Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe02g02140 | ATGTCCATCACGATCACCAACGGGATGCACACCGAGCAAGACTCTTTCATCGTCCCCTTACTGTCTTCTCAAAGATCGGCCACTAACTGTTCCTCTCAGGTTGCCATTGTTGGTGCTAAAGTCTGCCCCATTGAGAGCCTCGACTACGAGATTTTTGAGAATGAAATCTTCAAGCAGGATTGGAGGAGCCGTAGGAAGTTGCAGATTTTTGAGTTTACATTCATGAAGTGGATTTTGTGCTTCTTGATTGGTCTGGTAGTTAGCGTTATTGGTTTCTGTAATAATCTTTCGGTTGAGAATATTGCTGGTGTGAAATTCGTTGTCACCTCCAATATGATGCTTGAGGATAGGTACCCAACTCAATTTGATTTGTCTCTTCCTAGCATTCAGATTTTCCCTGCATTTAAATGGTTGAATAATTTCAACTTTTCTTTCAGGTATTGGATGGCCTTTCTTGTTTTTTCTGTTTCCAATTTGGTTCTCACTCTATTTGCAGTAGTGATCACGGCATTGATCTCACCAACAGCAGCTGGTTCAGGTATACCAGAAGTAAAAGCCTATTTGAATGGTGTAGATGCACCCAGAATTTTTTCAATAAAAACATTAGTAGTTAAGGTAGTAGGCAGCATTTCTGTTGCATCATCATCTTTGCTAGTAGGAAAGGCAGGACCTATGGTGCATACTGGTGCTTGCATTGCTTCTCTCCTAGGTCAGGGAGGGTCAACAAAATATCATTTGACGTGGAGATTTCTTAGATATTTCAAGAACGACAGAGATAGGCGCGATCTTATAACATGCGGAGCAGCTGCTGGAATTGCGGCTGCTTTTCGTGCTCCTGTGGGTGGTTTACTGTTTGCTTTCGAAGAGATGGTATCTTGGTGGCGAAGTGCTCTTTTATGGCGAGCATTTTTCACAACTGCAGTAGTTGCAATTATATTGCGCTCTTTAATTGACGTGTGCTTTAGTGGGAAATGTGGACTATTTGGTACTGGGGGTCTGATAATGTTTGATGTCTATTCAGAAACTGTTTCATATCACCTACTGGATGTGCCTTCTGTGCTTGTCCTTGGAGTTGTAGGAGGTATACTTGGAAGCCTATTTAACTTCATTTTGGGTAAAGTCCTTCGAATTTACAGTCTCGTGAATGAGAAAGGCTTTGTATACAAGATACTGCTTGCTTGCGCCGTCTCAATTTTCACATCCTGTCTTCTTTTCGGATTACCTTGGCTTGCAACTTGCCAAGCTTGCCCAACTAGCTCGTCAGAAGAGTGTCCTACAATTGGAAGATCAGGAAACTACAAGAAGTTTCAATGTCCAGCTCATCACTACAATGATCTTGCAAGTCTTATATTCAACACCAGCGATGATGCAATAAAAAATCTCTTCAGCAAAGATACCGACTCGGAGTTTCAATTCTCGTCAGTTATCATCTTTTTCATCGCTTGCTATTTCTTAAGCATCATCAGCTACGGAGTTGTTGCTCCAATTGGTTTATTCATCCCTGTTATTGTGACGGGTGCTTCCTATGGACGTTTAATTGGAATGTTACTTGGCTCACACTCGAAGCTTAACCATGGCCTTTTTGCTGTACTGGGTGCGGCTTCATTGCTCGGGGGTACGATGAGAATGACGGTTTCTCTCTCTGTCATCATCCTGGAACTGACCAACAATCTCTTGTTGCTTCCTTTGATAATGGTGGTTTCTCTCATCTCCAAAACCGTAGCCGACGCTTTCAATAGTAATATTTATGATCAAATGTTGAAAGCCAAAGGGTTTCCTTATCTCGAATCCCATGCAGAGCCGTACATGAGGCAGCTGATGGTCAGTGACGTTGTGATGGGCCCACTTCAAATATTTCAAGGGATCGAGAAAGTGAGTAACATAGTACATGTTCTTAGAACGACAAGACATCATGGTTTTCCTGTCGTTGATGAGCCTCCTTTCTCCCAATCCCCTGTTCTGTTTGGCATCGTTCTTCGAGCCCATTTGGTTACGTTGTTAAAGAAGAAAGCTTTTATAGCTACAACAGTGCCAGTCGATGTCAATACCTATACGCAATTGTTGGCTGGGGATTTTGCGAAAAGAGGCTCGAATAACACCGAGAATATCGAGGATGTGGAGTTGACAGAGGAAGAGATGGAGATGTTCATCGACCTGCATCTGTTCAGTAATGCTTCACCTTATACTGTTGTGGAGACGATGTCGTTAGCAAAGGCGCTCATTCTTTTCCGTCAAGTTGGATTGAGGCATATGCTTGTCGTTCCCAAAGTTTCTGGGAGATCACCAGTTGTGGGCATATTAACGAGGCATGATTTCATGTCGGAACACATATTGAGCCTGTATCCTTCGCTCGTGAAAAGCAAGTGGAAGAGACTGCGAATCAAGATTCCGGATTTTAGGCAATACTTTAAATGA | 2415 | 42.69 | MSITITNGMHTEQDSFIVPLLSSQRSATNCSSQVAIVGAKVCPIESLDYEIFENEIFKQDWRSRRKLQIFEFTFMKWILCFLIGLVVSVIGFCNNLSVENIAGVKFVVTSNMMLEDRYPTQFDLSLPSIQIFPAFKWLNNFNFSFRYWMAFLVFSVSNLVLTLFAVVITALISPTAAGSGIPEVKAYLNGVDAPRIFSIKTLVVKVVGSISVASSSLLVGKAGPMVHTGACIASLLGQGGSTKYHLTWRFLRYFKNDRDRRDLITCGAAAGIAAAFRAPVGGLLFAFEEMVSWWRSALLWRAFFTTAVVAIILRSLIDVCFSGKCGLFGTGGLIMFDVYSETVSYHLLDVPSVLVLGVVGGILGSLFNFILGKVLRIYSLVNEKGFVYKILLACAVSIFTSCLLFGLPWLATCQACPTSSSEECPTIGRSGNYKKFQCPAHHYNDLASLIFNTSDDAIKNLFSKDTDSEFQFSSVIIFFIACYFLSIISYGVVAPIGLFIPVIVTGASYGRLIGMLLGSHSKLNHGLFAVLGAASLLGGTMRMTVSLSVIILELTNNLLLLPLIMVVSLISKTVADAFNSNIYDQMLKAKGFPYLESHAEPYMRQLMVSDVVMGPLQIFQGIEKVSNIVHVLRTTRHHGFPVVDEPPFSQSPVLFGIVLRAHLVTLLKKKAFIATTVPVDVNTYTQLLAGDFAKRGSNNTENIEDVELTEEEMEMFIDLHLFSNASPYTVVETMSLAKALILFRQVGLRHMLVVPKVSGRSPVVGILTRHDFMSEHILSLYPSLVKSKWKRLRIKIPDFRQYFK | 804 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 22738391 | 22742992 | - | Bpe009958.1 | Bpe02g02140 | 100289 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe02g02140 | 804 | PRINTS | Chloride channel signature | 174 | 191 | IPR001807 | GO:0005247|GO:0006821|GO:0016020|GO:0055085 | |
