Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe02g02129 ATGACGACCTGCATCAATGTTGCGCCTGAGCAACTCTGCTATATACCCTGCAACTTTTGCAATATTGTTCTTGCGGTGAGTGTTCCATGCAACAATTTGTTTGACATTGTCACAGTCCGATGTGGTCACTGCACAAATCTCTGGTCCGTGAACATGGCTTCTGCGTTTCAATCACTTTCATGGCAAGATCCTCAGGTTCAAAATTACTCTTACAATCCACCCGATCATTGTCGAAATGACTCCGGTTCTTCGTCGAAATGCAACAACAAGATGACACTTCGTCCTCCAACCAAAACTTCCACCGAGCAAAGACTCACTAACCGACCTCCCGAGAAGAGGCAGAGAGTACCTTCTGCATATAATCAGTTCATAAAGGAAGAGATTCAGAGGATCAAGGCGAACAACCCAGATATTACCCACAGGGAAGCATTCAGTACTGCTGCAAAAAATTGGGCACATTTTCCTCATATTCACTTTGGACTGATGCTAGAAACTAATAACCAGACCAAGGCAGATCACTCAGTAAGTGTTTGGTTAAATCCTAGTAATATTAAATATTCAGAGTTGAGAAAATATTCATTTTTGAATTTTAATTAA 597 41.37 MTTCINVAPEQLCYIPCNFCNIVLAVSVPCNNLFDIVTVRCGHCTNLWSVNMASAFQSLSWQDPQVQNYSYNPPDHCRNDSGSSSKCNNKMTLRPPTKTSTEQRLTNRPPEKRQRVPSAYNQFIKEEIQRIKANNPDITHREAFSTAAKNWAHFPHIHFGLMLETNNQTKADHSVSVWLNPSNIKYSELRKYSFLNFN 198
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 22651365 22653691 - Bpe009946.1 Bpe02g02129 100278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe02g02129 198 Pfam YABBY protein 8 161 IPR006780 GO:0007275
Bpe02g02129 198 SUPERFAMILY HMG-box 97 154 IPR036910 -
Bpe02g02129 198 MobiDBLite consensus disorder prediction 79 115 - -
Bpe02g02129 198 Gene3D High mobility group box domain 97 156 IPR036910 -
Bpe02g02129 198 MobiDBLite consensus disorder prediction 79 104 - -
Bpe02g02129 198 PANTHER PROTEIN YABBY 6-RELATED 1 174 IPR006780 GO:0007275
Bpe02g02129 198 PANTHER AXIAL REGULATOR YABBY 5 1 174 - -
Bpe02g02129 198 CDD HMG-box 115 151 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe01g00747 Bpe02g02129 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g02129 Bpe-Chr2:22651365 Bpe05g00592 Bpe-Chr5:19976884 3.44E-53 dispersed
Bpe01g00747 Bpe-Chr1:6729826 Bpe02g02129 Bpe-Chr2:22651365 2.14E-91 transposed
Bpe13g01156 Bpe-Chr13:17012747 Bpe02g02129 Bpe-Chr2:22651365 1.08E-80 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21031 PF04690 YABBY 1.90E-69 CL0114 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe02g02129 K25796 - pvy:116130315 294.664