Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe02g02103 ATGAAACTATTTCACTTACTCGCGGCAATCGAGGACAGTTCCATTGACTTTGGCGACTTTTTCAAAGGTCCATTGCCTGGCAAATTTCTCAAGCTATTGGGGTATTTAGCGTTATCCAGGCTTGGAATATATGTACCTCTTGGTGGGGTAAATAGAGAGGCTTTTGTCGGAAATTTGGATCAGAACAGTTTATTGAGCACATTGGATTCATTTTCTGGTGGGGGAATTGGAAGATTAGGAGTCTGCTCACTTGGTATTGTTCCTTTCATTAATGCTTCGATTGTCTTCCAACTTCTGGCTCAGATCTATCCGAAGTTGCAGGAGCTTCAGAAAAGAGAAGGAGAAGCTGGAAGGAAGAAGATTCTTCAGTACACTCGATATGCTTCAGTTGGATTCGCCATTGTACAAGCAATTGGTCAAGTACTATTTCTCCGCCCCTATGCCAATGACTTCAGCACACAGTGGGTTCTGTCCTCAGTCATTTTACTGACACTTGGCTCTGTTTTAACAACATATATTGGAGAGCGAATCACAGACTTGAAACTTGGAAATGGCACGTCACTTTTAATTTTCACTAGCATTATCTCCTACTTACCAGCATCTTTGGGTAGGACAACAGCACAGGCATTTCAGGATGGTAACTACATTGGACTTCTTGCCATTCTTGCATCCTTTTTTCTGCTGGTTCTTGGTATTGTTTATGTTCAGGAAGCAGAAAGGAAAATTCCTATTAACTATGCATCAAGATATACAAGTAGAACTGGAGGGCTTGAAAGGTCTGCTTATCTACCCTTCAAGGTGAATAGCTCTGGAGTTATGCCTATCATATTTTCGACGTCGTCATTAGCACTTCCGGGTACATTAGCACGTTTCACAGGCTTAGCTGTGCTAAAGAAGGCAGCAATTTCTTTAAATCCCGGGGGTTCTCTTTATCTCCCCACCAACATTCTTCTTATAGCCTTCTTCAACTACTACTACACTTTTCTCCAGTTGGACCCTGATGATGTGAGTGAACAGTTGAAGCGCCAAGGTGCTTCAATTCCACTCGTCCGCCCTGGTAAAAGCACTGCTGCATTCATTAAAACGGTTCTAAGTCGAATATCAGTTCTCGGATCAGCCTTCTTGGCAATTCTTGCTGCTGGGCCCGCTGTGATTGAGCAAACTACACATCTCACTGCATTTCGAGGTTTCGCAGGCACGTCTGTTCTCATCCTTGTCGGTTGTGCTACTGACACTGCAAGGAAAGTGCAGGCCGAGATAATATCCCAGAAGTACAAAAACATCGAGCTATACGACTTCGATAAATACGGCTCCTAA 1317 43.36 MKLFHLLAAIEDSSIDFGDFFKGPLPGKFLKLLGYLALSRLGIYVPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGVCSLGIVPFINASIVFQLLAQIYPKLQELQKREGEAGRKKILQYTRYASVGFAIVQAIGQVLFLRPYANDFSTQWVLSSVILLTLGSVLTTYIGERITDLKLGNGTSLLIFTSIISYLPASLGRTTAQAFQDGNYIGLLAILASFFLLVLGIVYVQEAERKIPINYASRYTSRTGGLERSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGLAVLKKAAISLNPGGSLYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFIKTVLSRISVLGSAFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNIELYDFDKYGS 438
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 22495766 22500354 - Bpe025200 Bpe02g02103 100252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe02g02103 438 PIRSF SecY_Sec61alpha 4 437 IPR002208 GO:0015031|GO:0016020
Bpe02g02103 438 PANTHER PREPROTEIN TRANSLOCASE SUBUNIT SCY1, CHLOROPLASTIC 8 434 - -
Bpe02g02103 438 Gene3D SecY subunit domain 20 425 IPR023201 -
Bpe02g02103 438 SUPERFAMILY Preprotein translocase SecY subunit 21 419 IPR023201 -
Bpe02g02103 438 TIGRFAM 3a0501s007: preprotein translocase, SecY subunit 28 425 IPR002208 GO:0015031|GO:0016020
Bpe02g02103 438 ProSitePatterns Protein secY signature 2. 172 189 IPR030659 -
Bpe02g02103 438 Hamap Protein translocase subunit SecY [secY]. 17 429 IPR026593 -
Bpe02g02103 438 PANTHER SECY/SEC61-ALPHA FAMILY MEMBER 8 434 IPR002208 GO:0015031|GO:0016020
Bpe02g02103 438 Pfam SecY 81 412 IPR002208 GO:0015031|GO:0016020
Bpe02g02103 438 ProSitePatterns Protein secY signature 1. 80 99 IPR030659 -
Bpe02g02103 438 PRINTS Preprotein translocase SecY subunit signature 364 382 - -
Bpe02g02103 438 PRINTS Preprotein translocase SecY subunit signature 79 99 - -
Bpe02g02103 438 PRINTS Preprotein translocase SecY subunit signature 398 416 - -
Bpe02g02103 438 PRINTS Preprotein translocase SecY subunit signature 121 144 - -
Bpe02g02103 438 PRINTS Preprotein translocase SecY subunit signature 153 178 - -
Bpe02g02103 438 PRINTS Preprotein translocase SecY subunit signature 270 289 - -
Bpe02g02103 438 PRINTS Preprotein translocase SecY subunit signature 179 202 - -
Bpe02g02103 438 PRINTS Preprotein translocase SecY subunit signature 29 47 - -
Bpe02g02103 438 PRINTS Preprotein translocase SecY subunit signature 309 331 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g02103 Bpe-Chr2:22495766 Bpe11g00212 Bpe-Chr11:1440845 1.62E-42 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe02g02103 K10956 - csin:114311491 773.081