Bpe02g02140 | 804 | PRINTS | Chloride channel signature | 526 | 542 | IPR001807 | GO:0005247|GO:0006821|GO:0016020|GO:0055085 | |
Bpe02g02140 | 804 | PRINTS | Chloride channel signature | 544 | 563 | IPR001807 | GO:0005247|GO:0006821|GO:0016020|GO:0055085 | |
Bpe02g02140 | 804 | PRINTS | Chloride channel signature | 582 | 596 | IPR001807 | GO:0005247|GO:0006821|GO:0016020|GO:0055085 | |
Bpe02g02140 | 804 | PRINTS | Chloride channel signature | 205 | 224 | IPR001807 | GO:0005247|GO:0006821|GO:0016020|GO:0055085 | |
Bpe02g02140 | 804 | PRINTS | Chloride channel signature | 269 | 288 | IPR001807 | GO:0005247|GO:0006821|GO:0016020|GO:0055085 | |
Bpe02g02140 | 804 | PRINTS | Chloride channel signature | 494 | 514 | IPR001807 | GO:0005247|GO:0006821|GO:0016020|GO:0055085 | |
Bpe02g02140 | 804 | SMART | cbs_1 | 726 | 777 | IPR000644 | - | |
Bpe02g02140 | 804 | SMART | cbs_1 | 615 | 668 | IPR000644 | - | |
Bpe02g02140 | 804 | CDD | CBS_pair_voltage-gated_CLC_euk_bac | 598 | 775 | - | - | |
Bpe02g02140 | 804 | Gene3D | - | 597 | 775 | IPR046342 | - | |
Bpe02g02140 | 804 | PRINTS | Plant CLC chloride channel signature | 304 | 314 | IPR002251 | GO:0005247|GO:0006821|GO:0016020 | |
Bpe02g02140 | 804 | PRINTS | Plant CLC chloride channel signature | 50 | 58 | IPR002251 | GO:0005247|GO:0006821|GO:0016020 | |
Bpe02g02140 | 804 | PRINTS | Plant CLC chloride channel signature | 446 | 462 | IPR002251 | GO:0005247|GO:0006821|GO:0016020 | |
Bpe02g02140 | 804 | PRINTS | Plant CLC chloride channel signature | 290 | 298 | IPR002251 | GO:0005247|GO:0006821|GO:0016020 | |
Bpe02g02140 | 804 | PRINTS | Plant CLC chloride channel signature | 322 | 329 | IPR002251 | GO:0005247|GO:0006821|GO:0016020 | |
Bpe02g02140 | 804 | SUPERFAMILY | CBS-domain pair | 598 | 774 | IPR046342 | - | |
Bpe02g02140 | 804 | Pfam | CBS domain | 726 | 774 | IPR000644 | - | |
Bpe02g02140 | 804 | SUPERFAMILY | Clc chloride channel | 54 | 598 | IPR014743 | - | |
Bpe02g02140 | 804 | PANTHER | CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER | 10 | 796 | - | - | |
Bpe02g02140 | 804 | ProSiteProfiles | CBS domain profile. | 722 | 783 | IPR000644 | - | |
Bpe02g02140 | 804 | Pfam | Voltage gated chloride channel | 162 | 576 | IPR001807 | GO:0005247|GO:0006821|GO:0016020|GO:0055085 | |
Bpe02g02140 | 804 | Gene3D | Clc chloride channel | 68 | 596 | - | - | |
Bpe02g02140 | 804 | PANTHER | CHLORIDE CHANNEL PROTEIN | 10 | 796 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe02g02140 | Bpe-Chr2:22738391 | Bpe13g01153 | Bpe-Chr13:16981922 | 0 | dispersed | |
Bpe02g02140 | Bpe-Chr2:22738391 | Bpe05g00733 | Bpe-Chr5:20807724 | 0 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe02g02140 | K05016 | - | jre:108995632 | 1168.68 |