Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe02g02124 ATGCTGCCTTCTAGCAGAGATATGACTCAAGAACTCCTCAGCAATCACCTCCAGATCCAACCCTCCAACTTGCTTTTTCATCACACCTCTCACTTGGAGCCATCTTCTATCCACGACGATTTTCTAGAGCAGATGTTCTCAACCATCTCCTCATCTACTTGGCCTGACCTCAATCCTGCCATCAATTCCGTCGGCAAGCTCAGAGACTTCTCCAACGAAACTCCCCTGCCGAATCCTGAAAATGGTGGCTACTCGTATGACGAGTCGGTAAACTTGGCCTCGAAGCTCCGAAGCCACCAGATCAGCGGGAGCTCTCCGGCTGTAAAAGCGGCGGCGATGATGCTTCAGCAGCACTTCTTGATGTCCAGAGGAGTTGCCGGGGCTGGAGATGGTAACTCATCTGGACTTTTCCCGATGCCTTTATCTATGGAGCCGCCACAAGATGAAGTCACTGATGGCTTGTCTACATTTAAATCTCATAATCCAGGTGGTGATCAAGCTCTCTACAATGGATTCGCCGCCCAGACGTTGAATCATCCACAACATTTGCAGCCTCATCAGTCGCAAAACCATGGAACTTCAGGTTCGGCGATCAACCGAGTTCCAAGTGGTGGCTCAAACGGGGCCACGGAGGCTCAGCCTCGACAGCGAGTGAGGGCTCGGAGAGGTCAAGCTACTGATCCTCACAGCATCGCTGAAAGATTGAGGAGGGAGAGAATTGCAGAGAGAATGAAAGCTCTGCAAGAACTTGTTCCTAACGCCAACAAGACCGACAAGGCTTCCATGCTGGATGAGATCATCGATTACGTTAAATTCCTACAGCTTCAAGTCAAGGTTCTTAGTGTGAGCAGATTAGGGAGCGCGGCTGATGTTGCTCCGCTTGTCGCCGATGTGTCTTCCGAGGGAGGAGGTGACTGCGTCCGGGCCGGTGGAAACGGTGGGACACCGGGCCGCCAGGGCGGAGCTCAGACAACGACCGGAAATGGCGGCCTAACTGCGACGGAGCACCAGGTAGCTAGAATGATGGAGGAGGATATGGGGTCCGCCATGCAGTATTTGCAAGGGAAGGGCCTCTGCTTGATGCCAATTTCTCTTGCCACTGCGATTTCTACTGCCACGTGTCATTCGAGGAATCCAGTCATTAGTGGCCGTTCGGGCATCTTGTCCGACGTGGAAGGACCATCCTCCCCTAACATGTCTGCTCCGACCGTCCAGTCAGCAGTCTTAGTCAACCGCATTAGTGACCTCACCGTCAAAGACGCCGCTTCCATTTCAAAGGCATGA 1284 52.96 MLPSSRDMTQELLSNHLQIQPSNLLFHHTSHLEPSSIHDDFLEQMFSTISSSTWPDLNPAINSVGKLRDFSNETPLPNPENGGYSYDESVNLASKLRSHQISGSSPAVKAAAMMLQQHFLMSRGVAGAGDGNSSGLFPMPLSMEPPQDEVTDGLSTFKSHNPGGDQALYNGFAAQTLNHPQHLQPHQSQNHGTSGSAINRVPSGGSNGATEAQPRQRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSVSRLGSAADVAPLVADVSSEGGGDCVRAGGNGGTPGRQGGAQTTTGNGGLTATEHQVARMMEEDMGSAMQYLQGKGLCLMPISLATAISTATCHSRNPVISGRSGILSDVEGPSSPNMSAPTVQSAVLVNRISDLTVKDAASISKA 427
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 22621844 22624231 - Bpe009941.1 Bpe02g02124 100273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe02g02124 427 MobiDBLite consensus disorder prediction 215 230 - -
Bpe02g02124 427 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 32 384 - -
Bpe02g02124 427 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 222 282 IPR036638 GO:0046983
Bpe02g02124 427 MobiDBLite consensus disorder prediction 182 213 - -
Bpe02g02124 427 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 224 273 IPR011598 GO:0046983
Bpe02g02124 427 Pfam Helix-loop-helix DNA-binding domain 229 274 IPR011598 GO:0046983
Bpe02g02124 427 PANTHER TRANSCRIPTION FACTOR BHLH69 32 384 - -
Bpe02g02124 427 SMART finulus 230 279 IPR011598 GO:0046983
Bpe02g02124 427 MobiDBLite consensus disorder prediction 182 230 - -
Bpe02g02124 427 Gene3D - 219 281 IPR036638 GO:0046983
Bpe02g02124 427 MobiDBLite consensus disorder prediction 144 168 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe01g00640 Bpe02g02124 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g02124 Bpe-Chr2:22621844 Bpe11g01332 Bpe-Chr11:9959231 1.24E-56 dispersed
Bpe01g00640 Bpe-Chr1:4315263 Bpe02g02124 Bpe-Chr2:22621844 1.51E-122 wgd
Bpe13g01167 Bpe-Chr13:17101286 Bpe02g02124 Bpe-Chr2:22621844 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21030 PF00010 HLH 1.60E-09 No_clan Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe02g02124 - - jre:109000831 442.195