCATCGAGAAGCCGACCCTCATTTCGGCTCTTCACAAGCAAAAGACCTTCTTGATCATCTGGAGAACGTCCTTGCTAATGAACCGGTCGTCGTCAAGCATGGCCAACACATTGTCGAAGTTAAACCACAGGGTGTGAGCAAAGGGGTAGTTGTGAAGGGTCTAATCTCTTCATTGGAAAGAAAGGGTGTTTGTCCAGATTTCGTTTTGTGCATAGGCGACCACAGATCGGATGAAGATATGTTTACATGCATATCAAATTCAATAACCAATCCACCACTGCCAGCCATATCAGAGGTTTTTGCCTGCACAGTCGGTCAAAAACCAAGCATGGCAAAATACTATCTCGACGATACATCCGAGGTCATTAAGTTGCTGGAGGGCCTTGCCAGTTCTTCACAACCCAAGTTACATCCATTTGAATGTGAAACTGTTTTAAGGTAG 2547 44.56 MLSGSGLTSFTLTSFDDFHALNRIPKVMTVTGVLEPEEDEESRPEFPSPERRIVVSNQLPIRACRDGETGKWGFEFDPDSLVLQLKDGFSPEVEVLYVGSLNADIDVSEQDRVSQDLLENFRCVPTFLPSEIQNKFYHGFCKHYLWPLFHYMLPLSPTNGEKFNRENWQAYVSANKIFADKIMEVINPDDYVWIHDYHLMILPTLLRRRFHRFKLGFFLHSPFPSSEIYRTLPVREEILRALLNSDLIGFHTFDYARHFLSCCSRMLGLDYELKRGYIGLDYYGRTVSIKILPVGIHMGQLELVLSLPSTADKIRELSDRFRGKTVLLGVDDMDLFKGISFKLLAMKQLLEQRSDLRRKVVLIQITNPARSRGRDVEDVENEIKAEANEINRKFGEEQYQPIILINGPIPSFEKAAYYAIAECCVVNAVRDGMNLVPYEYTVCRQRNPALNKALLIDETLQPRKSVLIVSEFIGCSPSLSGAVRVNPWNIEAVSDALNSAITMKEIEKELRHEKHYKYISSHDVSYWAKSFDQDLERACRDHYQKRCWGIGFGLGFRVVALGPHFRKLSVDHIVYAYQKTENRLILLDYDGTVMPNGSVDKAPSSQVISVLNCLCSDPKNVVFIVSGRGKDSLGKWFSTVEKLGISAEHGYFTRWSSDKPWETCSLSMNFDWMQIAEPVMALYAEATDGSFIEKKESALVWHHREADPHFGSSQAKDLLDHLENVLANEPVVVKHGQHIVEVKPQGVSKGVVVKGLISSLERKGVCPDFVLCIGDHRSDEDMFTCISNSITNPPLPAISEVFACTVGQKPSMAKYYLDDTSEVIKLLEGLASSSQPKLHPFECETVLR 848
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 22492674 22495399 + Bpe009923.1 Bpe02g02102 100251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe02g02102 848 Gene3D Glycogen Phosphorylase B; 305 520 - -
Bpe02g02102 848 TIGRFAM T6PP: trehalose-phosphatase 582 831 IPR003337 GO:0003824|GO:0005992
Bpe02g02102 848 Pfam Glycosyltransferase family 20 51 536 IPR001830 GO:0003824|GO:0005992
Bpe02g02102 848 Gene3D - 585 817 IPR023214 -
Bpe02g02102 848 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 8 836 IPR001830 GO:0003824|GO:0005992
Bpe02g02102 848 CDD HAD_TPP 584 825 - -
Bpe02g02102 848 Gene3D Glycogen Phosphorylase B; 39 304 - -
Bpe02g02102 848 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 51 540 - -
Bpe02g02102 848 Pfam Trehalose-phosphatase 586 821 IPR003337 GO:0003824|GO:0005992
Bpe02g02102 848 PANTHER ALPHA,ALPHA-TREHALOSE-PHOSPHATE SYNTHASE [UDP-FORMING] 11-RELATED 8 836 - -
Bpe02g02102 848 Gene3D - 665 745 - -
Bpe02g02102 848 SUPERFAMILY HAD-like 583 830 IPR036412 -
Bpe02g02102 848 Coils Coil 376 396 - -
Bpe02g02102 848 CDD GT20_TPS 51 536 IPR001830 GO:0003824|GO:0005992
Bpe02g02102 848 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 584 784 IPR006379 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g02102 Bpe-Chr2:22492674 Bpe13g01196 Bpe-Chr13:17326376 0 dispersed
Bpe02g02102 Bpe-Chr2:22492674 Bpe07g00231 Bpe-Chr7:1639176 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe02g02102 K16055 - pvy:116113190 1259.59